RNA–Protein interactions for RNA: ENST00000269216.7

GATA6-201, Transcript of GATA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATA6, Length 3,770 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA6-201ENST00000269216 NISCHQ9Y2I1 1504 aa31.52■■■□□ 2.64
GATA6-201ENST00000269216 DCAF8L2P0C7V8 631 aa29.28■■■□□ 2.28
GATA6-201ENST00000269216 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.15
GATA6-201ENST00000269216 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.1
GATA6-201ENST00000269216 PELP1Q8IZL8 1130 aaKnown RBP28.09■■■□□ 2.09
GATA6-201ENST00000269216 HRCP23327 699 aa27.67■■■□□ 2.02
GATA6-201ENST00000269216 PPARGC1BQ86YN6 1023 aaKnown RBP27.59■■■□□ 2.01
GATA6-201ENST00000269216 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
GATA6-201ENST00000269216 MYT1Q01538 1121 aa27.25■■□□□ 1.95
GATA6-201ENST00000269216 SCAF1Q9H7N4 1312 aaKnown RBP26.75■■□□□ 1.87
GATA6-201ENST00000269216 EHMT2Q96KQ7 1210 aa26.67■■□□□ 1.86
GATA6-201ENST00000269216 ABCC9O60706 1549 aa26.52■■□□□ 1.84
GATA6-201ENST00000269216 FAM9AQ8IZU1 332 aaPredicted RBP26.32■■□□□ 1.8
GATA6-201ENST00000269216 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
GATA6-201ENST00000269216 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
GATA6-201ENST00000269216 GTF3C3Q9Y5Q9 886 aa26.09■■□□□ 1.77
GATA6-201ENST00000269216 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
GATA6-201ENST00000269216 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
GATA6-201ENST00000269216 CENPBP07199 599 aaPredicted RBP25.93■■□□□ 1.74
GATA6-201ENST00000269216 ACIN1Q9UKV3 1341 aaKnown RBP25.91■■□□□ 1.74
GATA6-201ENST00000269216 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
GATA6-201ENST00000269216 NEUROD1Q13562 356 aa25.89■■□□□ 1.73
GATA6-201ENST00000269216 ZEB1P37275 1124 aaPredicted RBP25.84■■□□□ 1.73
GATA6-201ENST00000269216 LOC105371045A0A1W2PR82 267 aa25.79■■□□□ 1.72
GATA6-201ENST00000269216 TRIM26Q12899 539 aaPredicted RBP25.75■■□□□ 1.71
GATA6-201ENST00000269216 YTHDC1Q96MU7 727 aaKnown RBP25.7■■□□□ 1.7
GATA6-201ENST00000269216 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
GATA6-201ENST00000269216 BCL11AQ9H165 835 aa25.59■■□□□ 1.69
GATA6-201ENST00000269216 TTBK1Q5TCY1 1321 aaPredicted RBP25.59■■□□□ 1.69
GATA6-201ENST00000269216 RANGAP1P46060 587 aaPredicted RBP25.46■■□□□ 1.67
GATA6-201ENST00000269216 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
GATA6-201ENST00000269216 DIEXFQ68CQ4 756 aaKnown RBP25.29■■□□□ 1.64
GATA6-201ENST00000269216 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
GATA6-201ENST00000269216 UBTFP17480 764 aaKnown RBP25.21■■□□□ 1.63
GATA6-201ENST00000269216 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.62
GATA6-201ENST00000269216 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
GATA6-201ENST00000269216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.07■■□□□ 1.6
GATA6-201ENST00000269216 PRKCSHP14314 528 aaPredicted RBP25.05■■□□□ 1.6
GATA6-201ENST00000269216 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
GATA6-201ENST00000269216 NACADO15069 1562 aa24.96■■□□□ 1.59
GATA6-201ENST00000269216 ANP32EQ9BTT0 268 aa24.94■■□□□ 1.58
GATA6-201ENST00000269216 RB1CC1Q8TDY2 1594 aa24.92■■□□□ 1.58
GATA6-201ENST00000269216 APLP2Q06481 763 aa24.92■■□□□ 1.58
GATA6-201ENST00000269216 CSRNP3Q8WYN3 585 aa24.82■■□□□ 1.56
GATA6-201ENST00000269216 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
GATA6-201ENST00000269216 ERICH6Q7L0X2 663 aa24.67■■□□□ 1.54
GATA6-201ENST00000269216 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
GATA6-201ENST00000269216 BCANQ96GW7 911 aa24.55■■□□□ 1.52
GATA6-201ENST00000269216 MIER1Q8N108 512 aa24.45■■□□□ 1.5
GATA6-201ENST00000269216 ZNF316A6NFI3 1004 aaPredicted RBP24.39■■□□□ 1.5
GATA6-201ENST00000269216 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
GATA6-201ENST00000269216 TSHZ2Q9NRE2 1034 aa24.36■■□□□ 1.49
GATA6-201ENST00000269216 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
GATA6-201ENST00000269216 WIZO95785 1651 aa24.34■■□□□ 1.49
GATA6-201ENST00000269216 ITGAEP38570 1179 aa24.28■■□□□ 1.48
GATA6-201ENST00000269216 SUPT16HQ9Y5B9 1047 aaKnown RBP24.28■■□□□ 1.48
GATA6-201ENST00000269216 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
GATA6-201ENST00000269216 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
GATA6-201ENST00000269216 ABCC8Q09428 1581 aa24.08■■□□□ 1.44
GATA6-201ENST00000269216 ANO8Q9HCE9 1232 aaPredicted RBP24.07■■□□□ 1.44
GATA6-201ENST00000269216 P3H3Q8IVL6 736 aa24.06■■□□□ 1.44
GATA6-201ENST00000269216 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
GATA6-201ENST00000269216 NEFLP07196 543 aa24.01■■□□□ 1.43
GATA6-201ENST00000269216 SOGA1O94964 1423 aa24.01■■□□□ 1.43
GATA6-201ENST00000269216 CCDC136Q96JN2 1154 aa23.96■■□□□ 1.43
GATA6-201ENST00000269216 FKBP8Q14318 412 aa23.95■■□□□ 1.42
GATA6-201ENST00000269216 SMARCA4P51532 1647 aa23.92■■□□□ 1.42
GATA6-201ENST00000269216 RBM19Q9Y4C8 960 aaKnown RBP23.88■■□□□ 1.41
GATA6-201ENST00000269216 TOP2AP11388 1531 aaKnown RBP23.86■■□□□ 1.41
GATA6-201ENST00000269216 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
GATA6-201ENST00000269216 RTN4Q9NQC3 1192 aaKnown RBP23.8■■□□□ 1.4
GATA6-201ENST00000269216 CLSPNQ9HAW4 1339 aa23.79■■□□□ 1.4
GATA6-201ENST00000269216 ARID3CA6NKF2 412 aa23.79■■□□□ 1.4
GATA6-201ENST00000269216 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
GATA6-201ENST00000269216 DEKP35659 375 aaKnown RBP23.77■■□□□ 1.4
GATA6-201ENST00000269216 FBLN2P98095 1184 aa23.76■■□□□ 1.39
GATA6-201ENST00000269216 NBR1Q14596 966 aa23.76■■□□□ 1.39
GATA6-201ENST00000269216 FAM50AQ14320 339 aaKnown RBP23.75■■□□□ 1.39
GATA6-201ENST00000269216 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.75■■□□□ 1.39
GATA6-201ENST00000269216 EIF5BO60841 1220 aaKnown RBP23.74■■□□□ 1.39
GATA6-201ENST00000269216 RUSC2Q8N2Y8 1516 aa23.7■■□□□ 1.39
GATA6-201ENST00000269216 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
GATA6-201ENST00000269216 CLIP1P30622 1438 aa23.67■■□□□ 1.38
GATA6-201ENST00000269216 SMARCA2P51531 1590 aa23.66■■□□□ 1.38
GATA6-201ENST00000269216 GOLGA3Q08378 1498 aa23.62■■□□□ 1.37
GATA6-201ENST00000269216 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
GATA6-201ENST00000269216 EEA1Q15075 1411 aa23.59■■□□□ 1.37
GATA6-201ENST00000269216 BICRAQ9NZM4 1560 aa23.55■■□□□ 1.36
GATA6-201ENST00000269216 RTL5Q5HYW3 569 aaPredicted RBP23.53■■□□□ 1.36
GATA6-201ENST00000269216 CDK11AQ9UQ88 783 aaPredicted RBP23.52■■□□□ 1.36
GATA6-201ENST00000269216 MSH5O43196 834 aa23.48■■□□□ 1.35
GATA6-201ENST00000269216 CEP164Q9UPV0 1460 aa23.48■■□□□ 1.35
GATA6-201ENST00000269216 KIF27Q86VH2 1401 aa23.47■■□□□ 1.35
GATA6-201ENST00000269216 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
GATA6-201ENST00000269216 IRX6P78412 446 aaPredicted RBP23.4■■□□□ 1.34
GATA6-201ENST00000269216 CUX2O14529 1486 aa23.4■■□□□ 1.34
GATA6-201ENST00000269216 TRIM52Q96A61 297 aa23.39■■□□□ 1.33
GATA6-201ENST00000269216 UNC13AQ9UPW8 1703 aa23.38■■□□□ 1.33
GATA6-201ENST00000269216 EIF4G1Q04637 1599 aaKnown RBP23.37■■□□□ 1.33
GATA6-201ENST00000269216 KCNH8Q96L42 1107 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms