RNA–Protein interactions for RNA: ENST00000264694.12

SNX25-201, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX25, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-201ENST00000264694 PPP1R15AO75807 674 aaPredicted RBP18.76■□□□□ 0.59
SNX25-201ENST00000264694 SETD5Q9C0A6 1442 aa18.73■□□□□ 0.59
SNX25-201ENST00000264694 ANP32CO43423 234 aa18.72■□□□□ 0.59
SNX25-201ENST00000264694 PRKCSHP14314 528 aaPredicted RBP18.71■□□□□ 0.59
SNX25-201ENST00000264694 KIF27Q86VH2 1401 aa18.71■□□□□ 0.59
SNX25-201ENST00000264694 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.59
SNX25-201ENST00000264694 ATP1B4Q9UN42 357 aaPredicted RBP18.69■□□□□ 0.58
SNX25-201ENST00000264694 MSH5O43196 834 aa18.68■□□□□ 0.58
SNX25-201ENST00000264694 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
SNX25-201ENST00000264694 CUX1P39880 1505 aa18.66■□□□□ 0.58
SNX25-201ENST00000264694 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
SNX25-201ENST00000264694 CCER2I3L3R5 266 aa18.64■□□□□ 0.57
SNX25-201ENST00000264694 P3H3Q8IVL6 736 aa18.64■□□□□ 0.57
SNX25-201ENST00000264694 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
SNX25-201ENST00000264694 LRRC9Q6ZRR7 1453 aa18.57■□□□□ 0.56
SNX25-201ENST00000264694 HNRNPUQ00839 825 aaKnown RBP eCLIP18.57■□□□□ 0.56
SNX25-201ENST00000264694 ERICH6Q7L0X2 663 aa18.53■□□□□ 0.56
SNX25-201ENST00000264694 TIMELESSQ9UNS1 1208 aa18.52■□□□□ 0.56
SNX25-201ENST00000264694 TONSLQ96HA7 1378 aa18.51■□□□□ 0.55
SNX25-201ENST00000264694 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
SNX25-201ENST00000264694 IGF1RP08069 1367 aa18.5■□□□□ 0.55
SNX25-201ENST00000264694 CARMIL1Q5VZK9 1371 aa18.45■□□□□ 0.54
SNX25-201ENST00000264694 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
SNX25-201ENST00000264694 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
SNX25-201ENST00000264694 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
SNX25-201ENST00000264694 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
SNX25-201ENST00000264694 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
SNX25-201ENST00000264694 CFTRP13569 1480 aa18.37■□□□□ 0.53
SNX25-201ENST00000264694 CCDC184Q52MB2 194 aa18.37■□□□□ 0.53
SNX25-201ENST00000264694 B4GALNT3Q6L9W6 998 aa18.35■□□□□ 0.53
SNX25-201ENST00000264694 CCDC18Q5T9S5 1454 aa18.34■□□□□ 0.53
SNX25-201ENST00000264694 WASHC2AQ641Q2 1341 aa18.33■□□□□ 0.52
SNX25-201ENST00000264694 HSPA5P11021 654 aaKnown RBP18.32■□□□□ 0.52
SNX25-201ENST00000264694 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
SNX25-201ENST00000264694 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
SNX25-201ENST00000264694 PPP4R2Q9NY27 417 aa18.32■□□□□ 0.52
SNX25-201ENST00000264694 CFAP43Q8NDM7 1665 aa18.32■□□□□ 0.52
SNX25-201ENST00000264694 PTPRKQ15262 1439 aa18.3■□□□□ 0.52
SNX25-201ENST00000264694 FGD6Q6ZV73 1430 aa18.29■□□□□ 0.52
SNX25-201ENST00000264694 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
SNX25-201ENST00000264694 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
SNX25-201ENST00000264694 UACAQ9BZF9 1416 aa18.27■□□□□ 0.52
SNX25-201ENST00000264694 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.51
SNX25-201ENST00000264694 DEKP35659 375 aaKnown RBP18.26■□□□□ 0.51
SNX25-201ENST00000264694 MTUS2Q5JR59 1369 aa18.24■□□□□ 0.51
SNX25-201ENST00000264694 NBR1Q14596 966 aa18.24■□□□□ 0.51
SNX25-201ENST00000264694 RRP7BPQ9NSQ0 103 aa18.24■□□□□ 0.51
SNX25-201ENST00000264694 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.23■□□□□ 0.51
SNX25-201ENST00000264694 CHIC2Q9UKJ5 165 aa18.23■□□□□ 0.51
SNX25-201ENST00000264694 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
SNX25-201ENST00000264694 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
SNX25-201ENST00000264694 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
SNX25-201ENST00000264694 FYCO1Q9BQS8 1478 aa18.22■□□□□ 0.51
SNX25-201ENST00000264694 CASKIN1Q8WXD9 1431 aa18.22■□□□□ 0.51
SNX25-201ENST00000264694 NAIPQ13075 1403 aa18.21■□□□□ 0.51
SNX25-201ENST00000264694 KDM5BQ9UGL1 1544 aa18.2■□□□□ 0.5
SNX25-201ENST00000264694 C11orf95C9JLR9 678 aaPredicted RBP18.2■□□□□ 0.5
SNX25-201ENST00000264694 EIF4G2P78344 907 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNX25-201ENST00000264694 PTPN23Q9H3S7 1636 aa18.2■□□□□ 0.5
SNX25-201ENST00000264694 ERICH6BQ5W0A0 696 aa18.2■□□□□ 0.5
SNX25-201ENST00000264694 PAK3O75914 559 aaPredicted RBP18.18■□□□□ 0.5
SNX25-201ENST00000264694 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
SNX25-201ENST00000264694 PRKRIP1Q9H875 184 aaPredicted RBP18.17■□□□□ 0.5
SNX25-201ENST00000264694 FOXD1Q16676 465 aa18.17■□□□□ 0.5
SNX25-201ENST00000264694 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
SNX25-201ENST00000264694 CNTLNQ9NXG0 1405 aa18.16■□□□□ 0.5
SNX25-201ENST00000264694 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
SNX25-201ENST00000264694 FMN1Q68DA7 1419 aa18.13■□□□□ 0.49
SNX25-201ENST00000264694 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
SNX25-201ENST00000264694 L3MBTL2Q969R5 705 aa18.12■□□□□ 0.49
SNX25-201ENST00000264694 ZBED9Q6R2W3 1325 aa18.12■□□□□ 0.49
SNX25-201ENST00000264694 MYT1LQ9UL68 1186 aa18.11■□□□□ 0.49
SNX25-201ENST00000264694 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
SNX25-201ENST00000264694 CCDC7Q96M83 1385 aa18.09■□□□□ 0.49
SNX25-201ENST00000264694 MYOM3Q5VTT5 1437 aa18.09■□□□□ 0.49
SNX25-201ENST00000264694 EFCAB5A4FU69 1503 aa18.08■□□□□ 0.49
SNX25-201ENST00000264694 ANO8Q9HCE9 1232 aaPredicted RBP18.08■□□□□ 0.48
SNX25-201ENST00000264694 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
SNX25-201ENST00000264694 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
SNX25-201ENST00000264694 POLR3GLQ9BT43 218 aa18.06■□□□□ 0.48
SNX25-201ENST00000264694 DENND4BO75064 1496 aaPredicted RBP18.05■□□□□ 0.48
SNX25-201ENST00000264694 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
SNX25-201ENST00000264694 NBPF8Q3BBV2 869 aa18.04■□□□□ 0.48
SNX25-201ENST00000264694 CCDC136Q96JN2 1154 aa18.04■□□□□ 0.48
SNX25-201ENST00000264694 NCOA1Q15788 1441 aa18.03■□□□□ 0.48
SNX25-201ENST00000264694 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
SNX25-201ENST00000264694 KIF7Q2M1P5 1343 aa18.02■□□□□ 0.48
SNX25-201ENST00000264694 PRDM2Q13029 1718 aa18.02■□□□□ 0.48
SNX25-201ENST00000264694 ANP32AP39687 249 aaKnown RBP18■□□□□ 0.47
SNX25-201ENST00000264694 KDM6BO15054 1643 aa17.99■□□□□ 0.47
SNX25-201ENST00000264694 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
SNX25-201ENST00000264694 IPO9Q96P70 1041 aaKnown RBP17.96■□□□□ 0.47
SNX25-201ENST00000264694 LRRIQ1Q96JM4 1722 aa17.96■□□□□ 0.47
SNX25-201ENST00000264694 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
SNX25-201ENST00000264694 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.46
SNX25-201ENST00000264694 ZBTB47Q9UFB7 747 aaPredicted RBP17.96■□□□□ 0.46
SNX25-201ENST00000264694 NUDCQ9Y266 331 aa17.95■□□□□ 0.46
SNX25-201ENST00000264694 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
SNX25-201ENST00000264694 CTTNBP2Q8WZ74 1663 aa17.94■□□□□ 0.46
SNX25-201ENST00000264694 SUPT6HQ7KZ85 1726 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms