RNA–Protein interactions for RNA: ENST00000269967.3

CCDC97-201, Transcript of coiled-coil domain containing 97, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC97, Length 3,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97-201ENST00000269967 NISCHQ9Y2I1 1504 aa26.82■■□□□ 1.88
CCDC97-201ENST00000269967 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
CCDC97-201ENST00000269967 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.41
CCDC97-201ENST00000269967 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
CCDC97-201ENST00000269967 ZCCHC6Q5VYS8 1495 aaKnown RBP22.53■■□□□ 1.2
CCDC97-201ENST00000269967 CCDC180Q9P1Z9 1646 aa22.34■■□□□ 1.17
CCDC97-201ENST00000269967 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
CCDC97-201ENST00000269967 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
CCDC97-201ENST00000269967 LOC105371045A0A1W2PR82 267 aa21.99■■□□□ 1.11
CCDC97-201ENST00000269967 PCGF6Q9BYE7 350 aa21.92■■□□□ 1.1
CCDC97-201ENST00000269967 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
CCDC97-201ENST00000269967 ABCC9O60706 1549 aa21.91■■□□□ 1.1
CCDC97-201ENST00000269967 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.1
CCDC97-201ENST00000269967 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
CCDC97-201ENST00000269967 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
CCDC97-201ENST00000269967 DCAF1Q9Y4B6 1507 aa21.52■■□□□ 1.04
CCDC97-201ENST00000269967 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
CCDC97-201ENST00000269967 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.01
CCDC97-201ENST00000269967 HRCP23327 699 aa21.35■■□□□ 1.01
CCDC97-201ENST00000269967 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
CCDC97-201ENST00000269967 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
CCDC97-201ENST00000269967 CECR2Q9BXF3 1484 aa21.27■■□□□ 1
CCDC97-201ENST00000269967 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
CCDC97-201ENST00000269967 TRIM26Q12899 539 aaPredicted RBP21.1■□□□□ 0.97
CCDC97-201ENST00000269967 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
CCDC97-201ENST00000269967 NACADO15069 1562 aa20.98■□□□□ 0.95
CCDC97-201ENST00000269967 RANGAP1P46060 587 aaPredicted RBP20.94■□□□□ 0.94
CCDC97-201ENST00000269967 WIZO95785 1651 aa20.86■□□□□ 0.93
CCDC97-201ENST00000269967 UBTFP17480 764 aaKnown RBP20.84■□□□□ 0.93
CCDC97-201ENST00000269967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
CCDC97-201ENST00000269967 CCER1Q8TC90 406 aaPredicted RBP20.62■□□□□ 0.89
CCDC97-201ENST00000269967 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
CCDC97-201ENST00000269967 BAZ1AQ9NRL2 1556 aaPredicted RBP20.6■□□□□ 0.89
CCDC97-201ENST00000269967 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
CCDC97-201ENST00000269967 CSRNP3Q8WYN3 585 aa20.48■□□□□ 0.87
CCDC97-201ENST00000269967 SOGA1O94964 1423 aa20.48■□□□□ 0.87
CCDC97-201ENST00000269967 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
CCDC97-201ENST00000269967 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
CCDC97-201ENST00000269967 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
CCDC97-201ENST00000269967 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
CCDC97-201ENST00000269967 APLP2Q06481 763 aa20.35■□□□□ 0.85
CCDC97-201ENST00000269967 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
CCDC97-201ENST00000269967 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
CCDC97-201ENST00000269967 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
CCDC97-201ENST00000269967 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
CCDC97-201ENST00000269967 UNC13AQ9UPW8 1703 aa20.2■□□□□ 0.82
CCDC97-201ENST00000269967 BAZ1BQ9UIG0 1483 aaKnown RBP20.16■□□□□ 0.82
CCDC97-201ENST00000269967 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
CCDC97-201ENST00000269967 ITGAEP38570 1179 aa20.1■□□□□ 0.81
CCDC97-201ENST00000269967 ATP1B4Q9UN42 357 aaPredicted RBP20.1■□□□□ 0.81
CCDC97-201ENST00000269967 ATAD2BQ9ULI0 1458 aa20.08■□□□□ 0.8
CCDC97-201ENST00000269967 TNIKQ9UKE5 1360 aa20.07■□□□□ 0.8
CCDC97-201ENST00000269967 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
CCDC97-201ENST00000269967 YTHDC1Q96MU7 727 aaKnown RBP19.98■□□□□ 0.79
CCDC97-201ENST00000269967 DIEXFQ68CQ4 756 aaKnown RBP19.97■□□□□ 0.79
CCDC97-201ENST00000269967 CLIP1P30622 1438 aa19.97■□□□□ 0.79
CCDC97-201ENST00000269967 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
CCDC97-201ENST00000269967 P3H3Q8IVL6 736 aa19.92■□□□□ 0.78
CCDC97-201ENST00000269967 EEA1Q15075 1411 aa19.92■□□□□ 0.78
CCDC97-201ENST00000269967 SYNJ1O43426 1573 aa19.89■□□□□ 0.77
CCDC97-201ENST00000269967 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
CCDC97-201ENST00000269967 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
CCDC97-201ENST00000269967 KANK4Q5T7N3 995 aaPredicted RBP19.77■□□□□ 0.76
CCDC97-201ENST00000269967 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
CCDC97-201ENST00000269967 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
CCDC97-201ENST00000269967 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
CCDC97-201ENST00000269967 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
CCDC97-201ENST00000269967 FAM50AQ14320 339 aaKnown RBP19.65■□□□□ 0.74
CCDC97-201ENST00000269967 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
CCDC97-201ENST00000269967 CENPBP07199 599 aaPredicted RBP19.62■□□□□ 0.73
CCDC97-201ENST00000269967 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
CCDC97-201ENST00000269967 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
CCDC97-201ENST00000269967 CUX2O14529 1486 aa19.57■□□□□ 0.72
CCDC97-201ENST00000269967 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
CCDC97-201ENST00000269967 ARID3CA6NKF2 412 aa19.55■□□□□ 0.72
CCDC97-201ENST00000269967 MIER1Q8N108 512 aa19.55■□□□□ 0.72
CCDC97-201ENST00000269967 ACIN1Q9UKV3 1341 aaKnown RBP19.55■□□□□ 0.72
CCDC97-201ENST00000269967 KIF21BO75037 1637 aa19.51■□□□□ 0.71
CCDC97-201ENST00000269967 CUX1P39880 1505 aa19.51■□□□□ 0.71
CCDC97-201ENST00000269967 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
CCDC97-201ENST00000269967 TOP2BQ02880 1626 aa19.47■□□□□ 0.71
CCDC97-201ENST00000269967 CADPSQ9ULU8 1353 aa19.47■□□□□ 0.71
CCDC97-201ENST00000269967 PELP1Q8IZL8 1130 aaKnown RBP19.46■□□□□ 0.71
CCDC97-201ENST00000269967 CARMIL1Q5VZK9 1371 aa19.45■□□□□ 0.7
CCDC97-201ENST00000269967 ARAP1Q96P48 1450 aa19.43■□□□□ 0.7
CCDC97-201ENST00000269967 CFTRP13569 1480 aa19.43■□□□□ 0.7
CCDC97-201ENST00000269967 IGF1RP08069 1367 aa19.41■□□□□ 0.7
CCDC97-201ENST00000269967 PRXQ9BXM0 1461 aa19.4■□□□□ 0.7
CCDC97-201ENST00000269967 HIRIP3Q9BW71 556 aaPredicted RBP19.38■□□□□ 0.69
CCDC97-201ENST00000269967 NESP48681 1621 aa19.35■□□□□ 0.69
CCDC97-201ENST00000269967 RAD54L2Q9Y4B4 1467 aa19.34■□□□□ 0.69
CCDC97-201ENST00000269967 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
CCDC97-201ENST00000269967 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
CCDC97-201ENST00000269967 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
CCDC97-201ENST00000269967 SIN3AQ96ST3 1273 aa19.32■□□□□ 0.68
CCDC97-201ENST00000269967 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
CCDC97-201ENST00000269967 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
CCDC97-201ENST00000269967 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
CCDC97-201ENST00000269967 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
CCDC97-201ENST00000269967 DHX57Q6P158 1386 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms