RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 NEFLP07196 543 aa19.88■□□□□ 0.77
SCARF1-201ENST00000263071 IRX6P78412 446 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-201ENST00000263071 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
SCARF1-201ENST00000263071 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
SCARF1-201ENST00000263071 PLEKHG5O94827 1062 aa19.81■□□□□ 0.76
SCARF1-201ENST00000263071 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
SCARF1-201ENST00000263071 ARID3CA6NKF2 412 aa19.79■□□□□ 0.76
SCARF1-201ENST00000263071 DAXXQ9UER7 740 aaPredicted RBP19.79■□□□□ 0.76
SCARF1-201ENST00000263071 NBR1Q14596 966 aa19.77■□□□□ 0.76
SCARF1-201ENST00000263071 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
SCARF1-201ENST00000263071 SENP3-EIF4A1A0A087X0R7 540 aa19.76■□□□□ 0.75
SCARF1-201ENST00000263071 KIF21BO75037 1637 aa19.74■□□□□ 0.75
SCARF1-201ENST00000263071 PODXL2Q9NZ53 605 aa19.73■□□□□ 0.75
SCARF1-201ENST00000263071 FANCIQ9NVI1 1328 aa19.73■□□□□ 0.75
SCARF1-201ENST00000263071 IL27Q8NEV9 243 aa19.71■□□□□ 0.75
SCARF1-201ENST00000263071 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
SCARF1-201ENST00000263071 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
SCARF1-201ENST00000263071 ANP32CO43423 234 aa19.67■□□□□ 0.74
SCARF1-201ENST00000263071 POLR3GLQ9BT43 218 aa19.67■□□□□ 0.74
SCARF1-201ENST00000263071 RTL5Q5HYW3 569 aaPredicted RBP19.66■□□□□ 0.74
SCARF1-201ENST00000263071 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.73
SCARF1-201ENST00000263071 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
SCARF1-201ENST00000263071 CHIC2Q9UKJ5 165 aa19.61■□□□□ 0.73
SCARF1-201ENST00000263071 HNRNPUQ00839 825 aaKnown RBP eCLIP19.59■□□□□ 0.73
SCARF1-201ENST00000263071 KIF27Q86VH2 1401 aa19.54■□□□□ 0.72
SCARF1-201ENST00000263071 RRP7BPQ9NSQ0 103 aa19.49■□□□□ 0.71
SCARF1-201ENST00000263071 GLIPR1L2Q4G1C9 344 aa19.48■□□□□ 0.71
SCARF1-201ENST00000263071 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
SCARF1-201ENST00000263071 FAM9BQ8IZU0 186 aa19.48■□□□□ 0.71
SCARF1-201ENST00000263071 CUX2O14529 1486 aa19.47■□□□□ 0.71
SCARF1-201ENST00000263071 NOP58Q9Y2X3 529 aaKnown RBP19.45■□□□□ 0.7
SCARF1-201ENST00000263071 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
SCARF1-201ENST00000263071 ZNF326Q5BKZ1 582 aaKnown RBP19.44■□□□□ 0.7
SCARF1-201ENST00000263071 PHLDB1Q86UU1 1377 aa19.43■□□□□ 0.7
SCARF1-201ENST00000263071 FOXD1Q16676 465 aa19.43■□□□□ 0.7
SCARF1-201ENST00000263071 SETD5Q9C0A6 1442 aa19.43■□□□□ 0.7
SCARF1-201ENST00000263071 ARHGAP35Q9NRY4 1499 aa19.4■□□□□ 0.7
SCARF1-201ENST00000263071 CARMIL1Q5VZK9 1371 aa19.39■□□□□ 0.7
SCARF1-201ENST00000263071 PRXQ9BXM0 1461 aa19.38■□□□□ 0.69
SCARF1-201ENST00000263071 PPP1R15AO75807 674 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-201ENST00000263071 TIMELESSQ9UNS1 1208 aa19.37■□□□□ 0.69
SCARF1-201ENST00000263071 CUX1P39880 1505 aa19.36■□□□□ 0.69
SCARF1-201ENST00000263071 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
SCARF1-201ENST00000263071 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
SCARF1-201ENST00000263071 WDR97A6NE52 1622 aa19.35■□□□□ 0.69
SCARF1-201ENST00000263071 RRBP1Q9P2E9 1410 aaKnown RBP19.35■□□□□ 0.69
SCARF1-201ENST00000263071 VSIG10Q8N0Z9 540 aa19.32■□□□□ 0.68
SCARF1-201ENST00000263071 IGF1RP08069 1367 aa19.32■□□□□ 0.68
SCARF1-201ENST00000263071 MTUS2Q5JR59 1369 aa19.3■□□□□ 0.68
SCARF1-201ENST00000263071 B4GALNT3Q6L9W6 998 aa19.3■□□□□ 0.68
SCARF1-201ENST00000263071 PAK3O75914 559 aaPredicted RBP19.28■□□□□ 0.68
SCARF1-201ENST00000263071 ZMYND15Q9H091 742 aa19.28■□□□□ 0.68
SCARF1-201ENST00000263071 CCDC184Q52MB2 194 aa19.26■□□□□ 0.67
SCARF1-201ENST00000263071 MRS2Q9HD23 443 aa19.24■□□□□ 0.67
SCARF1-201ENST00000263071 HSPA5P11021 654 aaKnown RBP19.23■□□□□ 0.67
SCARF1-201ENST00000263071 MAPKBP1O60336 1514 aa19.22■□□□□ 0.67
SCARF1-201ENST00000263071 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
SCARF1-201ENST00000263071 ZBTB47Q9UFB7 747 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-201ENST00000263071 LRRC9Q6ZRR7 1453 aa19.17■□□□□ 0.66
SCARF1-201ENST00000263071 RSPH6AQ9H0K4 717 aa19.17■□□□□ 0.66
SCARF1-201ENST00000263071 ANP32AP39687 249 aaKnown RBP19.16■□□□□ 0.66
SCARF1-201ENST00000263071 A0A0U1RQG5 324 aaPredicted RBP19.16■□□□□ 0.66
SCARF1-201ENST00000263071 ZNF777Q9ULD5 760 aaPredicted RBP19.16■□□□□ 0.66
SCARF1-201ENST00000263071 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
SCARF1-201ENST00000263071 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
SCARF1-201ENST00000263071 CFTRP13569 1480 aa19.14■□□□□ 0.66
SCARF1-201ENST00000263071 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
SCARF1-201ENST00000263071 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
SCARF1-201ENST00000263071 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
SCARF1-201ENST00000263071 EIF4G2P78344 907 aaKnown RBP eCLIP19.13■□□□□ 0.65
SCARF1-201ENST00000263071 BRPF3Q9ULD4 1205 aa19.12■□□□□ 0.65
SCARF1-201ENST00000263071 NEFMP07197 916 aa19.1■□□□□ 0.65
SCARF1-201ENST00000263071 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
SCARF1-201ENST00000263071 NPM2Q86SE8 214 aaKnown RBP19.09■□□□□ 0.65
SCARF1-201ENST00000263071 L3MBTL2Q969R5 705 aa19.09■□□□□ 0.65
SCARF1-201ENST00000263071 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.65
SCARF1-201ENST00000263071 WASHC2AQ641Q2 1341 aa19.08■□□□□ 0.65
SCARF1-201ENST00000263071 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
SCARF1-201ENST00000263071 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
SCARF1-201ENST00000263071 TIAM1Q13009 1591 aa19.05■□□□□ 0.64
SCARF1-201ENST00000263071 C11orf95C9JLR9 678 aaPredicted RBP19.05■□□□□ 0.64
SCARF1-201ENST00000263071 KDM2AQ9Y2K7 1162 aa19.03■□□□□ 0.64
SCARF1-201ENST00000263071 IPO9Q96P70 1041 aaKnown RBP19.03■□□□□ 0.64
SCARF1-201ENST00000263071 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
SCARF1-201ENST00000263071 CCDC18Q5T9S5 1454 aa19.02■□□□□ 0.64
SCARF1-201ENST00000263071 HMGXB3Q12766 1538 aa19.02■□□□□ 0.63
SCARF1-201ENST00000263071 NESP48681 1621 aa19.01■□□□□ 0.63
SCARF1-201ENST00000263071 FBLN2P98095 1184 aa19■□□□□ 0.63
SCARF1-201ENST00000263071 MPHOSPH9Q99550 1183 aa18.99■□□□□ 0.63
SCARF1-201ENST00000263071 PTPRKQ15262 1439 aa18.98■□□□□ 0.63
SCARF1-201ENST00000263071 PPP4R2Q9NY27 417 aa18.98■□□□□ 0.63
SCARF1-201ENST00000263071 LAS1LQ9Y4W2 734 aaKnown RBP18.97■□□□□ 0.63
SCARF1-201ENST00000263071 FGD6Q6ZV73 1430 aa18.96■□□□□ 0.63
SCARF1-201ENST00000263071 PDE4CQ08493 712 aa18.96■□□□□ 0.63
SCARF1-201ENST00000263071 ZNF644Q9H582 1327 aaPredicted RBP18.95■□□□□ 0.62
SCARF1-201ENST00000263071 PCF11O94913 1555 aaKnown RBP18.95■□□□□ 0.62
SCARF1-201ENST00000263071 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.62
SCARF1-201ENST00000263071 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-201ENST00000263071 USP35Q9P2H5 1018 aa18.92■□□□□ 0.62
SCARF1-201ENST00000263071 FANCD2Q9BXW9 1451 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms