RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 IGF1RP08069 1367 aa26.75■■□□□ 1.87
SOD1-201ENST00000270142 CUL7Q14999 1698 aa26.68■■□□□ 1.86
SOD1-201ENST00000270142 KIAA0586Q9BVV6 1533 aa26.65■■□□□ 1.86
SOD1-201ENST00000270142 CARMIL1Q5VZK9 1371 aa26.57■■□□□ 1.84
SOD1-201ENST00000270142 KIF13AQ9H1H9 1805 aa26.54■■□□□ 1.84
SOD1-201ENST00000270142 ADCY10Q96PN6 1610 aa26.52■■□□□ 1.84
SOD1-201ENST00000270142 NPM1P06748 294 aaKnown RBP eCLIP26.48■■□□□ 1.83
SOD1-201ENST00000270142 MAPKBP1O60336 1514 aa26.48■■□□□ 1.83
SOD1-201ENST00000270142 ABCC10Q5T3U5 1492 aa26.46■■□□□ 1.83
SOD1-201ENST00000270142 FAM69CQ0P6D2 419 aa26.43■■□□□ 1.82
SOD1-201ENST00000270142 IQGAP2Q13576 1575 aa26.4■■□□□ 1.82
SOD1-201ENST00000270142 DIP2BQ9P265 1576 aa26.4■■□□□ 1.82
SOD1-201ENST00000270142 PTPRGP23470 1445 aa26.39■■□□□ 1.82
SOD1-201ENST00000270142 CARMIL2Q6F5E8 1435 aa26.37■■□□□ 1.81
SOD1-201ENST00000270142 TNIKQ9UKE5 1360 aa26.36■■□□□ 1.81
SOD1-201ENST00000270142 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
SOD1-201ENST00000270142 TTBK1Q5TCY1 1321 aaPredicted RBP26.36■■□□□ 1.81
SOD1-201ENST00000270142 RAPGEF2Q9Y4G8 1499 aa26.33■■□□□ 1.81
SOD1-201ENST00000270142 DISP1Q96F81 1524 aa26.29■■□□□ 1.8
SOD1-201ENST00000270142 ABCC2Q92887 1545 aa26.27■■□□□ 1.8
SOD1-201ENST00000270142 UGGT2Q9NYU1 1516 aa26.24■■□□□ 1.79
SOD1-201ENST00000270142 UHRF1BP1LA0JNW5 1464 aa26.22■■□□□ 1.79
SOD1-201ENST00000270142 UACAQ9BZF9 1416 aa26.21■■□□□ 1.79
SOD1-201ENST00000270142 ASXL2Q76L83 1435 aa26.18■■□□□ 1.78
SOD1-201ENST00000270142 KIAA0556O60303 1618 aa26.17■■□□□ 1.78
SOD1-201ENST00000270142 TSPOAP1O95153 1857 aa26.17■■□□□ 1.78
SOD1-201ENST00000270142 KDM6BO15054 1643 aa26.15■■□□□ 1.78
SOD1-201ENST00000270142 PLB1Q6P1J6 1458 aa26.15■■□□□ 1.78
SOD1-201ENST00000270142 KDM5BQ9UGL1 1544 aa26.1■■□□□ 1.77
SOD1-201ENST00000270142 GLI2P10070 1586 aa26.1■■□□□ 1.77
SOD1-201ENST00000270142 CTTNBP2Q8WZ74 1663 aa26.09■■□□□ 1.77
SOD1-201ENST00000270142 PRXQ9BXM0 1461 aa26.08■■□□□ 1.77
SOD1-201ENST00000270142 ZCCHC11Q5TAX3 1644 aaKnown RBP26.05■■□□□ 1.76
SOD1-201ENST00000270142 PPRC1Q5VV67 1664 aaKnown RBP26.04■■□□□ 1.76
SOD1-201ENST00000270142 EPRSP07814 1512 aaKnown RBP26.03■■□□□ 1.76
SOD1-201ENST00000270142 GOLGA3Q08378 1498 aa26■■□□□ 1.75
SOD1-201ENST00000270142 MAP3K4Q9Y6R4 1608 aa25.96■■□□□ 1.75
SOD1-201ENST00000270142 ABCA8O94911 1581 aa25.93■■□□□ 1.74
SOD1-201ENST00000270142 WDR7Q9Y4E6 1490 aa25.92■■□□□ 1.74
SOD1-201ENST00000270142 KDM4FA0A1W2PPD8 638 aa25.9■■□□□ 1.74
SOD1-201ENST00000270142 COL17A1Q9UMD9 1497 aaPredicted RBP25.88■■□□□ 1.73
SOD1-201ENST00000270142 TEX14Q8IWB6 1497 aa25.87■■□□□ 1.73
SOD1-201ENST00000270142 CSRNP3Q8WYN3 585 aa25.85■■□□□ 1.73
SOD1-201ENST00000270142 P3H3Q8IVL6 736 aa25.8■■□□□ 1.72
SOD1-201ENST00000270142 KCNH8Q96L42 1107 aa25.77■■□□□ 1.72
SOD1-201ENST00000270142 CD109Q6YHK3 1445 aa25.76■■□□□ 1.71
SOD1-201ENST00000270142 SAMD9Q5K651 1589 aa25.75■■□□□ 1.71
SOD1-201ENST00000270142 CFAP43Q8NDM7 1665 aa25.74■■□□□ 1.71
SOD1-201ENST00000270142 MAGI3Q5TCQ9 1506 aa25.74■■□□□ 1.71
SOD1-201ENST00000270142 EEA1Q15075 1411 aa25.74■■□□□ 1.71
SOD1-201ENST00000270142 ARID3CA6NKF2 412 aa25.74■■□□□ 1.71
SOD1-201ENST00000270142 ATP10BO94823 1461 aa25.72■■□□□ 1.71
SOD1-201ENST00000270142 FAM9AQ8IZU1 332 aaPredicted RBP25.7■■□□□ 1.7
SOD1-201ENST00000270142 ADGRL1O94910 1474 aa25.7■■□□□ 1.7
SOD1-201ENST00000270142 RAPGEF6Q8TEU7 1601 aa25.65■■□□□ 1.7
SOD1-201ENST00000270142 RANGAP1P46060 587 aaPredicted RBP25.62■■□□□ 1.69
SOD1-201ENST00000270142 FHOD3Q2V2M9 1422 aa25.61■■□□□ 1.69
SOD1-201ENST00000270142 NUP153P49790 1475 aaKnown RBP25.57■■□□□ 1.68
SOD1-201ENST00000270142 ABCA9Q8IUA7 1624 aa25.56■■□□□ 1.68
SOD1-201ENST00000270142 KIF21BO75037 1637 aa25.55■■□□□ 1.68
SOD1-201ENST00000270142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.54■■□□□ 1.68
SOD1-201ENST00000270142 HNRNPUL2Q1KMD3 747 aaKnown RBP25.54■■□□□ 1.68
SOD1-201ENST00000270142 ARAP3Q8WWN8 1544 aa25.53■■□□□ 1.68
SOD1-201ENST00000270142 EFCAB5A4FU69 1503 aa25.48■■□□□ 1.67
SOD1-201ENST00000270142 PHLDB1Q86UU1 1377 aa25.45■■□□□ 1.67
SOD1-201ENST00000270142 NEO1Q92859 1461 aa25.43■■□□□ 1.66
SOD1-201ENST00000270142 PLEKHD1A6NEE1 506 aa25.39■■□□□ 1.66
SOD1-201ENST00000270142 RAPGEF3O95398 923 aa25.39■■□□□ 1.66
SOD1-201ENST00000270142 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
SOD1-201ENST00000270142 EHMT2Q96KQ7 1210 aa25.39■■□□□ 1.66
SOD1-201ENST00000270142 FRMPD1Q5SYB0 1578 aa25.36■■□□□ 1.65
SOD1-201ENST00000270142 HECW2Q9P2P5 1572 aa25.35■■□□□ 1.65
SOD1-201ENST00000270142 UBTFP17480 764 aaKnown RBP25.34■■□□□ 1.65
SOD1-201ENST00000270142 CDK13Q14004 1512 aaKnown RBP25.33■■□□□ 1.65
SOD1-201ENST00000270142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.33■■□□□ 1.654e-8■■■□□ 14.7
SOD1-201ENST00000270142 TTC37Q6PGP7 1564 aa25.3■■□□□ 1.64
SOD1-201ENST00000270142 ARHGAP35Q9NRY4 1499 aa25.29■■□□□ 1.64
SOD1-201ENST00000270142 AKNAQ7Z591 1439 aa25.28■■□□□ 1.64
SOD1-201ENST00000270142 FANCAO15360 1455 aa25.28■■□□□ 1.64
SOD1-201ENST00000270142 FMN1Q68DA7 1419 aa25.26■■□□□ 1.63
SOD1-201ENST00000270142 DENND4BO75064 1496 aaPredicted RBP25.26■■□□□ 1.63
SOD1-201ENST00000270142 CFAP74Q9C0B2 1584 aa25.25■■□□□ 1.63
SOD1-201ENST00000270142 ADAMTSL3P82987 1691 aa25.23■■□□□ 1.63
SOD1-201ENST00000270142 RICTORQ6R327 1708 aa25.23■■□□□ 1.63
SOD1-201ENST00000270142 HECW1Q76N89 1606 aa25.23■■□□□ 1.63
SOD1-201ENST00000270142 ARHGEF40Q8TER5 1519 aa25.22■■□□□ 1.63
SOD1-201ENST00000270142 ATP1B4Q9UN42 357 aaPredicted RBP25.21■■□□□ 1.63
SOD1-201ENST00000270142 BCORL1Q5H9F3 1711 aa25.18■■□□□ 1.62
SOD1-201ENST00000270142 PTPRMP28827 1452 aa25.18■■□□□ 1.62
SOD1-201ENST00000270142 ARID4BQ4LE39 1312 aaPredicted RBP25.17■■□□□ 1.62
SOD1-201ENST00000270142 PLCH2O75038 1416 aa25.16■■□□□ 1.62
SOD1-201ENST00000270142 ZMYM4Q5VZL5 1548 aa25.15■■□□□ 1.62
SOD1-201ENST00000270142 MADDQ8WXG6 1647 aa25.13■■□□□ 1.61
SOD1-201ENST00000270142 YEATS2Q9ULM3 1422 aa25.11■■□□□ 1.61
SOD1-201ENST00000270142 CDK11AQ9UQ88 783 aaPredicted RBP25.1■■□□□ 1.61
SOD1-201ENST00000270142 KIF14Q15058 1648 aa25.1■■□□□ 1.61
SOD1-201ENST00000270142 ZFYVE16Q7Z3T8 1539 aa25.1■■□□□ 1.61
SOD1-201ENST00000270142 SCAPERQ9BY12 1400 aa25.1■■□□□ 1.61
SOD1-201ENST00000270142 ILDR1Q86SU0 546 aaPredicted RBP25.09■■□□□ 1.61
SOD1-201ENST00000270142 POGZQ7Z3K3 1410 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms