RNA–Protein interactions for RNA: ENST00000252244.3

KRT1-201, Transcript of keratin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT1, Length 2,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1-201ENST00000252244 FHAD1B1AJZ9 1412 aa29.15■■■□□ 2.26
KRT1-201ENST00000252244 FHOD3Q2V2M9 1422 aa29.13■■■□□ 2.25
KRT1-201ENST00000252244 CTTNBP2Q8WZ74 1663 aa29.13■■■□□ 2.25
KRT1-201ENST00000252244 PCF11O94913 1555 aaKnown RBP29.13■■■□□ 2.25
KRT1-201ENST00000252244 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
KRT1-201ENST00000252244 ZNF316A6NFI3 1004 aaPredicted RBP29.12■■■□□ 2.25
KRT1-201ENST00000252244 LRRC9Q6ZRR7 1453 aa29.1■■■□□ 2.25
KRT1-201ENST00000252244 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
KRT1-201ENST00000252244 DHX57Q6P158 1386 aaKnown RBP29.08■■■□□ 2.25
KRT1-201ENST00000252244 ATP1B4Q9UN42 357 aaPredicted RBP29.08■■■□□ 2.25
KRT1-201ENST00000252244 EFCAB5A4FU69 1503 aa29.07■■■□□ 2.24
KRT1-201ENST00000252244 ITGAEP38570 1179 aa29.07■■■□□ 2.24
KRT1-201ENST00000252244 CFAP43Q8NDM7 1665 aa29.04■■■□□ 2.24
KRT1-201ENST00000252244 PHLDB1Q86UU1 1377 aa28.99■■■□□ 2.23
KRT1-201ENST00000252244 CLSPNQ9HAW4 1339 aa28.98■■■□□ 2.23
KRT1-201ENST00000252244 FYCO1Q9BQS8 1478 aa28.98■■■□□ 2.23
KRT1-201ENST00000252244 TARBP1Q13395 1621 aaKnown RBP28.97■■■□□ 2.23
KRT1-201ENST00000252244 CASKIN1Q8WXD9 1431 aa28.95■■■□□ 2.23
KRT1-201ENST00000252244 AQRO60306 1485 aaKnown RBP eCLIP28.92■■■□□ 2.22
KRT1-201ENST00000252244 FMN1Q68DA7 1419 aa28.89■■■□□ 2.21
KRT1-201ENST00000252244 FAM50AQ14320 339 aaKnown RBP28.86■■■□□ 2.21
KRT1-201ENST00000252244 SAMD9Q5K651 1589 aa28.86■■■□□ 2.21
KRT1-201ENST00000252244 RAB3GAP2Q9H2M9 1393 aa28.84■■■□□ 2.21
KRT1-201ENST00000252244 SNAPC4Q5SXM2 1469 aa28.84■■■□□ 2.21
KRT1-201ENST00000252244 MRC2Q9UBG0 1479 aa28.82■■■□□ 2.2
KRT1-201ENST00000252244 PBRM1Q86U86 1689 aa28.82■■■□□ 2.2
KRT1-201ENST00000252244 SCAF1Q9H7N4 1312 aaKnown RBP28.77■■■□□ 2.2
KRT1-201ENST00000252244 SETD5Q9C0A6 1442 aa28.75■■■□□ 2.19
KRT1-201ENST00000252244 LRRIQ1Q96JM4 1722 aa28.74■■■□□ 2.19
KRT1-201ENST00000252244 MTUS2Q5JR59 1369 aa28.69■■■□□ 2.18
KRT1-201ENST00000252244 GRIN2BQ13224 1484 aa28.69■■■□□ 2.18
KRT1-201ENST00000252244 ADAMTS12P58397 1594 aa28.69■■■□□ 2.18
KRT1-201ENST00000252244 NEUROD1Q13562 356 aa28.67■■■□□ 2.18
KRT1-201ENST00000252244 ACIN1Q9UKV3 1341 aaKnown RBP28.67■■■□□ 2.18
KRT1-201ENST00000252244 MAPKBP1O60336 1514 aa28.66■■■□□ 2.18
KRT1-201ENST00000252244 MIER1Q8N108 512 aa28.64■■■□□ 2.17
KRT1-201ENST00000252244 ZNF608Q9ULD9 1512 aaPredicted RBP28.63■■■□□ 2.17
KRT1-201ENST00000252244 FGD6Q6ZV73 1430 aa28.63■■■□□ 2.17
KRT1-201ENST00000252244 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
KRT1-201ENST00000252244 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.61■■■□□ 2.17
KRT1-201ENST00000252244 THOC2Q8NI27 1593 aaKnown RBP28.6■■■□□ 2.17
KRT1-201ENST00000252244 WDR62O43379 1518 aa28.6■■■□□ 2.17
KRT1-201ENST00000252244 IFT140Q96RY7 1462 aa28.6■■■□□ 2.17
KRT1-201ENST00000252244 CENPBP07199 599 aaPredicted RBP28.58■■■□□ 2.17
KRT1-201ENST00000252244 NCOA2Q15596 1464 aa28.55■■■□□ 2.16
KRT1-201ENST00000252244 SUPT6HQ7KZ85 1726 aaKnown RBP28.52■■■□□ 2.16
KRT1-201ENST00000252244 EHBP1L1Q8N3D4 1523 aa28.51■■■□□ 2.15
KRT1-201ENST00000252244 MAGI3Q5TCQ9 1506 aa28.5■■■□□ 2.15
KRT1-201ENST00000252244 MYOM3Q5VTT5 1437 aa28.49■■■□□ 2.15
KRT1-201ENST00000252244 CCDC18Q5T9S5 1454 aa28.47■■■□□ 2.15
KRT1-201ENST00000252244 YTHDC1Q96MU7 727 aaKnown RBP28.47■■■□□ 2.15
KRT1-201ENST00000252244 HECW1Q76N89 1606 aa28.46■■■□□ 2.15
KRT1-201ENST00000252244 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
KRT1-201ENST00000252244 PTPRKQ15262 1439 aa28.46■■■□□ 2.15
KRT1-201ENST00000252244 SIN3AQ96ST3 1273 aa28.46■■■□□ 2.15
KRT1-201ENST00000252244 EIF4G3O43432 1585 aaKnown RBP28.43■■■□□ 2.14
KRT1-201ENST00000252244 UGGT2Q9NYU1 1516 aa28.43■■■□□ 2.14
KRT1-201ENST00000252244 EPRSP07814 1512 aaKnown RBP28.41■■■□□ 2.14
KRT1-201ENST00000252244 ARHGEF11O15085 1522 aa28.4■■■□□ 2.14
KRT1-201ENST00000252244 ARID3CA6NKF2 412 aa28.39■■■□□ 2.14
KRT1-201ENST00000252244 CDK13Q14004 1512 aaKnown RBP28.39■■■□□ 2.13
KRT1-201ENST00000252244 PTPN23Q9H3S7 1636 aa28.38■■■□□ 2.13
KRT1-201ENST00000252244 KIAA0586Q9BVV6 1533 aa28.37■■■□□ 2.13
KRT1-201ENST00000252244 HFM1A2PYH4 1435 aa28.36■■■□□ 2.13
KRT1-201ENST00000252244 GRIN2AQ12879 1464 aa28.35■■■□□ 2.13
KRT1-201ENST00000252244 DISP1Q96F81 1524 aa28.32■■■□□ 2.12
KRT1-201ENST00000252244 GTF3C3Q9Y5Q9 886 aa28.32■■■□□ 2.12
KRT1-201ENST00000252244 KIAA0556O60303 1618 aa28.31■■■□□ 2.12
KRT1-201ENST00000252244 NAIPQ13075 1403 aa28.3■■■□□ 2.12
KRT1-201ENST00000252244 UACAQ9BZF9 1416 aa28.25■■■□□ 2.11
KRT1-201ENST00000252244 TCOF1Q13428 1488 aaKnown RBP28.24■■■□□ 2.11
KRT1-201ENST00000252244 MAGI1Q96QZ7 1491 aaPredicted RBP28.23■■■□□ 2.11
KRT1-201ENST00000252244 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
KRT1-201ENST00000252244 CHIC2Q9UKJ5 165 aa28.21■■■□□ 2.11
KRT1-201ENST00000252244 TIMELESSQ9UNS1 1208 aa28.21■■■□□ 2.11
KRT1-201ENST00000252244 RRP7BPQ9NSQ0 103 aa28.19■■■□□ 2.1
KRT1-201ENST00000252244 FBLN2P98095 1184 aa28.19■■■□□ 2.1
KRT1-201ENST00000252244 NUP153P49790 1475 aaKnown RBP28.18■■■□□ 2.1
KRT1-201ENST00000252244 SYNJ2O15056 1496 aa28.18■■■□□ 2.1
KRT1-201ENST00000252244 CEP170Q5SW79 1584 aa28.18■■■□□ 2.1
KRT1-201ENST00000252244 RAPGEF6Q8TEU7 1601 aa28.17■■■□□ 2.1
KRT1-201ENST00000252244 MIA2Q96PC5 1412 aa28.16■■■□□ 2.1
KRT1-201ENST00000252244 PPP1R15AO75807 674 aaPredicted RBP28.15■■■□□ 2.1
KRT1-201ENST00000252244 GCC2Q8IWJ2 1684 aa28.11■■■□□ 2.09
KRT1-201ENST00000252244 TONSLQ96HA7 1378 aa28.09■■■□□ 2.09
KRT1-201ENST00000252244 KDM6BO15054 1643 aa28.06■■■□□ 2.08
KRT1-201ENST00000252244 AKNAQ7Z591 1439 aa28.04■■■□□ 2.08
KRT1-201ENST00000252244 PLB1Q6P1J6 1458 aa28.04■■■□□ 2.08
KRT1-201ENST00000252244 CDK11AQ9UQ88 783 aaPredicted RBP28.03■■■□□ 2.08
KRT1-201ENST00000252244 NUP160Q12769 1436 aa28.03■■■□□ 2.08
KRT1-201ENST00000252244 HIRIP3Q9BW71 556 aaPredicted RBP28.02■■■□□ 2.08
KRT1-201ENST00000252244 TRIM52Q96A61 297 aa28.01■■■□□ 2.08
KRT1-201ENST00000252244 JPH4Q96JJ6 628 aa28.01■■■□□ 2.08
KRT1-201ENST00000252244 ZNF644Q9H582 1327 aaPredicted RBP28■■■□□ 2.07
KRT1-201ENST00000252244 PRG4Q92954 1404 aaPredicted RBP27.99■■■□□ 2.07
KRT1-201ENST00000252244 DDX10Q13206 875 aaKnown RBP27.98■■■□□ 2.07
KRT1-201ENST00000252244 DAPK1P53355 1430 aa27.98■■■□□ 2.07
KRT1-201ENST00000252244 CARMIL2Q6F5E8 1435 aa27.98■■■□□ 2.07
KRT1-201ENST00000252244 DENND4BO75064 1496 aaPredicted RBP27.97■■■□□ 2.07
KRT1-201ENST00000252244 TROQ12816 1431 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms