RNA–Protein interactions for RNA: ENST00000269280.8

NLRP1-202, Transcript of NLR family pyrin domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NLRP1, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP1-202ENST00000269280 NISCHQ9Y2I1 1504 aa22.86■■□□□ 1.25
NLRP1-202ENST00000269280 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
NLRP1-202ENST00000269280 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
NLRP1-202ENST00000269280 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
NLRP1-202ENST00000269280 APLP2Q06481 763 aa19.66■□□□□ 0.74
NLRP1-202ENST00000269280 FAM9AQ8IZU1 332 aaPredicted RBP19.58■□□□□ 0.73
NLRP1-202ENST00000269280 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.72
NLRP1-202ENST00000269280 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
NLRP1-202ENST00000269280 ABCC9O60706 1549 aa19.35■□□□□ 0.69
NLRP1-202ENST00000269280 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
NLRP1-202ENST00000269280 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
NLRP1-202ENST00000269280 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
NLRP1-202ENST00000269280 ZEB1P37275 1124 aaPredicted RBP19■□□□□ 0.63
NLRP1-202ENST00000269280 ZCCHC6Q5VYS8 1495 aaKnown RBP18.99■□□□□ 0.63
NLRP1-202ENST00000269280 RANGAP1P46060 587 aaPredicted RBP18.97■□□□□ 0.63
NLRP1-202ENST00000269280 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
NLRP1-202ENST00000269280 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
NLRP1-202ENST00000269280 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
NLRP1-202ENST00000269280 ATP1B4Q9UN42 357 aaPredicted RBP18.89■□□□□ 0.61
NLRP1-202ENST00000269280 CCER1Q8TC90 406 aaPredicted RBP18.76■□□□□ 0.59
NLRP1-202ENST00000269280 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
NLRP1-202ENST00000269280 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
NLRP1-202ENST00000269280 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
NLRP1-202ENST00000269280 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
NLRP1-202ENST00000269280 LOC105371045A0A1W2PR82 267 aa18.54■□□□□ 0.56
NLRP1-202ENST00000269280 NACADO15069 1562 aa18.5■□□□□ 0.55
NLRP1-202ENST00000269280 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
NLRP1-202ENST00000269280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.42■□□□□ 0.54
NLRP1-202ENST00000269280 HNRNPUL2Q1KMD3 747 aaKnown RBP18.42■□□□□ 0.54
NLRP1-202ENST00000269280 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
NLRP1-202ENST00000269280 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.53
NLRP1-202ENST00000269280 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
NLRP1-202ENST00000269280 ITGAEP38570 1179 aa18.22■□□□□ 0.51
NLRP1-202ENST00000269280 HRCP23327 699 aa18.19■□□□□ 0.5
NLRP1-202ENST00000269280 MYT1LQ9UL68 1186 aa18.17■□□□□ 0.5
NLRP1-202ENST00000269280 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
NLRP1-202ENST00000269280 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
NLRP1-202ENST00000269280 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
NLRP1-202ENST00000269280 FBLN2P98095 1184 aa17.99■□□□□ 0.47
NLRP1-202ENST00000269280 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
NLRP1-202ENST00000269280 NEFLP07196 543 aa17.97■□□□□ 0.47
NLRP1-202ENST00000269280 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
NLRP1-202ENST00000269280 EEA1Q15075 1411 aa17.91■□□□□ 0.46
NLRP1-202ENST00000269280 CDK11AQ9UQ88 783 aaPredicted RBP17.9■□□□□ 0.46
NLRP1-202ENST00000269280 TRIM52Q96A61 297 aa17.84■□□□□ 0.45
NLRP1-202ENST00000269280 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
NLRP1-202ENST00000269280 P3H3Q8IVL6 736 aa17.78■□□□□ 0.44
NLRP1-202ENST00000269280 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.439e-6■■■■■ 50.1
NLRP1-202ENST00000269280 POLR3GLQ9BT43 218 aa17.74■□□□□ 0.43
NLRP1-202ENST00000269280 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
NLRP1-202ENST00000269280 GOLGA3Q08378 1498 aa17.66■□□□□ 0.42
NLRP1-202ENST00000269280 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
NLRP1-202ENST00000269280 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.42
NLRP1-202ENST00000269280 KIF27Q86VH2 1401 aa17.64■□□□□ 0.41
NLRP1-202ENST00000269280 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
NLRP1-202ENST00000269280 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
NLRP1-202ENST00000269280 CLIP1P30622 1438 aa17.62■□□□□ 0.41
NLRP1-202ENST00000269280 CHMP7Q8WUX9 453 aaPredicted RBP17.6■□□□□ 0.41
NLRP1-202ENST00000269280 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
NLRP1-202ENST00000269280 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
NLRP1-202ENST00000269280 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
NLRP1-202ENST00000269280 ARID3CA6NKF2 412 aa17.55■□□□□ 0.4
NLRP1-202ENST00000269280 ZNF777Q9ULD5 760 aaPredicted RBP17.53■□□□□ 0.4
NLRP1-202ENST00000269280 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
NLRP1-202ENST00000269280 MTUS2Q5JR59 1369 aa17.5■□□□□ 0.39
NLRP1-202ENST00000269280 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
NLRP1-202ENST00000269280 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
NLRP1-202ENST00000269280 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
NLRP1-202ENST00000269280 SLC4A1APQ9BWU0 796 aaKnown RBP17.47■□□□□ 0.39
NLRP1-202ENST00000269280 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
NLRP1-202ENST00000269280 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
NLRP1-202ENST00000269280 ANP32CO43423 234 aa17.44■□□□□ 0.38
NLRP1-202ENST00000269280 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
NLRP1-202ENST00000269280 ZNF326Q5BKZ1 582 aaKnown RBP17.43■□□□□ 0.38
NLRP1-202ENST00000269280 PDS5BQ9NTI5 1447 aa17.39■□□□□ 0.37
NLRP1-202ENST00000269280 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
NLRP1-202ENST00000269280 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
NLRP1-202ENST00000269280 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
NLRP1-202ENST00000269280 CNGB1Q14028 1251 aaPredicted RBP17.37■□□□□ 0.37
NLRP1-202ENST00000269280 MYT1Q01538 1121 aa17.36■□□□□ 0.37
NLRP1-202ENST00000269280 PLEKHD1A6NEE1 506 aa17.32■□□□□ 0.36
NLRP1-202ENST00000269280 ESF1Q9H501 851 aaKnown RBP17.32■□□□□ 0.36
NLRP1-202ENST00000269280 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
NLRP1-202ENST00000269280 CUX2O14529 1486 aa17.31■□□□□ 0.36
NLRP1-202ENST00000269280 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
NLRP1-202ENST00000269280 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
NLRP1-202ENST00000269280 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
NLRP1-202ENST00000269280 WIZO95785 1651 aa17.28■□□□□ 0.36
NLRP1-202ENST00000269280 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
NLRP1-202ENST00000269280 CHIC2Q9UKJ5 165 aa17.23■□□□□ 0.35
NLRP1-202ENST00000269280 SOGA1O94964 1423 aa17.22■□□□□ 0.35
NLRP1-202ENST00000269280 DAXXQ9UER7 740 aaPredicted RBP17.22■□□□□ 0.35
NLRP1-202ENST00000269280 BCANQ96GW7 911 aa17.18■□□□□ 0.34
NLRP1-202ENST00000269280 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
NLRP1-202ENST00000269280 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.34
NLRP1-202ENST00000269280 NEFMP07197 916 aa17.14■□□□□ 0.33
NLRP1-202ENST00000269280 CFDP1Q9UEE9 299 aaPredicted RBP17.13■□□□□ 0.33
NLRP1-202ENST00000269280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.334e-6■□□□□ 9.6
NLRP1-202ENST00000269280 CHGAP10645 457 aaKnown RBP17.1■□□□□ 0.33
NLRP1-202ENST00000269280 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms