RNA–Protein interactions for RNA: ENST00000269216.7

GATA6-201, Transcript of GATA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATA6, Length 3,770 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA6-201ENST00000269216 CADPSQ9ULU8 1353 aa23.35■■□□□ 1.33
GATA6-201ENST00000269216 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
GATA6-201ENST00000269216 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
GATA6-201ENST00000269216 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
GATA6-201ENST00000269216 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
GATA6-201ENST00000269216 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
GATA6-201ENST00000269216 KANK4Q5T7N3 995 aaPredicted RBP23.25■■□□□ 1.31
GATA6-201ENST00000269216 IL27Q8NEV9 243 aa23.24■■□□□ 1.31
GATA6-201ENST00000269216 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
GATA6-201ENST00000269216 SYNJ1O43426 1573 aa23.15■■□□□ 1.3
GATA6-201ENST00000269216 CHIC2Q9UKJ5 165 aa23.15■■□□□ 1.3
GATA6-201ENST00000269216 ZNF777Q9ULD5 760 aaPredicted RBP23.15■■□□□ 1.3
GATA6-201ENST00000269216 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
GATA6-201ENST00000269216 UBE2Q2Q8WVN8 375 aa23.13■■□□□ 1.29
GATA6-201ENST00000269216 VPS8Q8N3P4 1428 aa23.11■■□□□ 1.29
GATA6-201ENST00000269216 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
GATA6-201ENST00000269216 POLR3GLQ9BT43 218 aa23.1■■□□□ 1.29
GATA6-201ENST00000269216 ERICH6BQ5W0A0 696 aa23.09■■□□□ 1.29
GATA6-201ENST00000269216 FANCD2Q9BXW9 1451 aa23.07■■□□□ 1.28
GATA6-201ENST00000269216 MTUS2Q5JR59 1369 aa23.06■■□□□ 1.28
GATA6-201ENST00000269216 NOP58Q9Y2X3 529 aaKnown RBP23.06■■□□□ 1.28
GATA6-201ENST00000269216 NESP48681 1621 aa23.05■■□□□ 1.28
GATA6-201ENST00000269216 FANCIQ9NVI1 1328 aa23.03■■□□□ 1.28
GATA6-201ENST00000269216 PKNOX2Q96KN3 472 aa23■■□□□ 1.27
GATA6-201ENST00000269216 RAD54L2Q9Y4B4 1467 aa22.99■■□□□ 1.27
GATA6-201ENST00000269216 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
GATA6-201ENST00000269216 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
GATA6-201ENST00000269216 CFTRP13569 1480 aa22.97■■□□□ 1.27
GATA6-201ENST00000269216 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
GATA6-201ENST00000269216 NPM2Q86SE8 214 aaKnown RBP22.96■■□□□ 1.27
GATA6-201ENST00000269216 IGF1RP08069 1367 aa22.96■■□□□ 1.27
GATA6-201ENST00000269216 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
GATA6-201ENST00000269216 TIMELESSQ9UNS1 1208 aa22.95■■□□□ 1.27
GATA6-201ENST00000269216 ANP32AP39687 249 aaKnown RBP22.94■■□□□ 1.26
GATA6-201ENST00000269216 ZBTB47Q9UFB7 747 aaPredicted RBP22.94■■□□□ 1.26
GATA6-201ENST00000269216 ZNF326Q5BKZ1 582 aaKnown RBP22.93■■□□□ 1.26
GATA6-201ENST00000269216 RRP7BPQ9NSQ0 103 aa22.93■■□□□ 1.26
GATA6-201ENST00000269216 HIRIP3Q9BW71 556 aaPredicted RBP22.92■■□□□ 1.26
GATA6-201ENST00000269216 PAK3O75914 559 aaPredicted RBP22.88■■□□□ 1.25
GATA6-201ENST00000269216 CUX1P39880 1505 aa22.88■■□□□ 1.25
GATA6-201ENST00000269216 FHOD3Q2V2M9 1422 aa22.86■■□□□ 1.25
GATA6-201ENST00000269216 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
GATA6-201ENST00000269216 ANP32CO43423 234 aa22.86■■□□□ 1.25
GATA6-201ENST00000269216 HMGXB3Q12766 1538 aa22.86■■□□□ 1.25
GATA6-201ENST00000269216 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
GATA6-201ENST00000269216 LAS1LQ9Y4W2 734 aaKnown RBP22.85■■□□□ 1.25
GATA6-201ENST00000269216 B4GALNT3Q6L9W6 998 aa22.84■■□□□ 1.25
GATA6-201ENST00000269216 CCNB3Q8WWL7 1395 aa22.83■■□□□ 1.25
GATA6-201ENST00000269216 GLIPR1L2Q4G1C9 344 aa22.81■■□□□ 1.24
GATA6-201ENST00000269216 SIN3AQ96ST3 1273 aa22.8■■□□□ 1.24
GATA6-201ENST00000269216 NEFMP07197 916 aa22.76■■□□□ 1.23
GATA6-201ENST00000269216 PLEKHG5O94827 1062 aa22.75■■□□□ 1.23
GATA6-201ENST00000269216 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
GATA6-201ENST00000269216 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
GATA6-201ENST00000269216 VSIG10Q8N0Z9 540 aa22.73■■□□□ 1.23
GATA6-201ENST00000269216 PODXL2Q9NZ53 605 aa22.71■■□□□ 1.23
GATA6-201ENST00000269216 KIF21BO75037 1637 aa22.71■■□□□ 1.23
GATA6-201ENST00000269216 ARAP1Q96P48 1450 aa22.68■■□□□ 1.22
GATA6-201ENST00000269216 TONSLQ96HA7 1378 aa22.67■■□□□ 1.22
GATA6-201ENST00000269216 PRXQ9BXM0 1461 aa22.67■■□□□ 1.22
GATA6-201ENST00000269216 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.22
GATA6-201ENST00000269216 BRPF3Q9ULD4 1205 aa22.65■■□□□ 1.22
GATA6-201ENST00000269216 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
GATA6-201ENST00000269216 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
GATA6-201ENST00000269216 PLEKHD1A6NEE1 506 aa22.61■■□□□ 1.21
GATA6-201ENST00000269216 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
GATA6-201ENST00000269216 CFDP1Q9UEE9 299 aaPredicted RBP22.6■■□□□ 1.21
GATA6-201ENST00000269216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.59■■□□□ 1.21
GATA6-201ENST00000269216 DAXXQ9UER7 740 aaPredicted RBP22.59■■□□□ 1.21
GATA6-201ENST00000269216 TOPBP1Q92547 1522 aa22.58■■□□□ 1.21
GATA6-201ENST00000269216 ARHGAP35Q9NRY4 1499 aa22.57■■□□□ 1.2
GATA6-201ENST00000269216 RAB3GAP2Q9H2M9 1393 aa22.55■■□□□ 1.2
GATA6-201ENST00000269216 IPO9Q96P70 1041 aaKnown RBP22.53■■□□□ 1.2
GATA6-201ENST00000269216 SLC4A1APQ9BWU0 796 aaKnown RBP22.53■■□□□ 1.2
GATA6-201ENST00000269216 TSPY4P0CV99 314 aa22.52■■□□□ 1.2
GATA6-201ENST00000269216 TSPY10P0CW01 314 aa22.52■■□□□ 1.2
GATA6-201ENST00000269216 FMN1Q68DA7 1419 aa22.52■■□□□ 1.2
GATA6-201ENST00000269216 FOXD1Q16676 465 aa22.51■■□□□ 1.19
GATA6-201ENST00000269216 A0A0U1RQG5 324 aaPredicted RBP22.48■■□□□ 1.19
GATA6-201ENST00000269216 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
GATA6-201ENST00000269216 ARXQ96QS3 562 aa22.47■■□□□ 1.19
GATA6-201ENST00000269216 SENP3-EIF4A1A0A087X0R7 540 aa22.46■■□□□ 1.19
GATA6-201ENST00000269216 KDM2AQ9Y2K7 1162 aa22.46■■□□□ 1.19
GATA6-201ENST00000269216 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.19
GATA6-201ENST00000269216 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.18
GATA6-201ENST00000269216 SETD5Q9C0A6 1442 aa22.45■■□□□ 1.18
GATA6-201ENST00000269216 PHLDB1Q86UU1 1377 aa22.44■■□□□ 1.18
GATA6-201ENST00000269216 ZMYND15Q9H091 742 aa22.42■■□□□ 1.18
GATA6-201ENST00000269216 SLC24A1O60721 1099 aa22.4■■□□□ 1.18
GATA6-201ENST00000269216 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
GATA6-201ENST00000269216 ARID4BQ4LE39 1312 aaPredicted RBP22.37■■□□□ 1.17
GATA6-201ENST00000269216 NAP1L5Q96NT1 182 aaPredicted RBP22.36■■□□□ 1.17
GATA6-201ENST00000269216 RSPH6AQ9H0K4 717 aa22.36■■□□□ 1.17
GATA6-201ENST00000269216 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
GATA6-201ENST00000269216 URB2Q14146 1524 aaKnown RBP22.34■■□□□ 1.17
GATA6-201ENST00000269216 RGL3Q3MIN7 710 aa22.33■■□□□ 1.16
GATA6-201ENST00000269216 NPM1P06748 294 aaKnown RBP eCLIP22.32■■□□□ 1.16
GATA6-201ENST00000269216 BIVM-ERCC5R4GMW8 1640 aa22.31■■□□□ 1.16
GATA6-201ENST00000269216 ZNF644Q9H582 1327 aaPredicted RBP22.3■■□□□ 1.16
GATA6-201ENST00000269216 PPM1GO15355 546 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms