RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
PGBD1-201ENST00000259883 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
PGBD1-201ENST00000259883 SUPT5HO00267 1087 aaKnown RBP23.07■■□□□ 1.28
PGBD1-201ENST00000259883 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
PGBD1-201ENST00000259883 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
PGBD1-201ENST00000259883 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
PGBD1-201ENST00000259883 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
PGBD1-201ENST00000259883 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
PGBD1-201ENST00000259883 HRCP23327 699 aa21.9■■□□□ 1.1
PGBD1-201ENST00000259883 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
PGBD1-201ENST00000259883 LOC105371045A0A1W2PR82 267 aa21.85■■□□□ 1.09
PGBD1-201ENST00000259883 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
PGBD1-201ENST00000259883 FAM9AQ8IZU1 332 aaPredicted RBP21.49■■□□□ 1.03
PGBD1-201ENST00000259883 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
PGBD1-201ENST00000259883 TRIM26Q12899 539 aaPredicted RBP21.18■□□□□ 0.98
PGBD1-201ENST00000259883 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
PGBD1-201ENST00000259883 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
PGBD1-201ENST00000259883 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
PGBD1-201ENST00000259883 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
PGBD1-201ENST00000259883 RSF1Q96T23 1441 aaPredicted RBP20.8■□□□□ 0.92
PGBD1-201ENST00000259883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.72■□□□□ 0.91
PGBD1-201ENST00000259883 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
PGBD1-201ENST00000259883 ABCC9O60706 1549 aa20.66■□□□□ 0.9
PGBD1-201ENST00000259883 ZEB1P37275 1124 aaPredicted RBP20.65■□□□□ 0.9
PGBD1-201ENST00000259883 CCER1Q8TC90 406 aaPredicted RBP20.59■□□□□ 0.89
PGBD1-201ENST00000259883 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
PGBD1-201ENST00000259883 CECR2Q9BXF3 1484 aa20.55■□□□□ 0.88
PGBD1-201ENST00000259883 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
PGBD1-201ENST00000259883 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
PGBD1-201ENST00000259883 UBTFP17480 764 aaKnown RBP20.27■□□□□ 0.84
PGBD1-201ENST00000259883 WIZO95785 1651 aa20.27■□□□□ 0.84
PGBD1-201ENST00000259883 NEUROD1Q13562 356 aa20.26■□□□□ 0.83
PGBD1-201ENST00000259883 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
PGBD1-201ENST00000259883 DIEXFQ68CQ4 756 aaKnown RBP20.22■□□□□ 0.83
PGBD1-201ENST00000259883 GTF3C3Q9Y5Q9 886 aa20.14■□□□□ 0.82
PGBD1-201ENST00000259883 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
PGBD1-201ENST00000259883 ABCC8Q09428 1581 aa20.13■□□□□ 0.81
PGBD1-201ENST00000259883 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
PGBD1-201ENST00000259883 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
PGBD1-201ENST00000259883 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
PGBD1-201ENST00000259883 SOGA1O94964 1423 aa20.05■□□□□ 0.8
PGBD1-201ENST00000259883 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
PGBD1-201ENST00000259883 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
PGBD1-201ENST00000259883 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
PGBD1-201ENST00000259883 RUSC2Q8N2Y8 1516 aa19.96■□□□□ 0.79
PGBD1-201ENST00000259883 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
PGBD1-201ENST00000259883 NACADO15069 1562 aa19.94■□□□□ 0.78
PGBD1-201ENST00000259883 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
PGBD1-201ENST00000259883 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
PGBD1-201ENST00000259883 MIER1Q8N108 512 aa19.8■□□□□ 0.76
PGBD1-201ENST00000259883 APLP2Q06481 763 aa19.8■□□□□ 0.76
PGBD1-201ENST00000259883 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
PGBD1-201ENST00000259883 TOP2AP11388 1531 aaKnown RBP19.68■□□□□ 0.74
PGBD1-201ENST00000259883 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
PGBD1-201ENST00000259883 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
PGBD1-201ENST00000259883 ITGAEP38570 1179 aa19.66■□□□□ 0.74
PGBD1-201ENST00000259883 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.74
PGBD1-201ENST00000259883 SMARCA4P51532 1647 aa19.63■□□□□ 0.73
PGBD1-201ENST00000259883 GOLGA3Q08378 1498 aa19.59■□□□□ 0.73
PGBD1-201ENST00000259883 CLIP1P30622 1438 aa19.57■□□□□ 0.72
PGBD1-201ENST00000259883 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
PGBD1-201ENST00000259883 EEA1Q15075 1411 aa19.45■□□□□ 0.7
PGBD1-201ENST00000259883 KANK4Q5T7N3 995 aaPredicted RBP19.41■□□□□ 0.7
PGBD1-201ENST00000259883 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
PGBD1-201ENST00000259883 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
PGBD1-201ENST00000259883 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
PGBD1-201ENST00000259883 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
PGBD1-201ENST00000259883 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
PGBD1-201ENST00000259883 BCANQ96GW7 911 aa19.29■□□□□ 0.68
PGBD1-201ENST00000259883 KCNH8Q96L42 1107 aa19.27■□□□□ 0.68
PGBD1-201ENST00000259883 BAZ1BQ9UIG0 1483 aaKnown RBP19.26■□□□□ 0.67
PGBD1-201ENST00000259883 HIRIP3Q9BW71 556 aaPredicted RBP19.25■□□□□ 0.67
PGBD1-201ENST00000259883 P3H3Q8IVL6 736 aa19.24■□□□□ 0.67
PGBD1-201ENST00000259883 KIF21BO75037 1637 aa19.21■□□□□ 0.67
PGBD1-201ENST00000259883 DHX57Q6P158 1386 aaKnown RBP19.2■□□□□ 0.66
PGBD1-201ENST00000259883 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
PGBD1-201ENST00000259883 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
PGBD1-201ENST00000259883 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
PGBD1-201ENST00000259883 SUPT16HQ9Y5B9 1047 aaKnown RBP19.16■□□□□ 0.66
PGBD1-201ENST00000259883 DDX10Q13206 875 aaKnown RBP19.11■□□□□ 0.65
PGBD1-201ENST00000259883 SIN3AQ96ST3 1273 aa19.11■□□□□ 0.65
PGBD1-201ENST00000259883 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
PGBD1-201ENST00000259883 CCNB3Q8WWL7 1395 aa19■□□□□ 0.63
PGBD1-201ENST00000259883 TRIM52Q96A61 297 aa19■□□□□ 0.63
PGBD1-201ENST00000259883 FKBP8Q14318 412 aa18.97■□□□□ 0.63
PGBD1-201ENST00000259883 RAB3GAP2Q9H2M9 1393 aa18.96■□□□□ 0.63
PGBD1-201ENST00000259883 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
PGBD1-201ENST00000259883 MYT1Q01538 1121 aa18.92■□□□□ 0.62
PGBD1-201ENST00000259883 TSHZ2Q9NRE2 1034 aa18.91■□□□□ 0.62
PGBD1-201ENST00000259883 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
PGBD1-201ENST00000259883 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
PGBD1-201ENST00000259883 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
PGBD1-201ENST00000259883 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.61
PGBD1-201ENST00000259883 CUX1P39880 1505 aa18.87■□□□□ 0.61
PGBD1-201ENST00000259883 ARHGAP35Q9NRY4 1499 aa18.86■□□□□ 0.61
PGBD1-201ENST00000259883 CUX2O14529 1486 aa18.85■□□□□ 0.61
PGBD1-201ENST00000259883 CNGB1Q14028 1251 aaPredicted RBP18.82■□□□□ 0.6
PGBD1-201ENST00000259883 RRBP1Q9P2E9 1410 aaKnown RBP18.82■□□□□ 0.6
PGBD1-201ENST00000259883 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
PGBD1-201ENST00000259883 ARID3CA6NKF2 412 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms