RNA–Protein interactions for RNA: ENST00000251849.8

RAF1-201, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAF1, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-201ENST00000251849 NISCHQ9Y2I1 1504 aa26.68■■□□□ 1.86
RAF1-201ENST00000251849 SHROOM4Q9ULL8 1493 aa24.98■■□□□ 1.59
RAF1-201ENST00000251849 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
RAF1-201ENST00000251849 PPARGC1BQ86YN6 1023 aaKnown RBP24.71■■□□□ 1.55
RAF1-201ENST00000251849 PCGF6Q9BYE7 350 aa24.61■■□□□ 1.53
RAF1-201ENST00000251849 HRCP23327 699 aa24.54■■□□□ 1.52
RAF1-201ENST00000251849 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
RAF1-201ENST00000251849 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
RAF1-201ENST00000251849 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
RAF1-201ENST00000251849 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
RAF1-201ENST00000251849 EHMT2Q96KQ7 1210 aa23.66■■□□□ 1.38
RAF1-201ENST00000251849 SCAF1Q9H7N4 1312 aaKnown RBP23.46■■□□□ 1.35
RAF1-201ENST00000251849 PELP1Q8IZL8 1130 aaKnown RBP23.28■■□□□ 1.32
RAF1-201ENST00000251849 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
RAF1-201ENST00000251849 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
RAF1-201ENST00000251849 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
RAF1-201ENST00000251849 NEUROD1Q13562 356 aa22.89■■□□□ 1.26
RAF1-201ENST00000251849 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.25
RAF1-201ENST00000251849 GTF3C3Q9Y5Q9 886 aa22.84■■□□□ 1.25
RAF1-201ENST00000251849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.84■■□□□ 1.25
RAF1-201ENST00000251849 ZEB1P37275 1124 aaPredicted RBP22.81■■□□□ 1.24
RAF1-201ENST00000251849 YTHDC1Q96MU7 727 aaKnown RBP22.75■■□□□ 1.23
RAF1-201ENST00000251849 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
RAF1-201ENST00000251849 CCER1Q8TC90 406 aaPredicted RBP22.68■■□□□ 1.22
RAF1-201ENST00000251849 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
RAF1-201ENST00000251849 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
RAF1-201ENST00000251849 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
RAF1-201ENST00000251849 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
RAF1-201ENST00000251849 CENPBP07199 599 aaPredicted RBP22.46■■□□□ 1.19
RAF1-201ENST00000251849 MYT1Q01538 1121 aa22.28■■□□□ 1.16
RAF1-201ENST00000251849 MIER1Q8N108 512 aa22.01■■□□□ 1.11
RAF1-201ENST00000251849 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
RAF1-201ENST00000251849 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.1
RAF1-201ENST00000251849 RANGAP1P46060 587 aaPredicted RBP21.86■■□□□ 1.09
RAF1-201ENST00000251849 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
RAF1-201ENST00000251849 BCANQ96GW7 911 aa21.72■■□□□ 1.07
RAF1-201ENST00000251849 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
RAF1-201ENST00000251849 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
RAF1-201ENST00000251849 BCL11AQ9H165 835 aa21.58■■□□□ 1.05
RAF1-201ENST00000251849 SCRIBQ14160 1630 aa21.56■■□□□ 1.04
RAF1-201ENST00000251849 ABCC9O60706 1549 aa21.51■■□□□ 1.03
RAF1-201ENST00000251849 SUPT16HQ9Y5B9 1047 aaKnown RBP21.51■■□□□ 1.03
RAF1-201ENST00000251849 TSHZ2Q9NRE2 1034 aa21.41■■□□□ 1.02
RAF1-201ENST00000251849 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
RAF1-201ENST00000251849 KCNH8Q96L42 1107 aa21.37■■□□□ 1.01
RAF1-201ENST00000251849 ANP32EQ9BTT0 268 aa21.35■■□□□ 1.01
RAF1-201ENST00000251849 CECR2Q9BXF3 1484 aa21.33■■□□□ 1.01
RAF1-201ENST00000251849 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
RAF1-201ENST00000251849 ITGAEP38570 1179 aa21.29■■□□□ 1
RAF1-201ENST00000251849 APLP2Q06481 763 aa21.25■□□□□ 0.99
RAF1-201ENST00000251849 SOGA1O94964 1423 aa21.22■□□□□ 0.99
RAF1-201ENST00000251849 FKBP8Q14318 412 aa21.22■□□□□ 0.99
RAF1-201ENST00000251849 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
RAF1-201ENST00000251849 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
RAF1-201ENST00000251849 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
RAF1-201ENST00000251849 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
RAF1-201ENST00000251849 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
RAF1-201ENST00000251849 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
RAF1-201ENST00000251849 TRIM52Q96A61 297 aa21.07■□□□□ 0.96
RAF1-201ENST00000251849 WIZO95785 1651 aa21.05■□□□□ 0.96
RAF1-201ENST00000251849 IRX6P78412 446 aaPredicted RBP21.01■□□□□ 0.95
RAF1-201ENST00000251849 DDX10Q13206 875 aaKnown RBP20.99■□□□□ 0.95
RAF1-201ENST00000251849 RBM19Q9Y4C8 960 aaKnown RBP20.96■□□□□ 0.95
RAF1-201ENST00000251849 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.942e-6■■□□□ 11.9
RAF1-201ENST00000251849 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
RAF1-201ENST00000251849 NEFLP07196 543 aa20.93■□□□□ 0.94
RAF1-201ENST00000251849 PRKCSHP14314 528 aaPredicted RBP20.88■□□□□ 0.93
RAF1-201ENST00000251849 ERICH6Q7L0X2 663 aa20.88■□□□□ 0.93
RAF1-201ENST00000251849 CLIP1P30622 1438 aa20.79■□□□□ 0.92
RAF1-201ENST00000251849 MSH5O43196 834 aa20.78■□□□□ 0.92
RAF1-201ENST00000251849 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
RAF1-201ENST00000251849 DHX57Q6P158 1386 aaKnown RBP20.74■□□□□ 0.91
RAF1-201ENST00000251849 SIN3AQ96ST3 1273 aa20.73■□□□□ 0.91
RAF1-201ENST00000251849 CLSPNQ9HAW4 1339 aa20.72■□□□□ 0.91
RAF1-201ENST00000251849 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
RAF1-201ENST00000251849 GOLGA3Q08378 1498 aa20.7■□□□□ 0.9
RAF1-201ENST00000251849 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
RAF1-201ENST00000251849 NBR1Q14596 966 aa20.65■□□□□ 0.9
RAF1-201ENST00000251849 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
RAF1-201ENST00000251849 FAM50AQ14320 339 aaKnown RBP20.56■□□□□ 0.88
RAF1-201ENST00000251849 VPS8Q8N3P4 1428 aa20.55■□□□□ 0.88
RAF1-201ENST00000251849 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
RAF1-201ENST00000251849 ANP32CO43423 234 aa20.53■□□□□ 0.88
RAF1-201ENST00000251849 CDK11AQ9UQ88 783 aaPredicted RBP20.52■□□□□ 0.88
RAF1-201ENST00000251849 RAPGEF2Q9Y4G8 1499 aa20.51■□□□□ 0.87
RAF1-201ENST00000251849 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
RAF1-201ENST00000251849 DEKP35659 375 aaKnown RBP20.47■□□□□ 0.87
RAF1-201ENST00000251849 RTN4Q9NQC3 1192 aaKnown RBP20.45■□□□□ 0.86
RAF1-201ENST00000251849 ANO8Q9HCE9 1232 aaPredicted RBP20.45■□□□□ 0.86
RAF1-201ENST00000251849 EIF4G1Q04637 1599 aaKnown RBP20.43■□□□□ 0.86
RAF1-201ENST00000251849 B4GALNT3Q6L9W6 998 aa20.43■□□□□ 0.86
RAF1-201ENST00000251849 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
RAF1-201ENST00000251849 P3H3Q8IVL6 736 aa20.42■□□□□ 0.86
RAF1-201ENST00000251849 EEA1Q15075 1411 aa20.39■□□□□ 0.86
RAF1-201ENST00000251849 CCDC136Q96JN2 1154 aa20.39■□□□□ 0.85
RAF1-201ENST00000251849 BAZ1BQ9UIG0 1483 aaKnown RBP20.38■□□□□ 0.85
RAF1-201ENST00000251849 RAB3GAP2Q9H2M9 1393 aa20.36■□□□□ 0.85
RAF1-201ENST00000251849 SMARCA2P51531 1590 aa20.35■□□□□ 0.85
RAF1-201ENST00000251849 NACADO15069 1562 aa20.33■□□□□ 0.84
RAF1-201ENST00000251849 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.84
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