RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
CDH1-201ENST00000261769 CARMIL2Q6F5E8 1435 aa19.11■□□□□ 0.65
CDH1-201ENST00000261769 MYT1Q01538 1121 aa19.11■□□□□ 0.65
CDH1-201ENST00000261769 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
CDH1-201ENST00000261769 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
CDH1-201ENST00000261769 ATAD2BQ9ULI0 1458 aa19.08■□□□□ 0.65
CDH1-201ENST00000261769 KDM2AQ9Y2K7 1162 aa19.08■□□□□ 0.64
CDH1-201ENST00000261769 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
CDH1-201ENST00000261769 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
CDH1-201ENST00000261769 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
CDH1-201ENST00000261769 C14orf37Q86TY3 774 aa19.03■□□□□ 0.64
CDH1-201ENST00000261769 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
CDH1-201ENST00000261769 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
CDH1-201ENST00000261769 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
CDH1-201ENST00000261769 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
CDH1-201ENST00000261769 SMARCA4P51532 1647 aa18.9■□□□□ 0.62
CDH1-201ENST00000261769 KANK1Q14678 1352 aa18.88■□□□□ 0.61
CDH1-201ENST00000261769 WIZO95785 1651 aa18.87■□□□□ 0.61
CDH1-201ENST00000261769 HDGFP51858 240 aaKnown RBP18.87■□□□□ 0.61
CDH1-201ENST00000261769 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
CDH1-201ENST00000261769 EFCAB2Q5VUJ9 269 aa18.86■□□□□ 0.61
CDH1-201ENST00000261769 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDH1-201ENST00000261769 CDCA8Q53HL2 280 aa18.84■□□□□ 0.61
CDH1-201ENST00000261769 FMN1Q68DA7 1419 aa18.83■□□□□ 0.6
CDH1-201ENST00000261769 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
CDH1-201ENST00000261769 TMC1Q8TDI8 760 aa18.82■□□□□ 0.6
CDH1-201ENST00000261769 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
CDH1-201ENST00000261769 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
CDH1-201ENST00000261769 MLECQ14165 292 aa18.82■□□□□ 0.6
CDH1-201ENST00000261769 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
CDH1-201ENST00000261769 HAP1P54257 671 aaPredicted RBP18.81■□□□□ 0.6
CDH1-201ENST00000261769 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
CDH1-201ENST00000261769 BCL11AQ9H165 835 aa18.77■□□□□ 0.6
CDH1-201ENST00000261769 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
CDH1-201ENST00000261769 NCAPD3P42695 1498 aa18.76■□□□□ 0.59
CDH1-201ENST00000261769 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
CDH1-201ENST00000261769 POGKQ9P215 609 aa18.75■□□□□ 0.59
CDH1-201ENST00000261769 GGT6Q6P531 493 aa18.73■□□□□ 0.59
CDH1-201ENST00000261769 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
CDH1-201ENST00000261769 A0A0G2JS52 829 aa18.72■□□□□ 0.59
CDH1-201ENST00000261769 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.58
CDH1-201ENST00000261769 PLEKHG5O94827 1062 aa18.7■□□□□ 0.58
CDH1-201ENST00000261769 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
CDH1-201ENST00000261769 CARD11Q9BXL7 1154 aa18.69■□□□□ 0.58
CDH1-201ENST00000261769 ARHGAP35Q9NRY4 1499 aa18.67■□□□□ 0.58
CDH1-201ENST00000261769 RSPH4AQ5TD94 716 aa18.67■□□□□ 0.58
CDH1-201ENST00000261769 HNRNPUQ00839 825 aaKnown RBP eCLIP18.66■□□□□ 0.58
CDH1-201ENST00000261769 CYB5RLQ6IPT4 315 aa18.66■□□□□ 0.58
CDH1-201ENST00000261769 CFAP53Q96M91 514 aa18.66■□□□□ 0.58
CDH1-201ENST00000261769 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
CDH1-201ENST00000261769 PTPRGP23470 1445 aa18.63■□□□□ 0.57
CDH1-201ENST00000261769 KNSTRNQ9Y448 316 aa18.63■□□□□ 0.57
CDH1-201ENST00000261769 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.62■□□□□ 0.57
CDH1-201ENST00000261769 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
CDH1-201ENST00000261769 SALL2Q9Y467 1007 aaPredicted RBP18.61■□□□□ 0.57
CDH1-201ENST00000261769 ANKRD30AQ9BXX3 1397 aa18.58■□□□□ 0.57
CDH1-201ENST00000261769 SPAG9O60271 1321 aaKnown RBP18.57■□□□□ 0.56
CDH1-201ENST00000261769 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
CDH1-201ENST00000261769 RTL5Q5HYW3 569 aaPredicted RBP18.56■□□□□ 0.56
CDH1-201ENST00000261769 HIRIP3Q9BW71 556 aaPredicted RBP18.56■□□□□ 0.56
CDH1-201ENST00000261769 CCDC18Q5T9S5 1454 aa18.56■□□□□ 0.56
CDH1-201ENST00000261769 FHOD3Q2V2M9 1422 aa18.55■□□□□ 0.56
CDH1-201ENST00000261769 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
CDH1-201ENST00000261769 KIF3BO15066 747 aa18.54■□□□□ 0.56
CDH1-201ENST00000261769 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
CDH1-201ENST00000261769 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.55
CDH1-201ENST00000261769 PKD2Q13563 968 aa18.51■□□□□ 0.55
CDH1-201ENST00000261769 TIMELESSQ9UNS1 1208 aa18.51■□□□□ 0.55
CDH1-201ENST00000261769 NUDCQ9Y266 331 aa18.5■□□□□ 0.55
CDH1-201ENST00000261769 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
CDH1-201ENST00000261769 HNRNPMP52272 730 aaKnown RBP eCLIP18.48■□□□□ 0.55
CDH1-201ENST00000261769 NUP155O75694 1391 aa18.48■□□□□ 0.55
CDH1-201ENST00000261769 TMF1P82094 1093 aa18.48■□□□□ 0.55
CDH1-201ENST00000261769 SIN3AQ96ST3 1273 aa18.48■□□□□ 0.55
CDH1-201ENST00000261769 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
CDH1-201ENST00000261769 WASHC2CQ9Y4E1 1318 aa18.47■□□□□ 0.55
CDH1-201ENST00000261769 EID1Q9Y6B2 187 aa18.46■□□□□ 0.55
CDH1-201ENST00000261769 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.55
CDH1-201ENST00000261769 SRPK2P78362 688 aaKnown RBP18.45■□□□□ 0.54
CDH1-201ENST00000261769 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
CDH1-201ENST00000261769 IGF1RP08069 1367 aa18.42■□□□□ 0.54
CDH1-201ENST00000261769 MYH16Q9H6N6 1097 aa18.42■□□□□ 0.54
CDH1-201ENST00000261769 MAPK8IP3Q9UPT6 1336 aa18.41■□□□□ 0.54
CDH1-201ENST00000261769 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
CDH1-201ENST00000261769 UPF2Q9HAU5 1272 aaKnown RBP18.39■□□□□ 0.54
CDH1-201ENST00000261769 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.53
CDH1-201ENST00000261769 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
CDH1-201ENST00000261769 GRIN2BQ13224 1484 aa18.38■□□□□ 0.53
CDH1-201ENST00000261769 STK26Q9P289 416 aa18.38■□□□□ 0.53
CDH1-201ENST00000261769 FAM69CQ0P6D2 419 aa18.38■□□□□ 0.53
CDH1-201ENST00000261769 CFTRP13569 1480 aa18.38■□□□□ 0.53
CDH1-201ENST00000261769 PNNQ9H307 717 aaKnown RBP18.37■□□□□ 0.53
CDH1-201ENST00000261769 MPHOSPH9Q99550 1183 aa18.37■□□□□ 0.53
CDH1-201ENST00000261769 SAFB2Q14151 953 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDH1-201ENST00000261769 ARXQ96QS3 562 aa18.34■□□□□ 0.53
CDH1-201ENST00000261769 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
CDH1-201ENST00000261769 HDGFL2Q7Z4V5 671 aaPredicted RBP18.34■□□□□ 0.53
CDH1-201ENST00000261769 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
CDH1-201ENST00000261769 FKBP8Q14318 412 aa18.31■□□□□ 0.52
CDH1-201ENST00000261769 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms