RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 CLSPNQ9HAW4 1339 aa19.79■□□□□ 0.76
LIMD2-201ENST00000259006 ATP1B4Q9UN42 357 aaPredicted RBP19.78■□□□□ 0.76
LIMD2-201ENST00000259006 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
LIMD2-201ENST00000259006 KIF21BO75037 1637 aa19.77■□□□□ 0.75
LIMD2-201ENST00000259006 CFTRP13569 1480 aa19.75■□□□□ 0.75
LIMD2-201ENST00000259006 SLC24A1O60721 1099 aa19.71■□□□□ 0.75
LIMD2-201ENST00000259006 FAM50AQ14320 339 aaKnown RBP19.69■□□□□ 0.74
LIMD2-201ENST00000259006 NEFLP07196 543 aa19.68■□□□□ 0.74
LIMD2-201ENST00000259006 RTN4Q9NQC3 1192 aaKnown RBP19.66■□□□□ 0.74
LIMD2-201ENST00000259006 IRX6P78412 446 aaPredicted RBP19.65■□□□□ 0.74
LIMD2-201ENST00000259006 P3H3Q8IVL6 736 aa19.64■□□□□ 0.73
LIMD2-201ENST00000259006 PLEKHG5O94827 1062 aa19.63■□□□□ 0.73
LIMD2-201ENST00000259006 FANCD2Q9BXW9 1451 aa19.62■□□□□ 0.73
LIMD2-201ENST00000259006 CUX1P39880 1505 aa19.6■□□□□ 0.73
LIMD2-201ENST00000259006 CCNB3Q8WWL7 1395 aa19.59■□□□□ 0.73
LIMD2-201ENST00000259006 RAB3GAP2Q9H2M9 1393 aa19.59■□□□□ 0.73
LIMD2-201ENST00000259006 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
LIMD2-201ENST00000259006 PKNOX2Q96KN3 472 aa19.53■□□□□ 0.72
LIMD2-201ENST00000259006 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
LIMD2-201ENST00000259006 ANP32CO43423 234 aa19.51■□□□□ 0.71
LIMD2-201ENST00000259006 IL27Q8NEV9 243 aa19.49■□□□□ 0.71
LIMD2-201ENST00000259006 CUX2O14529 1486 aa19.47■□□□□ 0.71
LIMD2-201ENST00000259006 ERICH6BQ5W0A0 696 aa19.47■□□□□ 0.71
LIMD2-201ENST00000259006 MYT1LQ9UL68 1186 aa19.47■□□□□ 0.71
LIMD2-201ENST00000259006 NBR1Q14596 966 aa19.47■□□□□ 0.71
LIMD2-201ENST00000259006 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
LIMD2-201ENST00000259006 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
LIMD2-201ENST00000259006 RRBP1Q9P2E9 1410 aaKnown RBP19.44■□□□□ 0.7
LIMD2-201ENST00000259006 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
LIMD2-201ENST00000259006 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
LIMD2-201ENST00000259006 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
LIMD2-201ENST00000259006 PPP1R15AO75807 674 aaPredicted RBP19.42■□□□□ 0.7
LIMD2-201ENST00000259006 HNRNPUQ00839 825 aaKnown RBP eCLIP19.42■□□□□ 0.7
LIMD2-201ENST00000259006 CNGB1Q14028 1251 aaPredicted RBP19.42■□□□□ 0.7
LIMD2-201ENST00000259006 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.7
LIMD2-201ENST00000259006 PRXQ9BXM0 1461 aa19.38■□□□□ 0.69
LIMD2-201ENST00000259006 SETD5Q9C0A6 1442 aa19.37■□□□□ 0.69
LIMD2-201ENST00000259006 MAPKBP1O60336 1514 aa19.37■□□□□ 0.69
LIMD2-201ENST00000259006 BIVM-ERCC5R4GMW8 1640 aa19.36■□□□□ 0.69
LIMD2-201ENST00000259006 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
LIMD2-201ENST00000259006 TOPBP1Q92547 1522 aa19.34■□□□□ 0.69
LIMD2-201ENST00000259006 PODXL2Q9NZ53 605 aa19.34■□□□□ 0.69
LIMD2-201ENST00000259006 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.68
LIMD2-201ENST00000259006 LAMC3Q9Y6N6 1575 aa19.33■□□□□ 0.68
LIMD2-201ENST00000259006 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
LIMD2-201ENST00000259006 URB2Q14146 1524 aaKnown RBP19.32■□□□□ 0.68
LIMD2-201ENST00000259006 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
LIMD2-201ENST00000259006 FANCIQ9NVI1 1328 aa19.31■□□□□ 0.68
LIMD2-201ENST00000259006 POLA1P09884 1462 aaPredicted RBP19.3■□□□□ 0.68
LIMD2-201ENST00000259006 IGF1RP08069 1367 aa19.3■□□□□ 0.68
LIMD2-201ENST00000259006 CDK11AQ9UQ88 783 aaPredicted RBP19.29■□□□□ 0.68
LIMD2-201ENST00000259006 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
LIMD2-201ENST00000259006 TONSLQ96HA7 1378 aa19.26■□□□□ 0.67
LIMD2-201ENST00000259006 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
LIMD2-201ENST00000259006 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
LIMD2-201ENST00000259006 CCER2I3L3R5 266 aa19.24■□□□□ 0.67
LIMD2-201ENST00000259006 DNMBPQ6XZF7 1577 aa19.23■□□□□ 0.67
LIMD2-201ENST00000259006 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
LIMD2-201ENST00000259006 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
LIMD2-201ENST00000259006 DAXXQ9UER7 740 aaPredicted RBP19.21■□□□□ 0.67
LIMD2-201ENST00000259006 B4GALNT3Q6L9W6 998 aa19.2■□□□□ 0.66
LIMD2-201ENST00000259006 FBLN2P98095 1184 aa19.2■□□□□ 0.66
LIMD2-201ENST00000259006 CCDC184Q52MB2 194 aa19.19■□□□□ 0.66
LIMD2-201ENST00000259006 CHIC2Q9UKJ5 165 aa19.18■□□□□ 0.66
LIMD2-201ENST00000259006 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.66
LIMD2-201ENST00000259006 LRRC9Q6ZRR7 1453 aa19.13■□□□□ 0.65
LIMD2-201ENST00000259006 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
LIMD2-201ENST00000259006 POLR3GLQ9BT43 218 aa19.12■□□□□ 0.65
LIMD2-201ENST00000259006 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
LIMD2-201ENST00000259006 TIMELESSQ9UNS1 1208 aa19.12■□□□□ 0.65
LIMD2-201ENST00000259006 ARID3CA6NKF2 412 aa19.12■□□□□ 0.65
LIMD2-201ENST00000259006 FHOD3Q2V2M9 1422 aa19.1■□□□□ 0.65
LIMD2-201ENST00000259006 MRC2Q9UBG0 1479 aa19.1■□□□□ 0.65
LIMD2-201ENST00000259006 TIAM1Q13009 1591 aa19.09■□□□□ 0.65
LIMD2-201ENST00000259006 FOXD1Q16676 465 aa19.08■□□□□ 0.65
LIMD2-201ENST00000259006 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
LIMD2-201ENST00000259006 HSPA5P11021 654 aaKnown RBP19.08■□□□□ 0.64
LIMD2-201ENST00000259006 GAPVD1Q14C86 1478 aa19.07■□□□□ 0.64
LIMD2-201ENST00000259006 PAK3O75914 559 aaPredicted RBP19.06■□□□□ 0.64
LIMD2-201ENST00000259006 NOP58Q9Y2X3 529 aaKnown RBP19.05■□□□□ 0.64
LIMD2-201ENST00000259006 MRS2Q9HD23 443 aa19.04■□□□□ 0.64
LIMD2-201ENST00000259006 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
LIMD2-201ENST00000259006 WASHC2AQ641Q2 1341 aa19.04■□□□□ 0.64
LIMD2-201ENST00000259006 PPP4R2Q9NY27 417 aa19■□□□□ 0.63
LIMD2-201ENST00000259006 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
LIMD2-201ENST00000259006 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
LIMD2-201ENST00000259006 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
LIMD2-201ENST00000259006 CHMP7Q8WUX9 453 aaPredicted RBP18.95■□□□□ 0.62
LIMD2-201ENST00000259006 CCDC18Q5T9S5 1454 aa18.95■□□□□ 0.62
LIMD2-201ENST00000259006 EIF4G2P78344 907 aaKnown RBP eCLIP18.95■□□□□ 0.62
LIMD2-201ENST00000259006 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
LIMD2-201ENST00000259006 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
LIMD2-201ENST00000259006 ZMYND15Q9H091 742 aa18.93■□□□□ 0.62
LIMD2-201ENST00000259006 PCF11O94913 1555 aaKnown RBP18.93■□□□□ 0.62
LIMD2-201ENST00000259006 ZNF326Q5BKZ1 582 aaKnown RBP18.93■□□□□ 0.62
LIMD2-201ENST00000259006 L3MBTL2Q969R5 705 aa18.89■□□□□ 0.61
LIMD2-201ENST00000259006 PRKRIP1Q9H875 184 aaPredicted RBP18.88■□□□□ 0.61
LIMD2-201ENST00000259006 A0A0U1RQG5 324 aaPredicted RBP18.87■□□□□ 0.61
LIMD2-201ENST00000259006 FGD6Q6ZV73 1430 aa18.87■□□□□ 0.61
LIMD2-201ENST00000259006 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms