RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
CDK4-201ENST00000257904 ABCA10Q8WWZ4 1543 aa24.74■■□□□ 1.55
CDK4-201ENST00000257904 IGF1RP08069 1367 aa24.73■■□□□ 1.55
CDK4-201ENST00000257904 ARHGAP35Q9NRY4 1499 aa24.72■■□□□ 1.55
CDK4-201ENST00000257904 CCNB3Q8WWL7 1395 aa24.71■■□□□ 1.55
CDK4-201ENST00000257904 MRC2Q9UBG0 1479 aa24.65■■□□□ 1.54
CDK4-201ENST00000257904 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
CDK4-201ENST00000257904 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
CDK4-201ENST00000257904 MAP3K1Q13233 1512 aa24.55■■□□□ 1.52
CDK4-201ENST00000257904 TIAM1Q13009 1591 aa24.53■■□□□ 1.52
CDK4-201ENST00000257904 TARBP1Q13395 1621 aaKnown RBP24.53■■□□□ 1.52
CDK4-201ENST00000257904 RAB3GAP2Q9H2M9 1393 aa24.52■■□□□ 1.52
CDK4-201ENST00000257904 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
CDK4-201ENST00000257904 TDRD9Q8NDG6 1382 aaKnown RBP24.51■■□□□ 1.51
CDK4-201ENST00000257904 WDR62O43379 1518 aa24.51■■□□□ 1.51
CDK4-201ENST00000257904 MAPKBP1O60336 1514 aa24.51■■□□□ 1.51
CDK4-201ENST00000257904 SUPT16HQ9Y5B9 1047 aaKnown RBP24.5■■□□□ 1.51
CDK4-201ENST00000257904 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
CDK4-201ENST00000257904 ITGAEP38570 1179 aa24.5■■□□□ 1.51
CDK4-201ENST00000257904 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
CDK4-201ENST00000257904 CUL7Q14999 1698 aa24.45■■□□□ 1.5
CDK4-201ENST00000257904 LRRC9Q6ZRR7 1453 aa24.43■■□□□ 1.5
CDK4-201ENST00000257904 SETD5Q9C0A6 1442 aa24.41■■□□□ 1.5
CDK4-201ENST00000257904 THOC2Q8NI27 1593 aaKnown RBP24.4■■□□□ 1.5
CDK4-201ENST00000257904 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
CDK4-201ENST00000257904 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
CDK4-201ENST00000257904 CFAP43Q8NDM7 1665 aa24.34■■□□□ 1.49
CDK4-201ENST00000257904 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
CDK4-201ENST00000257904 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.489e-10■■■■■ 41.2
CDK4-201ENST00000257904 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
CDK4-201ENST00000257904 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
CDK4-201ENST00000257904 ZNF608Q9ULD9 1512 aaPredicted RBP24.27■■□□□ 1.48
CDK4-201ENST00000257904 KCNH8Q96L42 1107 aa24.27■■□□□ 1.48
CDK4-201ENST00000257904 CTTNBP2Q8WZ74 1663 aa24.26■■□□□ 1.47
CDK4-201ENST00000257904 FAM50AQ14320 339 aaKnown RBP24.25■■□□□ 1.47
CDK4-201ENST00000257904 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
CDK4-201ENST00000257904 P3H3Q8IVL6 736 aa24.22■■□□□ 1.47
CDK4-201ENST00000257904 SIN3AQ96ST3 1273 aa24.22■■□□□ 1.47
CDK4-201ENST00000257904 TIMELESSQ9UNS1 1208 aa24.21■■□□□ 1.47
CDK4-201ENST00000257904 FYCO1Q9BQS8 1478 aa24.18■■□□□ 1.46
CDK4-201ENST00000257904 TSHZ2Q9NRE2 1034 aa24.17■■□□□ 1.46
CDK4-201ENST00000257904 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
CDK4-201ENST00000257904 DDX10Q13206 875 aaKnown RBP24.17■■□□□ 1.46
CDK4-201ENST00000257904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.16■■□□□ 1.468e-9■■■□□ 17.4
CDK4-201ENST00000257904 EIF4G3O43432 1585 aaKnown RBP24.15■■□□□ 1.46
CDK4-201ENST00000257904 EFCAB5A4FU69 1503 aa24.15■■□□□ 1.46
CDK4-201ENST00000257904 FHOD3Q2V2M9 1422 aa24.14■■□□□ 1.46
CDK4-201ENST00000257904 PPP1R15AO75807 674 aaPredicted RBP24.14■■□□□ 1.45
CDK4-201ENST00000257904 CASKIN1Q8WXD9 1431 aa24.12■■□□□ 1.45
CDK4-201ENST00000257904 ATP1B4Q9UN42 357 aaPredicted RBP24.09■■□□□ 1.45
CDK4-201ENST00000257904 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
CDK4-201ENST00000257904 CCER2I3L3R5 266 aa24.03■■□□□ 1.44
CDK4-201ENST00000257904 FGD6Q6ZV73 1430 aa24.02■■□□□ 1.44
CDK4-201ENST00000257904 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
CDK4-201ENST00000257904 SAMD9Q5K651 1589 aa24.01■■□□□ 1.43
CDK4-201ENST00000257904 FKBP8Q14318 412 aa23.99■■□□□ 1.43
CDK4-201ENST00000257904 FMN1Q68DA7 1419 aa23.99■■□□□ 1.43
CDK4-201ENST00000257904 CCDC18Q5T9S5 1454 aa23.97■■□□□ 1.43
CDK4-201ENST00000257904 HIRIP3Q9BW71 556 aaPredicted RBP23.97■■□□□ 1.43
CDK4-201ENST00000257904 ANP32CO43423 234 aa23.96■■□□□ 1.43
CDK4-201ENST00000257904 BCANQ96GW7 911 aa23.96■■□□□ 1.43
CDK4-201ENST00000257904 GRIN2AQ12879 1464 aa23.95■■□□□ 1.43
CDK4-201ENST00000257904 HFM1A2PYH4 1435 aa23.95■■□□□ 1.42
CDK4-201ENST00000257904 TONSLQ96HA7 1378 aa23.95■■□□□ 1.42
CDK4-201ENST00000257904 IQGAP2Q13576 1575 aa23.95■■□□□ 1.42
CDK4-201ENST00000257904 UACAQ9BZF9 1416 aa23.93■■□□□ 1.42
CDK4-201ENST00000257904 SYNJ2O15056 1496 aa23.93■■□□□ 1.42
CDK4-201ENST00000257904 PTPN23Q9H3S7 1636 aa23.92■■□□□ 1.42
CDK4-201ENST00000257904 PTPRKQ15262 1439 aa23.9■■□□□ 1.42
CDK4-201ENST00000257904 MTUS2Q5JR59 1369 aa23.9■■□□□ 1.42
CDK4-201ENST00000257904 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
CDK4-201ENST00000257904 KIAA0586Q9BVV6 1533 aa23.88■■□□□ 1.41
CDK4-201ENST00000257904 NEFLP07196 543 aa23.88■■□□□ 1.41
CDK4-201ENST00000257904 ANP32EQ9BTT0 268 aa23.87■■□□□ 1.41
CDK4-201ENST00000257904 TRIM52Q96A61 297 aa23.86■■□□□ 1.41
CDK4-201ENST00000257904 NAIPQ13075 1403 aa23.84■■□□□ 1.41
CDK4-201ENST00000257904 LRRIQ1Q96JM4 1722 aa23.84■■□□□ 1.41
CDK4-201ENST00000257904 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
CDK4-201ENST00000257904 MYOM3Q5VTT5 1437 aa23.83■■□□□ 1.41
CDK4-201ENST00000257904 NCOA2Q15596 1464 aa23.83■■□□□ 1.41
CDK4-201ENST00000257904 FBLN2P98095 1184 aa23.82■■□□□ 1.4
CDK4-201ENST00000257904 CEP170Q5SW79 1584 aa23.8■■□□□ 1.4
CDK4-201ENST00000257904 KDM5BQ9UGL1 1544 aa23.8■■□□□ 1.4
CDK4-201ENST00000257904 SUPT6HQ7KZ85 1726 aaKnown RBP23.79■■□□□ 1.4
CDK4-201ENST00000257904 EHBP1L1Q8N3D4 1523 aa23.78■■□□□ 1.4
CDK4-201ENST00000257904 NUP160Q12769 1436 aa23.77■■□□□ 1.4
CDK4-201ENST00000257904 DISP1Q96F81 1524 aa23.73■■□□□ 1.39
CDK4-201ENST00000257904 ARHGEF11O15085 1522 aa23.72■■□□□ 1.39
CDK4-201ENST00000257904 KIAA0556O60303 1618 aa23.7■■□□□ 1.38
CDK4-201ENST00000257904 RBM19Q9Y4C8 960 aaKnown RBP23.68■■□□□ 1.38
CDK4-201ENST00000257904 HECW1Q76N89 1606 aa23.67■■□□□ 1.38
CDK4-201ENST00000257904 MAGI3Q5TCQ9 1506 aa23.66■■□□□ 1.38
CDK4-201ENST00000257904 GCC2Q8IWJ2 1684 aa23.66■■□□□ 1.38
CDK4-201ENST00000257904 TCOF1Q13428 1488 aaKnown RBP23.66■■□□□ 1.38
CDK4-201ENST00000257904 JPH4Q96JJ6 628 aa23.64■■□□□ 1.37
CDK4-201ENST00000257904 DENND4BO75064 1496 aaPredicted RBP23.63■■□□□ 1.37
CDK4-201ENST00000257904 AKNAQ7Z591 1439 aa23.62■■□□□ 1.37
CDK4-201ENST00000257904 WASHC2AQ641Q2 1341 aa23.61■■□□□ 1.37
CDK4-201ENST00000257904 EPRSP07814 1512 aaKnown RBP23.61■■□□□ 1.37
CDK4-201ENST00000257904 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms