RNA–Protein interactions for RNA: ENST00000269967.3

CCDC97-201, Transcript of coiled-coil domain containing 97, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC97, Length 3,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97-201ENST00000269967 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
CCDC97-201ENST00000269967 CHIC2Q9UKJ5 165 aa19.23■□□□□ 0.67
CCDC97-201ENST00000269967 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
CCDC97-201ENST00000269967 FBLN2P98095 1184 aa19.2■□□□□ 0.66
CCDC97-201ENST00000269967 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
CCDC97-201ENST00000269967 RAB3GAP2Q9H2M9 1393 aa19.18■□□□□ 0.66
CCDC97-201ENST00000269967 DDX10Q13206 875 aaKnown RBP19.17■□□□□ 0.66
CCDC97-201ENST00000269967 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
CCDC97-201ENST00000269967 PHLDB1Q86UU1 1377 aa19.14■□□□□ 0.65
CCDC97-201ENST00000269967 TRIM52Q96A61 297 aa19.13■□□□□ 0.65
CCDC97-201ENST00000269967 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
CCDC97-201ENST00000269967 CNGB1Q14028 1251 aaPredicted RBP19.1■□□□□ 0.65
CCDC97-201ENST00000269967 KCNH8Q96L42 1107 aa19.08■□□□□ 0.65
CCDC97-201ENST00000269967 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
CCDC97-201ENST00000269967 FHAD1B1AJZ9 1412 aa19.04■□□□□ 0.64
CCDC97-201ENST00000269967 RRBP1Q9P2E9 1410 aaKnown RBP19.02■□□□□ 0.64
CCDC97-201ENST00000269967 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
CCDC97-201ENST00000269967 SETD5Q9C0A6 1442 aa19.01■□□□□ 0.63
CCDC97-201ENST00000269967 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
CCDC97-201ENST00000269967 LRRC9Q6ZRR7 1453 aa18.99■□□□□ 0.63
CCDC97-201ENST00000269967 BCANQ96GW7 911 aa18.99■□□□□ 0.63
CCDC97-201ENST00000269967 ZNF777Q9ULD5 760 aaPredicted RBP18.97■□□□□ 0.63
CCDC97-201ENST00000269967 FOXD1Q16676 465 aa18.94■□□□□ 0.62
CCDC97-201ENST00000269967 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
CCDC97-201ENST00000269967 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.622e-6■■■■■ 28.1
CCDC97-201ENST00000269967 TONSLQ96HA7 1378 aa18.92■□□□□ 0.62
CCDC97-201ENST00000269967 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
CCDC97-201ENST00000269967 TIAM1Q13009 1591 aa18.9■□□□□ 0.62
CCDC97-201ENST00000269967 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
CCDC97-201ENST00000269967 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.61
CCDC97-201ENST00000269967 ZNF326Q5BKZ1 582 aaKnown RBP18.87■□□□□ 0.61
CCDC97-201ENST00000269967 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
CCDC97-201ENST00000269967 DNMBPQ6XZF7 1577 aa18.86■□□□□ 0.61
CCDC97-201ENST00000269967 ABCA10Q8WWZ4 1543 aa18.85■□□□□ 0.61
CCDC97-201ENST00000269967 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
CCDC97-201ENST00000269967 MYT1Q01538 1121 aa18.84■□□□□ 0.61
CCDC97-201ENST00000269967 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
CCDC97-201ENST00000269967 ANP32CO43423 234 aa18.81■□□□□ 0.6
CCDC97-201ENST00000269967 PPP1R15AO75807 674 aaPredicted RBP18.8■□□□□ 0.6
CCDC97-201ENST00000269967 CASKIN1Q8WXD9 1431 aa18.78■□□□□ 0.6
CCDC97-201ENST00000269967 ZNF644Q9H582 1327 aaPredicted RBP18.77■□□□□ 0.59
CCDC97-201ENST00000269967 FGD6Q6ZV73 1430 aa18.76■□□□□ 0.59
CCDC97-201ENST00000269967 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
CCDC97-201ENST00000269967 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
CCDC97-201ENST00000269967 MAPKBP1O60336 1514 aa18.71■□□□□ 0.59
CCDC97-201ENST00000269967 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
CCDC97-201ENST00000269967 PTPRKQ15262 1439 aa18.7■□□□□ 0.58
CCDC97-201ENST00000269967 FKBP8Q14318 412 aa18.7■□□□□ 0.58
CCDC97-201ENST00000269967 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
CCDC97-201ENST00000269967 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
CCDC97-201ENST00000269967 SUPT16HQ9Y5B9 1047 aaKnown RBP18.69■□□□□ 0.58
CCDC97-201ENST00000269967 ERCC6Q03468 1493 aa18.68■□□□□ 0.58
CCDC97-201ENST00000269967 CCDC18Q5T9S5 1454 aa18.68■□□□□ 0.58
CCDC97-201ENST00000269967 CDK11AQ9UQ88 783 aaPredicted RBP18.67■□□□□ 0.58
CCDC97-201ENST00000269967 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
CCDC97-201ENST00000269967 NEFLP07196 543 aa18.65■□□□□ 0.58
CCDC97-201ENST00000269967 CFDP1Q9UEE9 299 aaPredicted RBP18.65■□□□□ 0.58
CCDC97-201ENST00000269967 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.58
CCDC97-201ENST00000269967 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.58
CCDC97-201ENST00000269967 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
CCDC97-201ENST00000269967 MYOM3Q5VTT5 1437 aa18.63■□□□□ 0.57
CCDC97-201ENST00000269967 IRX6P78412 446 aaPredicted RBP18.63■□□□□ 0.57
CCDC97-201ENST00000269967 HNRNPUQ00839 825 aaKnown RBP eCLIP18.62■□□□□ 0.57
CCDC97-201ENST00000269967 CDK13Q14004 1512 aaKnown RBP18.61■□□□□ 0.57
CCDC97-201ENST00000269967 L3MBTL2Q969R5 705 aa18.61■□□□□ 0.57
CCDC97-201ENST00000269967 EFCAB5A4FU69 1503 aa18.6■□□□□ 0.57
CCDC97-201ENST00000269967 HSPA5P11021 654 aaKnown RBP18.6■□□□□ 0.57
CCDC97-201ENST00000269967 MAP3K1Q13233 1512 aa18.59■□□□□ 0.57
CCDC97-201ENST00000269967 FAM9BQ8IZU0 186 aa18.59■□□□□ 0.57
CCDC97-201ENST00000269967 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
CCDC97-201ENST00000269967 CUL7Q14999 1698 aa18.56■□□□□ 0.56
CCDC97-201ENST00000269967 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
CCDC97-201ENST00000269967 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC97-201ENST00000269967 SNAPC4Q5SXM2 1469 aa18.56■□□□□ 0.56
CCDC97-201ENST00000269967 NAIPQ13075 1403 aa18.56■□□□□ 0.56
CCDC97-201ENST00000269967 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
CCDC97-201ENST00000269967 JPH4Q96JJ6 628 aa18.55■□□□□ 0.56
CCDC97-201ENST00000269967 UACAQ9BZF9 1416 aa18.52■□□□□ 0.56
CCDC97-201ENST00000269967 PLEKHD1A6NEE1 506 aa18.52■□□□□ 0.55
CCDC97-201ENST00000269967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.55
CCDC97-201ENST00000269967 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
CCDC97-201ENST00000269967 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
CCDC97-201ENST00000269967 CTTNBP2Q8WZ74 1663 aa18.49■□□□□ 0.55
CCDC97-201ENST00000269967 MRC2Q9UBG0 1479 aa18.48■□□□□ 0.55
CCDC97-201ENST00000269967 EPRSP07814 1512 aaKnown RBP18.48■□□□□ 0.55
CCDC97-201ENST00000269967 CFAP43Q8NDM7 1665 aa18.47■□□□□ 0.55
CCDC97-201ENST00000269967 PRG4Q92954 1404 aaPredicted RBP18.46■□□□□ 0.55
CCDC97-201ENST00000269967 MYT1LQ9UL68 1186 aa18.46■□□□□ 0.55
CCDC97-201ENST00000269967 MAGI3Q5TCQ9 1506 aa18.45■□□□□ 0.54
CCDC97-201ENST00000269967 HNRNPMP52272 730 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC97-201ENST00000269967 PKD2Q13563 968 aa18.45■□□□□ 0.54
CCDC97-201ENST00000269967 RGL3Q3MIN7 710 aa18.45■□□□□ 0.54
CCDC97-201ENST00000269967 TSPY4P0CV99 314 aa18.44■□□□□ 0.54
CCDC97-201ENST00000269967 TSPY10P0CW01 314 aa18.44■□□□□ 0.54
CCDC97-201ENST00000269967 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
CCDC97-201ENST00000269967 ABCA5Q8WWZ7 1642 aa18.43■□□□□ 0.54
CCDC97-201ENST00000269967 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
CCDC97-201ENST00000269967 IQGAP2Q13576 1575 aa18.43■□□□□ 0.54
CCDC97-201ENST00000269967 NBPF8Q3BBV2 869 aa18.43■□□□□ 0.54
CCDC97-201ENST00000269967 CCDC184Q52MB2 194 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms