RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 NISCHQ9Y2I1 1504 aa25.7■■□□□ 1.71
SLC47A1-201ENST00000270570 SHROOM4Q9ULL8 1493 aa23.31■■□□□ 1.32
SLC47A1-201ENST00000270570 SUPT5HO00267 1087 aaKnown RBP23.02■■□□□ 1.28
SLC47A1-201ENST00000270570 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
SLC47A1-201ENST00000270570 PCGF6Q9BYE7 350 aa21.97■■□□□ 1.11
SLC47A1-201ENST00000270570 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
SLC47A1-201ENST00000270570 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
SLC47A1-201ENST00000270570 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
SLC47A1-201ENST00000270570 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
SLC47A1-201ENST00000270570 EHMT2Q96KQ7 1210 aa21.72■■□□□ 1.07
SLC47A1-201ENST00000270570 ZCCHC6Q5VYS8 1495 aaKnown RBP21.67■■□□□ 1.06
SLC47A1-201ENST00000270570 HRCP23327 699 aa21.64■■□□□ 1.05
SLC47A1-201ENST00000270570 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
SLC47A1-201ENST00000270570 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
SLC47A1-201ENST00000270570 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
SLC47A1-201ENST00000270570 TRIM26Q12899 539 aaPredicted RBP21■□□□□ 0.95
SLC47A1-201ENST00000270570 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
SLC47A1-201ENST00000270570 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
SLC47A1-201ENST00000270570 DCAF1Q9Y4B6 1507 aa20.79■□□□□ 0.92
SLC47A1-201ENST00000270570 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
SLC47A1-201ENST00000270570 ABCC9O60706 1549 aa20.62■□□□□ 0.89
SLC47A1-201ENST00000270570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.6■□□□□ 0.89
SLC47A1-201ENST00000270570 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
SLC47A1-201ENST00000270570 CCER1Q8TC90 406 aaPredicted RBP20.49■□□□□ 0.87
SLC47A1-201ENST00000270570 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
SLC47A1-201ENST00000270570 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
SLC47A1-201ENST00000270570 RANGAP1P46060 587 aaPredicted RBP20.37■□□□□ 0.85
SLC47A1-201ENST00000270570 PELP1Q8IZL8 1130 aaKnown RBP20.32■□□□□ 0.84
SLC47A1-201ENST00000270570 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
SLC47A1-201ENST00000270570 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
SLC47A1-201ENST00000270570 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
SLC47A1-201ENST00000270570 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
SLC47A1-201ENST00000270570 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.81
SLC47A1-201ENST00000270570 WIZO95785 1651 aa20.1■□□□□ 0.81
SLC47A1-201ENST00000270570 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
SLC47A1-201ENST00000270570 DIEXFQ68CQ4 756 aaKnown RBP20.05■□□□□ 0.8
SLC47A1-201ENST00000270570 NEUROD1Q13562 356 aa20.04■□□□□ 0.8
SLC47A1-201ENST00000270570 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
SLC47A1-201ENST00000270570 GTF3C3Q9Y5Q9 886 aa19.94■□□□□ 0.78
SLC47A1-201ENST00000270570 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
SLC47A1-201ENST00000270570 SOGA1O94964 1423 aa19.92■□□□□ 0.78
SLC47A1-201ENST00000270570 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
SLC47A1-201ENST00000270570 CSRNP3Q8WYN3 585 aa19.86■□□□□ 0.77
SLC47A1-201ENST00000270570 CEP162Q5TB80 1403 aa19.83■□□□□ 0.76
SLC47A1-201ENST00000270570 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
SLC47A1-201ENST00000270570 NACADO15069 1562 aa19.81■□□□□ 0.76
SLC47A1-201ENST00000270570 CENPBP07199 599 aaPredicted RBP19.81■□□□□ 0.76
SLC47A1-201ENST00000270570 APLP2Q06481 763 aa19.78■□□□□ 0.76
SLC47A1-201ENST00000270570 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
SLC47A1-201ENST00000270570 ZNF316A6NFI3 1004 aaPredicted RBP19.66■□□□□ 0.74
SLC47A1-201ENST00000270570 ITGAEP38570 1179 aa19.66■□□□□ 0.74
SLC47A1-201ENST00000270570 MIER1Q8N108 512 aa19.63■□□□□ 0.73
SLC47A1-201ENST00000270570 TNIKQ9UKE5 1360 aa19.57■□□□□ 0.72
SLC47A1-201ENST00000270570 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
SLC47A1-201ENST00000270570 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
SLC47A1-201ENST00000270570 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
SLC47A1-201ENST00000270570 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
SLC47A1-201ENST00000270570 CLIP1P30622 1438 aa19.45■□□□□ 0.7
SLC47A1-201ENST00000270570 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
SLC47A1-201ENST00000270570 MYT1Q01538 1121 aa19.43■□□□□ 0.7
SLC47A1-201ENST00000270570 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
SLC47A1-201ENST00000270570 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.7
SLC47A1-201ENST00000270570 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
SLC47A1-201ENST00000270570 KANK4Q5T7N3 995 aaPredicted RBP19.31■□□□□ 0.68
SLC47A1-201ENST00000270570 RAPGEF2Q9Y4G8 1499 aa19.31■□□□□ 0.68
SLC47A1-201ENST00000270570 EEA1Q15075 1411 aa19.28■□□□□ 0.68
SLC47A1-201ENST00000270570 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
SLC47A1-201ENST00000270570 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
SLC47A1-201ENST00000270570 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
SLC47A1-201ENST00000270570 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
SLC47A1-201ENST00000270570 HIRIP3Q9BW71 556 aaPredicted RBP19.19■□□□□ 0.66
SLC47A1-201ENST00000270570 BAZ1BQ9UIG0 1483 aaKnown RBP19.19■□□□□ 0.66
SLC47A1-201ENST00000270570 BCANQ96GW7 911 aa19.18■□□□□ 0.66
SLC47A1-201ENST00000270570 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.65
SLC47A1-201ENST00000270570 KCNH8Q96L42 1107 aa19.12■□□□□ 0.65
SLC47A1-201ENST00000270570 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
SLC47A1-201ENST00000270570 BICRAQ9NZM4 1560 aa19.04■□□□□ 0.64
SLC47A1-201ENST00000270570 KIF21BO75037 1637 aa19.02■□□□□ 0.64
SLC47A1-201ENST00000270570 SIN3AQ96ST3 1273 aa19.02■□□□□ 0.64
SLC47A1-201ENST00000270570 DHX57Q6P158 1386 aaKnown RBP19.02■□□□□ 0.63
SLC47A1-201ENST00000270570 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
SLC47A1-201ENST00000270570 SUPT16HQ9Y5B9 1047 aaKnown RBP18.94■□□□□ 0.62
SLC47A1-201ENST00000270570 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
SLC47A1-201ENST00000270570 TRIM52Q96A61 297 aa18.9■□□□□ 0.62
SLC47A1-201ENST00000270570 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
SLC47A1-201ENST00000270570 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
SLC47A1-201ENST00000270570 CNGB1Q14028 1251 aaPredicted RBP18.85■□□□□ 0.61
SLC47A1-201ENST00000270570 KIF27Q86VH2 1401 aa18.84■□□□□ 0.61
SLC47A1-201ENST00000270570 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.6
SLC47A1-201ENST00000270570 FKBP8Q14318 412 aa18.82■□□□□ 0.6
SLC47A1-201ENST00000270570 CUX2O14529 1486 aa18.78■□□□□ 0.6
SLC47A1-201ENST00000270570 PRXQ9BXM0 1461 aa18.75■□□□□ 0.59
SLC47A1-201ENST00000270570 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
SLC47A1-201ENST00000270570 CUX1P39880 1505 aa18.73■□□□□ 0.59
SLC47A1-201ENST00000270570 ARHGAP35Q9NRY4 1499 aa18.72■□□□□ 0.59
SLC47A1-201ENST00000270570 PEG3Q9GZU2 1588 aa18.71■□□□□ 0.59
SLC47A1-201ENST00000270570 IRX6P78412 446 aaPredicted RBP18.71■□□□□ 0.59
SLC47A1-201ENST00000270570 CLSPNQ9HAW4 1339 aa18.7■□□□□ 0.58
SLC47A1-201ENST00000270570 BCL11AQ9H165 835 aa18.69■□□□□ 0.58
SLC47A1-201ENST00000270570 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms