RNA–Protein interactions for RNA: ENST00000269280.8

NLRP1-202, Transcript of NLR family pyrin domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NLRP1, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP1-202ENST00000269280 KCNH8Q96L42 1107 aa17.07■□□□□ 0.32
NLRP1-202ENST00000269280 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
NLRP1-202ENST00000269280 CARMIL2Q6F5E8 1435 aa17.07■□□□□ 0.32
NLRP1-202ENST00000269280 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
NLRP1-202ENST00000269280 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
NLRP1-202ENST00000269280 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
NLRP1-202ENST00000269280 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
NLRP1-202ENST00000269280 CCNB3Q8WWL7 1395 aa17.03■□□□□ 0.32
NLRP1-202ENST00000269280 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
NLRP1-202ENST00000269280 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
NLRP1-202ENST00000269280 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
NLRP1-202ENST00000269280 EIF4G2P78344 907 aaKnown RBP eCLIP16.97■□□□□ 0.31
NLRP1-202ENST00000269280 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
NLRP1-202ENST00000269280 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
NLRP1-202ENST00000269280 ARHGAP35Q9NRY4 1499 aa16.92■□□□□ 0.3
NLRP1-202ENST00000269280 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
NLRP1-202ENST00000269280 KDM2AQ9Y2K7 1162 aa16.91■□□□□ 0.3
NLRP1-202ENST00000269280 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
NLRP1-202ENST00000269280 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
NLRP1-202ENST00000269280 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
NLRP1-202ENST00000269280 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
NLRP1-202ENST00000269280 SETD5Q9C0A6 1442 aa16.81■□□□□ 0.28
NLRP1-202ENST00000269280 SLC24A1O60721 1099 aa16.8■□□□□ 0.28
NLRP1-202ENST00000269280 KANK1Q14678 1352 aa16.8■□□□□ 0.28
NLRP1-202ENST00000269280 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
NLRP1-202ENST00000269280 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
NLRP1-202ENST00000269280 HMGXB3Q12766 1538 aa16.78■□□□□ 0.28
NLRP1-202ENST00000269280 WDR43Q15061 677 aaKnown RBP eCLIP16.77■□□□□ 0.27
NLRP1-202ENST00000269280 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
NLRP1-202ENST00000269280 RSPH4AQ5TD94 716 aa16.76■□□□□ 0.27
NLRP1-202ENST00000269280 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
NLRP1-202ENST00000269280 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
NLRP1-202ENST00000269280 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
NLRP1-202ENST00000269280 EFCAB2Q5VUJ9 269 aa16.75■□□□□ 0.27
NLRP1-202ENST00000269280 CCDC18Q5T9S5 1454 aa16.75■□□□□ 0.27
NLRP1-202ENST00000269280 RGL3Q3MIN7 710 aa16.74■□□□□ 0.27
NLRP1-202ENST00000269280 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
NLRP1-202ENST00000269280 CFTRP13569 1480 aa16.73■□□□□ 0.27
NLRP1-202ENST00000269280 PLPPR3Q6T4P5 718 aa16.72■□□□□ 0.27
NLRP1-202ENST00000269280 FHOD3Q2V2M9 1422 aa16.72■□□□□ 0.27
NLRP1-202ENST00000269280 RTL5Q5HYW3 569 aaPredicted RBP16.72■□□□□ 0.27
NLRP1-202ENST00000269280 GAPVD1Q14C86 1478 aa16.72■□□□□ 0.27
NLRP1-202ENST00000269280 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
NLRP1-202ENST00000269280 IGF1RP08069 1367 aa16.71■□□□□ 0.27
NLRP1-202ENST00000269280 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.71■□□□□ 0.27
NLRP1-202ENST00000269280 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.26
NLRP1-202ENST00000269280 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
NLRP1-202ENST00000269280 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
NLRP1-202ENST00000269280 SIN3AQ96ST3 1273 aa16.65■□□□□ 0.26
NLRP1-202ENST00000269280 MIER1Q8N108 512 aa16.65■□□□□ 0.26
NLRP1-202ENST00000269280 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
NLRP1-202ENST00000269280 KNSTRNQ9Y448 316 aa16.63■□□□□ 0.25
NLRP1-202ENST00000269280 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
NLRP1-202ENST00000269280 CFAP53Q96M91 514 aa16.61■□□□□ 0.25
NLRP1-202ENST00000269280 RAB3GAP2Q9H2M9 1393 aa16.61■□□□□ 0.25
NLRP1-202ENST00000269280 FKBP8Q14318 412 aa16.6■□□□□ 0.25
NLRP1-202ENST00000269280 PTPRGP23470 1445 aa16.6■□□□□ 0.25
NLRP1-202ENST00000269280 RAD54L2Q9Y4B4 1467 aa16.59■□□□□ 0.25
NLRP1-202ENST00000269280 CC2D2AQ9P2K1 1620 aa16.59■□□□□ 0.25
NLRP1-202ENST00000269280 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.24
NLRP1-202ENST00000269280 PKD2Q13563 968 aa16.58■□□□□ 0.24
NLRP1-202ENST00000269280 DCAF11Q8TEB1 546 aa16.56■□□□□ 0.24
NLRP1-202ENST00000269280 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
NLRP1-202ENST00000269280 MPHOSPH9Q99550 1183 aa16.56■□□□□ 0.24
NLRP1-202ENST00000269280 TMF1P82094 1093 aa16.55■□□□□ 0.24
NLRP1-202ENST00000269280 KIF21BO75037 1637 aa16.55■□□□□ 0.24
NLRP1-202ENST00000269280 NUP155O75694 1391 aa16.55■□□□□ 0.24
NLRP1-202ENST00000269280 ANP32AP39687 249 aaKnown RBP16.55■□□□□ 0.24
NLRP1-202ENST00000269280 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
NLRP1-202ENST00000269280 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
NLRP1-202ENST00000269280 POGKQ9P215 609 aa16.54■□□□□ 0.24
NLRP1-202ENST00000269280 SALL2Q9Y467 1007 aaPredicted RBP16.51■□□□□ 0.23
NLRP1-202ENST00000269280 SPAG9O60271 1321 aaKnown RBP16.51■□□□□ 0.23
NLRP1-202ENST00000269280 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
NLRP1-202ENST00000269280 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
NLRP1-202ENST00000269280 C14orf37Q86TY3 774 aa16.5■□□□□ 0.23
NLRP1-202ENST00000269280 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
NLRP1-202ENST00000269280 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
NLRP1-202ENST00000269280 GGT6Q6P531 493 aa16.48■□□□□ 0.23
NLRP1-202ENST00000269280 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
NLRP1-202ENST00000269280 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
NLRP1-202ENST00000269280 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
NLRP1-202ENST00000269280 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
NLRP1-202ENST00000269280 CUX1P39880 1505 aa16.46■□□□□ 0.23
NLRP1-202ENST00000269280 TOPBP1Q92547 1522 aa16.46■□□□□ 0.23
NLRP1-202ENST00000269280 AQRO60306 1485 aaKnown RBP eCLIP16.46■□□□□ 0.238e-7■■■■□ 25.4
NLRP1-202ENST00000269280 HNRNPMP52272 730 aaKnown RBP eCLIP16.46■□□□□ 0.223e-6■■■■■ 42.4
NLRP1-202ENST00000269280 PEG3Q9GZU2 1588 aa16.44■□□□□ 0.22
NLRP1-202ENST00000269280 CASKIN1Q8WXD9 1431 aa16.44■□□□□ 0.22
NLRP1-202ENST00000269280 CCER2I3L3R5 266 aa16.43■□□□□ 0.22
NLRP1-202ENST00000269280 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
NLRP1-202ENST00000269280 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
NLRP1-202ENST00000269280 KIF3BO15066 747 aa16.42■□□□□ 0.22
NLRP1-202ENST00000269280 EFCAB5A4FU69 1503 aa16.42■□□□□ 0.22
NLRP1-202ENST00000269280 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
NLRP1-202ENST00000269280 MYOM3Q5VTT5 1437 aa16.41■□□□□ 0.22
NLRP1-202ENST00000269280 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
NLRP1-202ENST00000269280 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
NLRP1-202ENST00000269280 NESP48681 1621 aa16.4■□□□□ 0.22
NLRP1-202ENST00000269280 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms