RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 NISCHQ9Y2I1 1504 aa26.57■■□□□ 1.84
SCARF1-201ENST00000263071 SHROOM4Q9ULL8 1493 aa24.42■■□□□ 1.5
SCARF1-201ENST00000263071 PELP1Q8IZL8 1130 aaKnown RBP24.41■■□□□ 1.5
SCARF1-201ENST00000263071 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
SCARF1-201ENST00000263071 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
SCARF1-201ENST00000263071 MYT1Q01538 1121 aa23.83■■□□□ 1.41
SCARF1-201ENST00000263071 HRCP23327 699 aa23.47■■□□□ 1.35
SCARF1-201ENST00000263071 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
SCARF1-201ENST00000263071 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.32
SCARF1-201ENST00000263071 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
SCARF1-201ENST00000263071 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
SCARF1-201ENST00000263071 LOC105371045A0A1W2PR82 267 aa22.87■■□□□ 1.25
SCARF1-201ENST00000263071 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
SCARF1-201ENST00000263071 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
SCARF1-201ENST00000263071 FAM9AQ8IZU1 332 aaPredicted RBP22.62■■□□□ 1.21
SCARF1-201ENST00000263071 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.2
SCARF1-201ENST00000263071 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
SCARF1-201ENST00000263071 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
SCARF1-201ENST00000263071 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
SCARF1-201ENST00000263071 BCL11AQ9H165 835 aa22.08■■□□□ 1.12
SCARF1-201ENST00000263071 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
SCARF1-201ENST00000263071 ACIN1Q9UKV3 1341 aaKnown RBP21.98■■□□□ 1.11
SCARF1-201ENST00000263071 PRKCSHP14314 528 aaPredicted RBP21.98■■□□□ 1.11
SCARF1-201ENST00000263071 GTF3C3Q9Y5Q9 886 aa21.96■■□□□ 1.11
SCARF1-201ENST00000263071 CENPBP07199 599 aaPredicted RBP21.94■■□□□ 1.1
SCARF1-201ENST00000263071 NEUROD1Q13562 356 aa21.86■■□□□ 1.09
SCARF1-201ENST00000263071 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
SCARF1-201ENST00000263071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.76■■□□□ 1.07
SCARF1-201ENST00000263071 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
SCARF1-201ENST00000263071 CCER1Q8TC90 406 aaPredicted RBP21.67■■□□□ 1.06
SCARF1-201ENST00000263071 ERICH6Q7L0X2 663 aa21.65■■□□□ 1.06
SCARF1-201ENST00000263071 RANGAP1P46060 587 aaPredicted RBP21.48■■□□□ 1.03
SCARF1-201ENST00000263071 YTHDC1Q96MU7 727 aaKnown RBP21.46■■□□□ 1.03
SCARF1-201ENST00000263071 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
SCARF1-201ENST00000263071 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
SCARF1-201ENST00000263071 ANP32EQ9BTT0 268 aa21.36■■□□□ 1.01
SCARF1-201ENST00000263071 ABCC9O60706 1549 aa21.33■■□□□ 1.01
SCARF1-201ENST00000263071 UBTFP17480 764 aaKnown RBP21.27■■□□□ 1
SCARF1-201ENST00000263071 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
SCARF1-201ENST00000263071 RB1CC1Q8TDY2 1594 aa21.2■□□□□ 0.98
SCARF1-201ENST00000263071 APLP2Q06481 763 aa21.17■□□□□ 0.98
SCARF1-201ENST00000263071 HNRNPUL2Q1KMD3 747 aaKnown RBP21.16■□□□□ 0.98
SCARF1-201ENST00000263071 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
SCARF1-201ENST00000263071 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
SCARF1-201ENST00000263071 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
SCARF1-201ENST00000263071 MROH2BQ7Z745 1585 aa20.88■□□□□ 0.93
SCARF1-201ENST00000263071 WIZO95785 1651 aa20.76■□□□□ 0.91
SCARF1-201ENST00000263071 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
SCARF1-201ENST00000263071 MIER1Q8N108 512 aa20.75■□□□□ 0.91
SCARF1-201ENST00000263071 ITGAEP38570 1179 aa20.74■□□□□ 0.91
SCARF1-201ENST00000263071 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
SCARF1-201ENST00000263071 SOGA1O94964 1423 aa20.72■□□□□ 0.91
SCARF1-201ENST00000263071 TSHZ2Q9NRE2 1034 aa20.71■□□□□ 0.91
SCARF1-201ENST00000263071 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
SCARF1-201ENST00000263071 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
SCARF1-201ENST00000263071 ANO8Q9HCE9 1232 aaPredicted RBP20.61■□□□□ 0.89
SCARF1-201ENST00000263071 RUSC2Q8N2Y8 1516 aa20.59■□□□□ 0.89
SCARF1-201ENST00000263071 NACADO15069 1562 aa20.57■□□□□ 0.88
SCARF1-201ENST00000263071 SUPT16HQ9Y5B9 1047 aaKnown RBP20.52■□□□□ 0.88
SCARF1-201ENST00000263071 BCANQ96GW7 911 aa20.49■□□□□ 0.87
SCARF1-201ENST00000263071 ATP1B4Q9UN42 357 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-201ENST00000263071 CLSPNQ9HAW4 1339 aa20.42■□□□□ 0.86
SCARF1-201ENST00000263071 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
SCARF1-201ENST00000263071 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
SCARF1-201ENST00000263071 SLC24A1O60721 1099 aa20.3■□□□□ 0.84
SCARF1-201ENST00000263071 CLIP1P30622 1438 aa20.28■□□□□ 0.84
SCARF1-201ENST00000263071 EIF5BO60841 1220 aaKnown RBP20.28■□□□□ 0.84
SCARF1-201ENST00000263071 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.84
SCARF1-201ENST00000263071 HIRIP3Q9BW71 556 aaPredicted RBP20.26■□□□□ 0.83
SCARF1-201ENST00000263071 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
SCARF1-201ENST00000263071 UBE2Q2Q8WVN8 375 aa20.23■□□□□ 0.83
SCARF1-201ENST00000263071 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
SCARF1-201ENST00000263071 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
SCARF1-201ENST00000263071 RBM19Q9Y4C8 960 aaKnown RBP20.19■□□□□ 0.82
SCARF1-201ENST00000263071 KANK4Q5T7N3 995 aaPredicted RBP20.19■□□□□ 0.82
SCARF1-201ENST00000263071 KCNH8Q96L42 1107 aa20.18■□□□□ 0.82
SCARF1-201ENST00000263071 P3H3Q8IVL6 736 aa20.17■□□□□ 0.82
SCARF1-201ENST00000263071 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
SCARF1-201ENST00000263071 DEKP35659 375 aaKnown RBP20.16■□□□□ 0.82
SCARF1-201ENST00000263071 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
SCARF1-201ENST00000263071 MYT1LQ9UL68 1186 aa20.15■□□□□ 0.82
SCARF1-201ENST00000263071 SMARCA2P51531 1590 aa20.15■□□□□ 0.82
SCARF1-201ENST00000263071 FAM50AQ14320 339 aaKnown RBP20.12■□□□□ 0.81
SCARF1-201ENST00000263071 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
SCARF1-201ENST00000263071 DDX10Q13206 875 aaKnown RBP20.07■□□□□ 0.8
SCARF1-201ENST00000263071 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
SCARF1-201ENST00000263071 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.03■□□□□ 0.8
SCARF1-201ENST00000263071 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.8
SCARF1-201ENST00000263071 FKBP8Q14318 412 aa20.01■□□□□ 0.79
SCARF1-201ENST00000263071 ERICH6BQ5W0A0 696 aa20.01■□□□□ 0.79
SCARF1-201ENST00000263071 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
SCARF1-201ENST00000263071 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
SCARF1-201ENST00000263071 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
SCARF1-201ENST00000263071 EEA1Q15075 1411 aa19.99■□□□□ 0.79
SCARF1-201ENST00000263071 SIN3AQ96ST3 1273 aa19.99■□□□□ 0.79
SCARF1-201ENST00000263071 MSH5O43196 834 aa19.98■□□□□ 0.79
SCARF1-201ENST00000263071 VPS8Q8N3P4 1428 aa19.97■□□□□ 0.79
SCARF1-201ENST00000263071 PKNOX2Q96KN3 472 aa19.91■□□□□ 0.78
SCARF1-201ENST00000263071 RTN4Q9NQC3 1192 aaKnown RBP19.89■□□□□ 0.77
SCARF1-201ENST00000263071 DHX57Q6P158 1386 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms