RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 P3H3Q8IVL6 736 aa24.51■■□□□ 1.51
SPG7-201ENST00000268704 SETD5Q9C0A6 1442 aa24.49■■□□□ 1.51
SPG7-201ENST00000268704 WDR97A6NE52 1622 aa24.48■■□□□ 1.51
SPG7-201ENST00000268704 LRRC9Q6ZRR7 1453 aa24.48■■□□□ 1.51
SPG7-201ENST00000268704 ATP1B4Q9UN42 357 aaPredicted RBP24.48■■□□□ 1.51
SPG7-201ENST00000268704 CARMIL1Q5VZK9 1371 aa24.48■■□□□ 1.51
SPG7-201ENST00000268704 DDX10Q13206 875 aaKnown RBP24.47■■□□□ 1.51
SPG7-201ENST00000268704 HIRIP3Q9BW71 556 aaPredicted RBP24.44■■□□□ 1.5
SPG7-201ENST00000268704 FGD5Q6ZNL6 1462 aa24.43■■□□□ 1.5
SPG7-201ENST00000268704 PRDM2Q13029 1718 aa24.43■■□□□ 1.5
SPG7-201ENST00000268704 TSHZ2Q9NRE2 1034 aa24.43■■□□□ 1.5
SPG7-201ENST00000268704 BCANQ96GW7 911 aa24.42■■□□□ 1.5
SPG7-201ENST00000268704 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
SPG7-201ENST00000268704 PCF11O94913 1555 aaKnown RBP24.4■■□□□ 1.5
SPG7-201ENST00000268704 CFAP43Q8NDM7 1665 aa24.33■■□□□ 1.49
SPG7-201ENST00000268704 FHOD3Q2V2M9 1422 aa24.33■■□□□ 1.48
SPG7-201ENST00000268704 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
SPG7-201ENST00000268704 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
SPG7-201ENST00000268704 FKBP8Q14318 412 aa24.28■■□□□ 1.48
SPG7-201ENST00000268704 PPP1R15AO75807 674 aaPredicted RBP24.28■■□□□ 1.48
SPG7-201ENST00000268704 BCL11AQ9H165 835 aa24.24■■□□□ 1.47
SPG7-201ENST00000268704 TRIM52Q96A61 297 aa24.23■■□□□ 1.47
SPG7-201ENST00000268704 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
SPG7-201ENST00000268704 NESP48681 1621 aa24.16■■□□□ 1.46
SPG7-201ENST00000268704 FYCO1Q9BQS8 1478 aa24.15■■□□□ 1.46
SPG7-201ENST00000268704 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
SPG7-201ENST00000268704 CASKIN1Q8WXD9 1431 aa24.12■■□□□ 1.45
SPG7-201ENST00000268704 ANP32CO43423 234 aa24.12■■□□□ 1.45
SPG7-201ENST00000268704 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
SPG7-201ENST00000268704 FGD6Q6ZV73 1430 aa24.09■■□□□ 1.45
SPG7-201ENST00000268704 TONSLQ96HA7 1378 aa24.09■■□□□ 1.45
SPG7-201ENST00000268704 PTPRKQ15262 1439 aa24.08■■□□□ 1.45
SPG7-201ENST00000268704 CCDC18Q5T9S5 1454 aa24.08■■□□□ 1.45
SPG7-201ENST00000268704 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
SPG7-201ENST00000268704 EFCAB5A4FU69 1503 aa24.06■■□□□ 1.44
SPG7-201ENST00000268704 ANP32EQ9BTT0 268 aa24.05■■□□□ 1.44
SPG7-201ENST00000268704 CCER2I3L3R5 266 aa24.04■■□□□ 1.44
SPG7-201ENST00000268704 ABCA10Q8WWZ4 1543 aa24.04■■□□□ 1.44
SPG7-201ENST00000268704 CTTNBP2Q8WZ74 1663 aa24.04■■□□□ 1.44
SPG7-201ENST00000268704 NEFLP07196 543 aa24.04■■□□□ 1.44
SPG7-201ENST00000268704 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
SPG7-201ENST00000268704 MTUS2Q5JR59 1369 aa24.03■■□□□ 1.44
SPG7-201ENST00000268704 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
SPG7-201ENST00000268704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.02■■□□□ 1.441e-6■■■■□ 19.5
SPG7-201ENST00000268704 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.439e-7■■■■■ 27.2
SPG7-201ENST00000268704 SNAPC4Q5SXM2 1469 aa24.01■■□□□ 1.43
SPG7-201ENST00000268704 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
SPG7-201ENST00000268704 LRRIQ1Q96JM4 1722 aa23.99■■□□□ 1.43
SPG7-201ENST00000268704 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
SPG7-201ENST00000268704 FMN1Q68DA7 1419 aa23.97■■□□□ 1.43
SPG7-201ENST00000268704 HFM1A2PYH4 1435 aa23.97■■□□□ 1.43
SPG7-201ENST00000268704 UACAQ9BZF9 1416 aa23.97■■□□□ 1.43
SPG7-201ENST00000268704 CUL7Q14999 1698 aa23.96■■□□□ 1.43
SPG7-201ENST00000268704 NAIPQ13075 1403 aa23.93■■□□□ 1.42
SPG7-201ENST00000268704 NCOA2Q15596 1464 aa23.92■■□□□ 1.42
SPG7-201ENST00000268704 RBM19Q9Y4C8 960 aaKnown RBP23.92■■□□□ 1.42
SPG7-201ENST00000268704 KDM5BQ9UGL1 1544 aa23.89■■□□□ 1.41
SPG7-201ENST00000268704 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
SPG7-201ENST00000268704 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
SPG7-201ENST00000268704 RRP7BPQ9NSQ0 103 aa23.88■■□□□ 1.41
SPG7-201ENST00000268704 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
SPG7-201ENST00000268704 MYOM3Q5VTT5 1437 aa23.88■■□□□ 1.41
SPG7-201ENST00000268704 IRX6P78412 446 aaPredicted RBP23.87■■□□□ 1.41
SPG7-201ENST00000268704 HNRNPUQ00839 825 aaKnown RBP eCLIP23.86■■□□□ 1.41
SPG7-201ENST00000268704 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
SPG7-201ENST00000268704 SAMD9Q5K651 1589 aa23.84■■□□□ 1.41
SPG7-201ENST00000268704 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
SPG7-201ENST00000268704 SUPT6HQ7KZ85 1726 aaKnown RBP23.81■■□□□ 1.4
SPG7-201ENST00000268704 URB2Q14146 1524 aaKnown RBP23.81■■□□□ 1.4
SPG7-201ENST00000268704 WASHC2AQ641Q2 1341 aa23.8■■□□□ 1.4
SPG7-201ENST00000268704 MAGI3Q5TCQ9 1506 aa23.8■■□□□ 1.4
SPG7-201ENST00000268704 HSPA5P11021 654 aaKnown RBP23.8■■□□□ 1.4
SPG7-201ENST00000268704 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
SPG7-201ENST00000268704 DENND4BO75064 1496 aaPredicted RBP23.76■■□□□ 1.39
SPG7-201ENST00000268704 EHBP1L1Q8N3D4 1523 aa23.76■■□□□ 1.39
SPG7-201ENST00000268704 KDM6BO15054 1643 aa23.76■■□□□ 1.39
SPG7-201ENST00000268704 ARID3CA6NKF2 412 aa23.75■■□□□ 1.39
SPG7-201ENST00000268704 UGGT2Q9NYU1 1516 aa23.74■■□□□ 1.39
SPG7-201ENST00000268704 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
SPG7-201ENST00000268704 FOXD1Q16676 465 aa23.74■■□□□ 1.39
SPG7-201ENST00000268704 CCDC184Q52MB2 194 aa23.74■■□□□ 1.39
SPG7-201ENST00000268704 GAPVD1Q14C86 1478 aa23.73■■□□□ 1.39
SPG7-201ENST00000268704 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
SPG7-201ENST00000268704 ARHGEF11O15085 1522 aa23.67■■□□□ 1.38
SPG7-201ENST00000268704 MSH5O43196 834 aa23.67■■□□□ 1.38
SPG7-201ENST00000268704 C11orf95C9JLR9 678 aaPredicted RBP23.66■■□□□ 1.38
SPG7-201ENST00000268704 GCC2Q8IWJ2 1684 aa23.66■■□□□ 1.38
SPG7-201ENST00000268704 HECW1Q76N89 1606 aa23.66■■□□□ 1.38
SPG7-201ENST00000268704 EIF4G2P78344 907 aaKnown RBP eCLIP23.65■■□□□ 1.38
SPG7-201ENST00000268704 L3MBTL2Q969R5 705 aa23.64■■□□□ 1.38
SPG7-201ENST00000268704 MPHOSPH9Q99550 1183 aa23.63■■□□□ 1.37
SPG7-201ENST00000268704 CDK13Q14004 1512 aaKnown RBP23.62■■□□□ 1.37
SPG7-201ENST00000268704 TCOF1Q13428 1488 aaKnown RBP23.61■■□□□ 1.37
SPG7-201ENST00000268704 CNTLNQ9NXG0 1405 aa23.6■■□□□ 1.37
SPG7-201ENST00000268704 FAM9BQ8IZU0 186 aa23.6■■□□□ 1.37
SPG7-201ENST00000268704 MRC2Q9UBG0 1479 aa23.6■■□□□ 1.37
SPG7-201ENST00000268704 EPRSP07814 1512 aaKnown RBP23.56■■□□□ 1.36
SPG7-201ENST00000268704 CDK11AQ9UQ88 783 aaPredicted RBP23.55■■□□□ 1.36
SPG7-201ENST00000268704 NBPF8Q3BBV2 869 aa23.54■■□□□ 1.36
SPG7-201ENST00000268704 PRKRIP1Q9H875 184 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms