RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 PHLDB1Q86UU1 1377 aa18.79■□□□□ 0.6
PGBD1-201ENST00000259883 NEFLP07196 543 aa18.78■□□□□ 0.6
PGBD1-201ENST00000259883 ERICH3Q5RHP9 1530 aa18.76■□□□□ 0.59
PGBD1-201ENST00000259883 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
PGBD1-201ENST00000259883 IGF1RP08069 1367 aa18.74■□□□□ 0.59
PGBD1-201ENST00000259883 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
PGBD1-201ENST00000259883 ANP32CO43423 234 aa18.74■□□□□ 0.59
PGBD1-201ENST00000259883 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
PGBD1-201ENST00000259883 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
PGBD1-201ENST00000259883 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
PGBD1-201ENST00000259883 FHOD3Q2V2M9 1422 aa18.7■□□□□ 0.58
PGBD1-201ENST00000259883 MAPKBP1O60336 1514 aa18.69■□□□□ 0.58
PGBD1-201ENST00000259883 SENP3-EIF4A1A0A087X0R7 540 aa18.66■□□□□ 0.58
PGBD1-201ENST00000259883 TONSLQ96HA7 1378 aa18.64■□□□□ 0.57
PGBD1-201ENST00000259883 HNRNPUQ00839 825 aaKnown RBP eCLIP18.63■□□□□ 0.57
PGBD1-201ENST00000259883 PPP1R15AO75807 674 aaPredicted RBP18.63■□□□□ 0.57
PGBD1-201ENST00000259883 RRP7BPQ9NSQ0 103 aa18.63■□□□□ 0.57
PGBD1-201ENST00000259883 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
PGBD1-201ENST00000259883 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
PGBD1-201ENST00000259883 CFTRP13569 1480 aa18.6■□□□□ 0.57
PGBD1-201ENST00000259883 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
PGBD1-201ENST00000259883 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
PGBD1-201ENST00000259883 TIAM1Q13009 1591 aa18.58■□□□□ 0.57
PGBD1-201ENST00000259883 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
PGBD1-201ENST00000259883 RBM19Q9Y4C8 960 aaKnown RBP18.56■□□□□ 0.56
PGBD1-201ENST00000259883 FOXD1Q16676 465 aa18.56■□□□□ 0.56
PGBD1-201ENST00000259883 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
PGBD1-201ENST00000259883 MTUS2Q5JR59 1369 aa18.54■□□□□ 0.56
PGBD1-201ENST00000259883 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
PGBD1-201ENST00000259883 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
PGBD1-201ENST00000259883 PCF11O94913 1555 aaKnown RBP18.49■□□□□ 0.55
PGBD1-201ENST00000259883 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
PGBD1-201ENST00000259883 TDRD9Q8NDG6 1382 aaKnown RBP18.45■□□□□ 0.54
PGBD1-201ENST00000259883 CCDC184Q52MB2 194 aa18.45■□□□□ 0.54
PGBD1-201ENST00000259883 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
PGBD1-201ENST00000259883 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
PGBD1-201ENST00000259883 ZNF326Q5BKZ1 582 aaKnown RBP18.42■□□□□ 0.54
PGBD1-201ENST00000259883 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
PGBD1-201ENST00000259883 PTPRKQ15262 1439 aa18.41■□□□□ 0.54
PGBD1-201ENST00000259883 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
PGBD1-201ENST00000259883 NESP48681 1621 aa18.39■□□□□ 0.54
PGBD1-201ENST00000259883 ERICH6Q7L0X2 663 aa18.38■□□□□ 0.53
PGBD1-201ENST00000259883 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
PGBD1-201ENST00000259883 FGD6Q6ZV73 1430 aa18.37■□□□□ 0.53
PGBD1-201ENST00000259883 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.53
PGBD1-201ENST00000259883 B4GALNT3Q6L9W6 998 aa18.35■□□□□ 0.53
PGBD1-201ENST00000259883 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
PGBD1-201ENST00000259883 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
PGBD1-201ENST00000259883 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.53
PGBD1-201ENST00000259883 MSH5O43196 834 aa18.33■□□□□ 0.52
PGBD1-201ENST00000259883 MRS2Q9HD23 443 aa18.33■□□□□ 0.52
PGBD1-201ENST00000259883 TIMELESSQ9UNS1 1208 aa18.32■□□□□ 0.52
PGBD1-201ENST00000259883 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
PGBD1-201ENST00000259883 L3MBTL2Q969R5 705 aa18.3■□□□□ 0.52
PGBD1-201ENST00000259883 EIF4G2P78344 907 aaKnown RBP eCLIP18.3■□□□□ 0.52
PGBD1-201ENST00000259883 BCL11AQ9H165 835 aa18.3■□□□□ 0.52
PGBD1-201ENST00000259883 CASKIN1Q8WXD9 1431 aa18.28■□□□□ 0.52
PGBD1-201ENST00000259883 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
PGBD1-201ENST00000259883 MAP3K1Q13233 1512 aa18.25■□□□□ 0.51
PGBD1-201ENST00000259883 FYCO1Q9BQS8 1478 aa18.25■□□□□ 0.51
PGBD1-201ENST00000259883 NAIPQ13075 1403 aa18.25■□□□□ 0.51
PGBD1-201ENST00000259883 UACAQ9BZF9 1416 aa18.24■□□□□ 0.51
PGBD1-201ENST00000259883 NCOA2Q15596 1464 aa18.24■□□□□ 0.51
PGBD1-201ENST00000259883 MPHOSPH9Q99550 1183 aa18.24■□□□□ 0.51
PGBD1-201ENST00000259883 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
PGBD1-201ENST00000259883 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
PGBD1-201ENST00000259883 ZNF644Q9H582 1327 aaPredicted RBP18.21■□□□□ 0.51
PGBD1-201ENST00000259883 CFAP43Q8NDM7 1665 aa18.21■□□□□ 0.5
PGBD1-201ENST00000259883 TOPBP1Q92547 1522 aa18.2■□□□□ 0.5
PGBD1-201ENST00000259883 HFM1A2PYH4 1435 aa18.2■□□□□ 0.5
PGBD1-201ENST00000259883 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
PGBD1-201ENST00000259883 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
PGBD1-201ENST00000259883 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
PGBD1-201ENST00000259883 MYOM3Q5VTT5 1437 aa18.18■□□□□ 0.5
PGBD1-201ENST00000259883 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
PGBD1-201ENST00000259883 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
PGBD1-201ENST00000259883 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
PGBD1-201ENST00000259883 NBR1Q14596 966 aa18.15■□□□□ 0.5
PGBD1-201ENST00000259883 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
PGBD1-201ENST00000259883 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
PGBD1-201ENST00000259883 PPP4R2Q9NY27 417 aa18.11■□□□□ 0.49
PGBD1-201ENST00000259883 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
PGBD1-201ENST00000259883 FBLN2P98095 1184 aa18.09■□□□□ 0.49
PGBD1-201ENST00000259883 EFCAB5A4FU69 1503 aa18.08■□□□□ 0.48
PGBD1-201ENST00000259883 GAPVD1Q14C86 1478 aa18.08■□□□□ 0.48
PGBD1-201ENST00000259883 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.48
PGBD1-201ENST00000259883 CDK13Q14004 1512 aaKnown RBP18.07■□□□□ 0.48
PGBD1-201ENST00000259883 KIF7Q2M1P5 1343 aa18.07■□□□□ 0.48
PGBD1-201ENST00000259883 KDM6BO15054 1643 aa18.06■□□□□ 0.48
PGBD1-201ENST00000259883 CCDC7Q96M83 1385 aa18.06■□□□□ 0.48
PGBD1-201ENST00000259883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
PGBD1-201ENST00000259883 MAGI3Q5TCQ9 1506 aa18.05■□□□□ 0.48
PGBD1-201ENST00000259883 URB2Q14146 1524 aaKnown RBP18.05■□□□□ 0.48
PGBD1-201ENST00000259883 CNTLNQ9NXG0 1405 aa18.04■□□□□ 0.48
PGBD1-201ENST00000259883 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
PGBD1-201ENST00000259883 AKNAQ7Z591 1439 aa18.02■□□□□ 0.48
PGBD1-201ENST00000259883 NPM2Q86SE8 214 aaKnown RBP18.01■□□□□ 0.47
PGBD1-201ENST00000259883 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
PGBD1-201ENST00000259883 KDM5BQ9UGL1 1544 aa18■□□□□ 0.47
PGBD1-201ENST00000259883 CTTNBP2Q8WZ74 1663 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms