RNA–Protein interactions for RNA: ENST00000251849.8

RAF1-201, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAF1, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-201ENST00000251849 KIF21BO75037 1637 aa20.31■□□□□ 0.84
RAF1-201ENST00000251849 PPP1R15AO75807 674 aaPredicted RBP20.3■□□□□ 0.84
RAF1-201ENST00000251849 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
RAF1-201ENST00000251849 PAK3O75914 559 aaPredicted RBP20.29■□□□□ 0.84
RAF1-201ENST00000251849 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
RAF1-201ENST00000251849 WDR97A6NE52 1622 aa20.26■□□□□ 0.83
RAF1-201ENST00000251849 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.24■□□□□ 0.83
RAF1-201ENST00000251849 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
RAF1-201ENST00000251849 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
RAF1-201ENST00000251849 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
RAF1-201ENST00000251849 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
RAF1-201ENST00000251849 SALL2Q9Y467 1007 aaPredicted RBP20.2■□□□□ 0.82
RAF1-201ENST00000251849 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
RAF1-201ENST00000251849 IL27Q8NEV9 243 aa20.14■□□□□ 0.82
RAF1-201ENST00000251849 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
RAF1-201ENST00000251849 NOP58Q9Y2X3 529 aaKnown RBP20.12■□□□□ 0.81
RAF1-201ENST00000251849 CCER2I3L3R5 266 aa20.12■□□□□ 0.81
RAF1-201ENST00000251849 RTL5Q5HYW3 569 aaPredicted RBP20.1■□□□□ 0.81
RAF1-201ENST00000251849 TONSLQ96HA7 1378 aa20.1■□□□□ 0.81
RAF1-201ENST00000251849 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
RAF1-201ENST00000251849 PPP4R2Q9NY27 417 aa20.07■□□□□ 0.8
RAF1-201ENST00000251849 LAS1LQ9Y4W2 734 aaKnown RBP20.07■□□□□ 0.8
RAF1-201ENST00000251849 MAPKBP1O60336 1514 aa20.07■□□□□ 0.8
RAF1-201ENST00000251849 MRS2Q9HD23 443 aa20.05■□□□□ 0.8
RAF1-201ENST00000251849 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
RAF1-201ENST00000251849 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
RAF1-201ENST00000251849 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
RAF1-201ENST00000251849 PHLDB1Q86UU1 1377 aa19.97■□□□□ 0.79
RAF1-201ENST00000251849 ANP32AP39687 249 aaKnown RBP19.96■□□□□ 0.79
RAF1-201ENST00000251849 ZBTB47Q9UFB7 747 aaPredicted RBP19.96■□□□□ 0.79
RAF1-201ENST00000251849 FOXD1Q16676 465 aa19.96■□□□□ 0.79
RAF1-201ENST00000251849 HSPA5P11021 654 aaKnown RBP19.95■□□□□ 0.78
RAF1-201ENST00000251849 EIF5BO60841 1220 aaKnown RBP19.94■□□□□ 0.78
RAF1-201ENST00000251849 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
RAF1-201ENST00000251849 RRP7BPQ9NSQ0 103 aa19.91■□□□□ 0.78
RAF1-201ENST00000251849 ZNF326Q5BKZ1 582 aaKnown RBP19.89■□□□□ 0.78
RAF1-201ENST00000251849 WASHC2AQ641Q2 1341 aa19.89■□□□□ 0.77
RAF1-201ENST00000251849 SKAP1Q86WV1 359 aa19.85■□□□□ 0.77
RAF1-201ENST00000251849 C11orf95C9JLR9 678 aaPredicted RBP19.85■□□□□ 0.77
RAF1-201ENST00000251849 ARHGAP35Q9NRY4 1499 aa19.84■□□□□ 0.77
RAF1-201ENST00000251849 AKNAQ7Z591 1439 aa19.84■□□□□ 0.77
RAF1-201ENST00000251849 NEFMP07197 916 aa19.84■□□□□ 0.77
RAF1-201ENST00000251849 IPO9Q96P70 1041 aaKnown RBP19.8■□□□□ 0.76
RAF1-201ENST00000251849 MYT1LQ9UL68 1186 aa19.79■□□□□ 0.76
RAF1-201ENST00000251849 SLC4A3P48751 1232 aa19.77■□□□□ 0.75
RAF1-201ENST00000251849 EIF4G2P78344 907 aaKnown RBP eCLIP19.76■□□□□ 0.75
RAF1-201ENST00000251849 PRKRIP1Q9H875 184 aaPredicted RBP19.75■□□□□ 0.75
RAF1-201ENST00000251849 BRPF3Q9ULD4 1205 aa19.74■□□□□ 0.75
RAF1-201ENST00000251849 PRXQ9BXM0 1461 aa19.74■□□□□ 0.75
RAF1-201ENST00000251849 CUX2O14529 1486 aa19.73■□□□□ 0.75
RAF1-201ENST00000251849 KIF27Q86VH2 1401 aa19.71■□□□□ 0.75
RAF1-201ENST00000251849 UNC13AQ9UPW8 1703 aa19.7■□□□□ 0.74
RAF1-201ENST00000251849 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
RAF1-201ENST00000251849 ARXQ96QS3 562 aa19.66■□□□□ 0.74
RAF1-201ENST00000251849 FHOD3Q2V2M9 1422 aa19.66■□□□□ 0.74
RAF1-201ENST00000251849 LRRC9Q6ZRR7 1453 aa19.65■□□□□ 0.74
RAF1-201ENST00000251849 TIMELESSQ9UNS1 1208 aa19.65■□□□□ 0.74
RAF1-201ENST00000251849 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
RAF1-201ENST00000251849 ZBED9Q6R2W3 1325 aa19.62■□□□□ 0.73
RAF1-201ENST00000251849 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
RAF1-201ENST00000251849 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.735e-8■■■■■ 32.4
RAF1-201ENST00000251849 CCDC18Q5T9S5 1454 aa19.59■□□□□ 0.73
RAF1-201ENST00000251849 PLIN1O60240 522 aa19.59■□□□□ 0.73
RAF1-201ENST00000251849 ATAD2BQ9ULI0 1458 aa19.59■□□□□ 0.73
RAF1-201ENST00000251849 ERICH6BQ5W0A0 696 aa19.58■□□□□ 0.72
RAF1-201ENST00000251849 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
RAF1-201ENST00000251849 TIAM1Q13009 1591 aa19.57■□□□□ 0.72
RAF1-201ENST00000251849 TMC1Q8TDI8 760 aa19.57■□□□□ 0.72
RAF1-201ENST00000251849 NBPF8Q3BBV2 869 aa19.55■□□□□ 0.72
RAF1-201ENST00000251849 NUDCQ9Y266 331 aa19.55■□□□□ 0.72
RAF1-201ENST00000251849 TOP2BQ02880 1626 aa19.55■□□□□ 0.72
RAF1-201ENST00000251849 PTPRKQ15262 1439 aa19.55■□□□□ 0.72
RAF1-201ENST00000251849 CARMIL1Q5VZK9 1371 aa19.55■□□□□ 0.72
RAF1-201ENST00000251849 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
RAF1-201ENST00000251849 PDE4AP27815 886 aa19.53■□□□□ 0.72
RAF1-201ENST00000251849 KIF7Q2M1P5 1343 aa19.52■□□□□ 0.72
RAF1-201ENST00000251849 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
RAF1-201ENST00000251849 DAXXQ9UER7 740 aaPredicted RBP19.51■□□□□ 0.71
RAF1-201ENST00000251849 IGF1RP08069 1367 aa19.5■□□□□ 0.71
RAF1-201ENST00000251849 CCDC7Q96M83 1385 aa19.5■□□□□ 0.71
RAF1-201ENST00000251849 CUX1P39880 1505 aa19.5■□□□□ 0.71
RAF1-201ENST00000251849 MPHOSPH9Q99550 1183 aa19.46■□□□□ 0.71
RAF1-201ENST00000251849 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
RAF1-201ENST00000251849 KDM2AQ9Y2K7 1162 aa19.45■□□□□ 0.7
RAF1-201ENST00000251849 FRAT1Q92837 279 aaPredicted RBP19.43■□□□□ 0.7
RAF1-201ENST00000251849 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
RAF1-201ENST00000251849 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
RAF1-201ENST00000251849 FGD6Q6ZV73 1430 aa19.41■□□□□ 0.7
RAF1-201ENST00000251849 SLC4A1APQ9BWU0 796 aaKnown RBP19.4■□□□□ 0.7
RAF1-201ENST00000251849 PCF11O94913 1555 aaKnown RBP19.39■□□□□ 0.69
RAF1-201ENST00000251849 RGS3P49796 1198 aa19.38■□□□□ 0.69
RAF1-201ENST00000251849 NFKBIBQ15653 356 aa19.38■□□□□ 0.69
RAF1-201ENST00000251849 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
RAF1-201ENST00000251849 GSE1Q14687 1217 aa19.37■□□□□ 0.69
RAF1-201ENST00000251849 RRP1P56182 461 aaKnown RBP19.36■□□□□ 0.69
RAF1-201ENST00000251849 RCAN3Q9UKA8 241 aa19.36■□□□□ 0.69
RAF1-201ENST00000251849 NAIPQ13075 1403 aa19.36■□□□□ 0.69
RAF1-201ENST00000251849 UBE2Q2Q8WVN8 375 aa19.35■□□□□ 0.69
RAF1-201ENST00000251849 BACH2Q9BYV9 841 aa19.34■□□□□ 0.69
RAF1-201ENST00000251849 FRAT2O75474 233 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms