RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 DHX57Q6P158 1386 aaKnown RBP33.37■■■□□ 2.93
MCF2L-201ENST00000261963 URB2Q14146 1524 aaKnown RBP33.33■■■□□ 2.93
MCF2L-201ENST00000261963 CLSPNQ9HAW4 1339 aa33.31■■■□□ 2.92
MCF2L-201ENST00000261963 FHAD1B1AJZ9 1412 aa33.27■■■□□ 2.92
MCF2L-201ENST00000261963 CUL7Q14999 1698 aa33.27■■■□□ 2.92
MCF2L-201ENST00000261963 LRRC9Q6ZRR7 1453 aa33.25■■■□□ 2.91
MCF2L-201ENST00000261963 DNAJC5BQ9UF47 199 aa33.23■■■□□ 2.91
MCF2L-201ENST00000261963 WDR97A6NE52 1622 aa33.23■■■□□ 2.91
MCF2L-201ENST00000261963 P3H3Q8IVL6 736 aa33.21■■■□□ 2.91
MCF2L-201ENST00000261963 PCF11O94913 1555 aaKnown RBP33.21■■■□□ 2.91
MCF2L-201ENST00000261963 FHOD3Q2V2M9 1422 aa33.18■■■□□ 2.9
MCF2L-201ENST00000261963 EFCAB5A4FU69 1503 aa33.17■■■□□ 2.9
MCF2L-201ENST00000261963 PDS5BQ9NTI5 1447 aa33.16■■■□□ 2.9
MCF2L-201ENST00000261963 CFAP43Q8NDM7 1665 aa33.15■■■□□ 2.9
MCF2L-201ENST00000261963 PHLDB1Q86UU1 1377 aa33.13■■■□□ 2.89
MCF2L-201ENST00000261963 ABCA5Q8WWZ7 1642 aa33.12■■■□□ 2.89
MCF2L-201ENST00000261963 CTTNBP2Q8WZ74 1663 aa33.11■■■□□ 2.89
MCF2L-201ENST00000261963 TDRD9Q8NDG6 1382 aaKnown RBP33.11■■■□□ 2.89
MCF2L-201ENST00000261963 ITGAEP38570 1179 aa33.1■■■□□ 2.89
MCF2L-201ENST00000261963 YTHDC1Q96MU7 727 aaKnown RBP33.1■■■□□ 2.89
MCF2L-201ENST00000261963 FYCO1Q9BQS8 1478 aa33.08■■■□□ 2.89
MCF2L-201ENST00000261963 CASKIN1Q8WXD9 1431 aa33.06■■■□□ 2.88
MCF2L-201ENST00000261963 AQRO60306 1485 aaKnown RBP eCLIP33.05■■■□□ 2.88
MCF2L-201ENST00000261963 GAPVD1Q14C86 1478 aa33.05■■■□□ 2.88
MCF2L-201ENST00000261963 KIF21AQ7Z4S6 1674 aa33.02■■■□□ 2.88
MCF2L-201ENST00000261963 RAB3GAP2Q9H2M9 1393 aa33.01■■■□□ 2.87
MCF2L-201ENST00000261963 ATP1B4Q9UN42 357 aaPredicted RBP32.99■■■□□ 2.87
MCF2L-201ENST00000261963 FMN1Q68DA7 1419 aa32.93■■■□□ 2.86
MCF2L-201ENST00000261963 MIER1Q8N108 512 aa32.93■■■□□ 2.86
MCF2L-201ENST00000261963 SNAPC4Q5SXM2 1469 aa32.92■■■□□ 2.86
MCF2L-201ENST00000261963 TARBP1Q13395 1621 aaKnown RBP32.91■■■□□ 2.86
MCF2L-201ENST00000261963 SETD5Q9C0A6 1442 aa32.91■■■□□ 2.86
MCF2L-201ENST00000261963 SAMD9Q5K651 1589 aa32.91■■■□□ 2.86
MCF2L-201ENST00000261963 FAM50AQ14320 339 aaKnown RBP32.88■■■□□ 2.85
MCF2L-201ENST00000261963 MAPKBP1O60336 1514 aa32.87■■■□□ 2.85
MCF2L-201ENST00000261963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.79■■■□□ 2.841e-7■■□□□ 13.6
MCF2L-201ENST00000261963 GRIN2BQ13224 1484 aa32.74■■■□□ 2.83
MCF2L-201ENST00000261963 LRRIQ1Q96JM4 1722 aa32.71■■■□□ 2.83
MCF2L-201ENST00000261963 FGD6Q6ZV73 1430 aa32.71■■■□□ 2.83
MCF2L-201ENST00000261963 MTUS2Q5JR59 1369 aa32.69■■■□□ 2.82
MCF2L-201ENST00000261963 MRC2Q9UBG0 1479 aa32.69■■■□□ 2.82
MCF2L-201ENST00000261963 PBRM1Q86U86 1689 aa32.67■■■□□ 2.82
MCF2L-201ENST00000261963 THOC2Q8NI27 1593 aaKnown RBP32.66■■■□□ 2.82
MCF2L-201ENST00000261963 ADAMTS12P58397 1594 aa32.61■■■□□ 2.81
MCF2L-201ENST00000261963 NCOA2Q15596 1464 aa32.59■■■□□ 2.81
MCF2L-201ENST00000261963 EHBP1L1Q8N3D4 1523 aa32.54■■■□□ 2.8
MCF2L-201ENST00000261963 IQGAP2Q13576 1575 aa32.53■■■□□ 2.8
MCF2L-201ENST00000261963 PTPRKQ15262 1439 aa32.53■■■□□ 2.8
MCF2L-201ENST00000261963 MYOM3Q5VTT5 1437 aa32.53■■■□□ 2.8
MCF2L-201ENST00000261963 SIN3AQ96ST3 1273 aa32.53■■■□□ 2.8
MCF2L-201ENST00000261963 MAGI3Q5TCQ9 1506 aa32.5■■■□□ 2.79
MCF2L-201ENST00000261963 SUPT6HQ7KZ85 1726 aaKnown RBP32.5■■■□□ 2.79
MCF2L-201ENST00000261963 ARHGEF11O15085 1522 aa32.48■■■□□ 2.79
MCF2L-201ENST00000261963 CCDC18Q5T9S5 1454 aa32.47■■■□□ 2.79
MCF2L-201ENST00000261963 IFT140Q96RY7 1462 aa32.46■■■□□ 2.79
MCF2L-201ENST00000261963 UGGT2Q9NYU1 1516 aa32.46■■■□□ 2.79
MCF2L-201ENST00000261963 ZNF608Q9ULD9 1512 aaPredicted RBP32.46■■■□□ 2.79
MCF2L-201ENST00000261963 HFM1A2PYH4 1435 aa32.45■■■□□ 2.79
MCF2L-201ENST00000261963 WDR62O43379 1518 aa32.44■■■□□ 2.78
MCF2L-201ENST00000261963 HECW1Q76N89 1606 aa32.42■■■□□ 2.78
MCF2L-201ENST00000261963 SUPT16HQ9Y5B9 1047 aaKnown RBP32.41■■■□□ 2.78
MCF2L-201ENST00000261963 TIMELESSQ9UNS1 1208 aa32.4■■■□□ 2.78
MCF2L-201ENST00000261963 PTPN23Q9H3S7 1636 aa32.39■■■□□ 2.78
MCF2L-201ENST00000261963 EPRSP07814 1512 aaKnown RBP32.38■■■□□ 2.77
MCF2L-201ENST00000261963 NAIPQ13075 1403 aa32.36■■■□□ 2.77
MCF2L-201ENST00000261963 UACAQ9BZF9 1416 aa32.33■■■□□ 2.77
MCF2L-201ENST00000261963 CDK13Q14004 1512 aaKnown RBP32.3■■■□□ 2.76
MCF2L-201ENST00000261963 TCOF1Q13428 1488 aaKnown RBP32.3■■■□□ 2.76
MCF2L-201ENST00000261963 ANP32EQ9BTT0 268 aa32.3■■■□□ 2.76
MCF2L-201ENST00000261963 KIAA0586Q9BVV6 1533 aa32.27■■■□□ 2.76
MCF2L-201ENST00000261963 PPP1R15AO75807 674 aaPredicted RBP32.27■■■□□ 2.76
MCF2L-201ENST00000261963 DISP1Q96F81 1524 aa32.23■■■□□ 2.75
MCF2L-201ENST00000261963 TSHZ2Q9NRE2 1034 aa32.23■■■□□ 2.75
MCF2L-201ENST00000261963 EIF4G3O43432 1585 aaKnown RBP32.22■■■□□ 2.75
MCF2L-201ENST00000261963 KIAA0556O60303 1618 aa32.21■■■□□ 2.75
MCF2L-201ENST00000261963 GRIN2AQ12879 1464 aa32.2■■■□□ 2.75
MCF2L-201ENST00000261963 ARID3CA6NKF2 412 aa32.18■■■□□ 2.74
MCF2L-201ENST00000261963 MIA2Q96PC5 1412 aa32.17■■■□□ 2.74
MCF2L-201ENST00000261963 RRP7BPQ9NSQ0 103 aa32.13■■■□□ 2.73
MCF2L-201ENST00000261963 TONSLQ96HA7 1378 aa32.12■■■□□ 2.73
MCF2L-201ENST00000261963 ERCC6Q03468 1493 aa32.12■■■□□ 2.73
MCF2L-201ENST00000261963 AKNAQ7Z591 1439 aa32.12■■■□□ 2.73
MCF2L-201ENST00000261963 CHIC2Q9UKJ5 165 aa32.11■■■□□ 2.73
MCF2L-201ENST00000261963 GCC2Q8IWJ2 1684 aa32.1■■■□□ 2.73
MCF2L-201ENST00000261963 NUP153P49790 1475 aaKnown RBP32.1■■■□□ 2.73
MCF2L-201ENST00000261963 BCL11AQ9H165 835 aa32.07■■■□□ 2.72
MCF2L-201ENST00000261963 MAGI1Q96QZ7 1491 aaPredicted RBP32.06■■■□□ 2.72
MCF2L-201ENST00000261963 DDX10Q13206 875 aaKnown RBP32.05■■■□□ 2.72
MCF2L-201ENST00000261963 RAPGEF6Q8TEU7 1601 aa32.03■■■□□ 2.72
MCF2L-201ENST00000261963 DENND4BO75064 1496 aaPredicted RBP32.03■■■□□ 2.72
MCF2L-201ENST00000261963 KDM6BO15054 1643 aa32.03■■■□□ 2.72
MCF2L-201ENST00000261963 KDM5BQ9UGL1 1544 aa32.01■■■□□ 2.72
MCF2L-201ENST00000261963 HIRIP3Q9BW71 556 aaPredicted RBP32.01■■■□□ 2.71
MCF2L-201ENST00000261963 CEP170Q5SW79 1584 aa32■■■□□ 2.71
MCF2L-201ENST00000261963 SYNJ2O15056 1496 aa32■■■□□ 2.71
MCF2L-201ENST00000261963 KCNH8Q96L42 1107 aa31.98■■■□□ 2.71
MCF2L-201ENST00000261963 CHMP7Q8WUX9 453 aaPredicted RBP31.96■■■□□ 2.71
MCF2L-201ENST00000261963 DAPK1P53355 1430 aa31.93■■■□□ 2.7
MCF2L-201ENST00000261963 TRIM52Q96A61 297 aa31.91■■■□□ 2.7
MCF2L-201ENST00000261963 ABCC5O15440 1437 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 612.9 ms