RNA–Protein interactions for RNA: ENST00000261875.9

HACD3-201, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-201ENST00000261875 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
HACD3-201ENST00000261875 DIEXFQ68CQ4 756 aaKnown RBP19.53■□□□□ 0.72
HACD3-201ENST00000261875 ERCC6Q03468 1493 aa19.52■□□□□ 0.71
HACD3-201ENST00000261875 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
HACD3-201ENST00000261875 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
HACD3-201ENST00000261875 PHLDB1Q86UU1 1377 aa19.46■□□□□ 0.71
HACD3-201ENST00000261875 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
HACD3-201ENST00000261875 PCF11O94913 1555 aaKnown RBP19.45■□□□□ 0.7
HACD3-201ENST00000261875 NEUROD1Q13562 356 aa19.43■□□□□ 0.7
HACD3-201ENST00000261875 MTUS2Q5JR59 1369 aa19.4■□□□□ 0.7
HACD3-201ENST00000261875 FHAD1B1AJZ9 1412 aa19.39■□□□□ 0.69
HACD3-201ENST00000261875 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
HACD3-201ENST00000261875 TIAM1Q13009 1591 aa19.38■□□□□ 0.69
HACD3-201ENST00000261875 MRC2Q9UBG0 1479 aa19.37■□□□□ 0.69
HACD3-201ENST00000261875 CHIC2Q9UKJ5 165 aa19.37■□□□□ 0.69
HACD3-201ENST00000261875 LRRC9Q6ZRR7 1453 aa19.37■□□□□ 0.69
HACD3-201ENST00000261875 DHX57Q6P158 1386 aaKnown RBP19.35■□□□□ 0.69
HACD3-201ENST00000261875 CHMP7Q8WUX9 453 aaPredicted RBP19.34■□□□□ 0.69
HACD3-201ENST00000261875 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.68
HACD3-201ENST00000261875 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
HACD3-201ENST00000261875 CUL7Q14999 1698 aa19.32■□□□□ 0.68
HACD3-201ENST00000261875 SIN3AQ96ST3 1273 aa19.32■□□□□ 0.68
HACD3-201ENST00000261875 RRBP1Q9P2E9 1410 aaKnown RBP19.31■□□□□ 0.68
HACD3-201ENST00000261875 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
HACD3-201ENST00000261875 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
HACD3-201ENST00000261875 CTTNBP2Q8WZ74 1663 aa19.28■□□□□ 0.68
HACD3-201ENST00000261875 RRP7BPQ9NSQ0 103 aa19.26■□□□□ 0.67
HACD3-201ENST00000261875 FMN1Q68DA7 1419 aa19.26■□□□□ 0.67
HACD3-201ENST00000261875 HIRIP3Q9BW71 556 aaPredicted RBP19.25■□□□□ 0.67
HACD3-201ENST00000261875 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
HACD3-201ENST00000261875 CASKIN1Q8WXD9 1431 aa19.24■□□□□ 0.67
HACD3-201ENST00000261875 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
HACD3-201ENST00000261875 MIER1Q8N108 512 aa19.21■□□□□ 0.67
HACD3-201ENST00000261875 FYCO1Q9BQS8 1478 aa19.2■□□□□ 0.66
HACD3-201ENST00000261875 PBRM1Q86U86 1689 aa19.19■□□□□ 0.66
HACD3-201ENST00000261875 EFCAB5A4FU69 1503 aa19.19■□□□□ 0.66
HACD3-201ENST00000261875 ZNF777Q9ULD5 760 aaPredicted RBP19.18■□□□□ 0.66
HACD3-201ENST00000261875 CDK13Q14004 1512 aaKnown RBP19.18■□□□□ 0.66
HACD3-201ENST00000261875 SETD5Q9C0A6 1442 aa19.16■□□□□ 0.66
HACD3-201ENST00000261875 TRIM52Q96A61 297 aa19.15■□□□□ 0.66
HACD3-201ENST00000261875 IFT140Q96RY7 1462 aa19.15■□□□□ 0.66
HACD3-201ENST00000261875 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
HACD3-201ENST00000261875 IQGAP2Q13576 1575 aa19.12■□□□□ 0.65
HACD3-201ENST00000261875 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
HACD3-201ENST00000261875 NCOA2Q15596 1464 aa19.11■□□□□ 0.65
HACD3-201ENST00000261875 CFAP43Q8NDM7 1665 aa19.11■□□□□ 0.65
HACD3-201ENST00000261875 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
HACD3-201ENST00000261875 ZNF644Q9H582 1327 aaPredicted RBP19.1■□□□□ 0.65
HACD3-201ENST00000261875 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.65
HACD3-201ENST00000261875 FOXD1Q16676 465 aa19.08■□□□□ 0.64
HACD3-201ENST00000261875 WDR62O43379 1518 aa19.08■□□□□ 0.64
HACD3-201ENST00000261875 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
HACD3-201ENST00000261875 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
HACD3-201ENST00000261875 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
HACD3-201ENST00000261875 MAGI3Q5TCQ9 1506 aa19.06■□□□□ 0.64
HACD3-201ENST00000261875 JPH4Q96JJ6 628 aa19.06■□□□□ 0.64
HACD3-201ENST00000261875 MAP3K1Q13233 1512 aa19.04■□□□□ 0.64
HACD3-201ENST00000261875 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
HACD3-201ENST00000261875 MYOM3Q5VTT5 1437 aa19.01■□□□□ 0.63
HACD3-201ENST00000261875 EPRSP07814 1512 aaKnown RBP19.01■□□□□ 0.63
HACD3-201ENST00000261875 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
HACD3-201ENST00000261875 PLB1Q6P1J6 1458 aa18.99■□□□□ 0.63
HACD3-201ENST00000261875 MAPKBP1O60336 1514 aa18.98■□□□□ 0.63
HACD3-201ENST00000261875 KIAA0586Q9BVV6 1533 aa18.96■□□□□ 0.63
HACD3-201ENST00000261875 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
HACD3-201ENST00000261875 CLSPNQ9HAW4 1339 aa18.95■□□□□ 0.62
HACD3-201ENST00000261875 ACIN1Q9UKV3 1341 aaKnown RBP18.95■□□□□ 0.62
HACD3-201ENST00000261875 CCDC18Q5T9S5 1454 aa18.95■□□□□ 0.62
HACD3-201ENST00000261875 CENPBP07199 599 aaPredicted RBP18.95■□□□□ 0.62
HACD3-201ENST00000261875 DISP1Q96F81 1524 aa18.94■□□□□ 0.62
HACD3-201ENST00000261875 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
HACD3-201ENST00000261875 CFDP1Q9UEE9 299 aaPredicted RBP18.92■□□□□ 0.62
HACD3-201ENST00000261875 GTF3C3Q9Y5Q9 886 aa18.92■□□□□ 0.62
HACD3-201ENST00000261875 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
HACD3-201ENST00000261875 CDK11AQ9UQ88 783 aaPredicted RBP18.92■□□□□ 0.62
HACD3-201ENST00000261875 HECW1Q76N89 1606 aa18.91■□□□□ 0.62
HACD3-201ENST00000261875 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
HACD3-201ENST00000261875 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
HACD3-201ENST00000261875 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
HACD3-201ENST00000261875 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
HACD3-201ENST00000261875 CNGB1Q14028 1251 aaPredicted RBP18.89■□□□□ 0.61
HACD3-201ENST00000261875 KIAA0556O60303 1618 aa18.88■□□□□ 0.61
HACD3-201ENST00000261875 NUP153P49790 1475 aaKnown RBP18.88■□□□□ 0.61
HACD3-201ENST00000261875 PTPN23Q9H3S7 1636 aa18.88■□□□□ 0.61
HACD3-201ENST00000261875 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
HACD3-201ENST00000261875 NAIPQ13075 1403 aa18.86■□□□□ 0.61
HACD3-201ENST00000261875 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
HACD3-201ENST00000261875 UGGT2Q9NYU1 1516 aa18.85■□□□□ 0.61
HACD3-201ENST00000261875 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
HACD3-201ENST00000261875 PLEKHD1A6NEE1 506 aa18.84■□□□□ 0.61
HACD3-201ENST00000261875 CARMIL2Q6F5E8 1435 aa18.83■□□□□ 0.6
HACD3-201ENST00000261875 HFM1A2PYH4 1435 aa18.8■□□□□ 0.6
HACD3-201ENST00000261875 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
HACD3-201ENST00000261875 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
HACD3-201ENST00000261875 PPP1R15AO75807 674 aaPredicted RBP18.78■□□□□ 0.6
HACD3-201ENST00000261875 KDM6BO15054 1643 aa18.78■□□□□ 0.6
HACD3-201ENST00000261875 HNRNPMP52272 730 aaKnown RBP eCLIP18.78■□□□□ 0.62e-8■■■■□ 26.1
HACD3-201ENST00000261875 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
HACD3-201ENST00000261875 POLR3GLQ9BT43 218 aa18.76■□□□□ 0.59
HACD3-201ENST00000261875 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms