RNA–Protein interactions for RNA: ENST00000251195.9

CLSPN-201, Transcript of claspin, humanhuman

TSL 1 (best) BASIC

Gene CLSPN, Length 4,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-201ENST00000251195 IGF1RP08069 1367 aa10.94□□□□□ -0.66
CLSPN-201ENST00000251195 ACIN1Q9UKV3 1341 aaKnown RBP10.94□□□□□ -0.66
CLSPN-201ENST00000251195 DIEXFQ68CQ4 756 aaKnown RBP10.93□□□□□ -0.66
CLSPN-201ENST00000251195 ARID4BQ4LE39 1312 aaPredicted RBP10.92□□□□□ -0.66
CLSPN-201ENST00000251195 FAM50AQ14320 339 aaKnown RBP10.92□□□□□ -0.66
CLSPN-201ENST00000251195 PRDM2Q13029 1718 aa10.89□□□□□ -0.67
CLSPN-201ENST00000251195 TDRD9Q8NDG6 1382 aaKnown RBP10.89□□□□□ -0.67
CLSPN-201ENST00000251195 BCL11AQ9H165 835 aa10.89□□□□□ -0.67
CLSPN-201ENST00000251195 ARHGAP35Q9NRY4 1499 aa10.89□□□□□ -0.67
CLSPN-201ENST00000251195 YTHDC1Q96MU7 727 aaKnown RBP10.87□□□□□ -0.67
CLSPN-201ENST00000251195 TOPBP1Q92547 1522 aa10.87□□□□□ -0.67
CLSPN-201ENST00000251195 PLPPR3Q6T4P5 718 aa10.86□□□□□ -0.67
CLSPN-201ENST00000251195 POLA1P09884 1462 aaPredicted RBP10.86□□□□□ -0.67
CLSPN-201ENST00000251195 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
CLSPN-201ENST00000251195 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
CLSPN-201ENST00000251195 CYB5RLQ6IPT4 315 aa10.84□□□□□ -0.67
CLSPN-201ENST00000251195 DNMBPQ6XZF7 1577 aa10.84□□□□□ -0.67
CLSPN-201ENST00000251195 FHOD3Q2V2M9 1422 aa10.84□□□□□ -0.67
CLSPN-201ENST00000251195 PDS5BQ9NTI5 1447 aa10.82□□□□□ -0.68
CLSPN-201ENST00000251195 CCNB3Q8WWL7 1395 aa10.81□□□□□ -0.68
CLSPN-201ENST00000251195 URB2Q14146 1524 aaKnown RBP10.8□□□□□ -0.68
CLSPN-201ENST00000251195 ABCA10Q8WWZ4 1543 aa10.77□□□□□ -0.68
CLSPN-201ENST00000251195 NEUROD1Q13562 356 aa10.77□□□□□ -0.69
CLSPN-201ENST00000251195 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.69
CLSPN-201ENST00000251195 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
CLSPN-201ENST00000251195 DMRT2Q9Y5R5 561 aa10.75□□□□□ -0.69
CLSPN-201ENST00000251195 GAPVD1Q14C86 1478 aa10.75□□□□□ -0.69
CLSPN-201ENST00000251195 CENPBP07199 599 aaPredicted RBP10.74□□□□□ -0.69
CLSPN-201ENST00000251195 DHX57Q6P158 1386 aaKnown RBP10.73□□□□□ -0.69
CLSPN-201ENST00000251195 KIF21AQ7Z4S6 1674 aa10.73□□□□□ -0.69
CLSPN-201ENST00000251195 MTUS2Q5JR59 1369 aa10.73□□□□□ -0.69
CLSPN-201ENST00000251195 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
CLSPN-201ENST00000251195 TIAM1Q13009 1591 aa10.73□□□□□ -0.69
CLSPN-201ENST00000251195 PHLDB1Q86UU1 1377 aa10.72□□□□□ -0.69
CLSPN-201ENST00000251195 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.696e-7■■■■■ 49.8
CLSPN-201ENST00000251195 RRBP1Q9P2E9 1410 aaKnown RBP10.72□□□□□ -0.69
CLSPN-201ENST00000251195 BCANQ96GW7 911 aa10.71□□□□□ -0.69
CLSPN-201ENST00000251195 LRRC9Q6ZRR7 1453 aa10.71□□□□□ -0.69
CLSPN-201ENST00000251195 RAB3GAP2Q9H2M9 1393 aa10.7□□□□□ -0.7
CLSPN-201ENST00000251195 MIER1Q8N108 512 aa10.7□□□□□ -0.7
CLSPN-201ENST00000251195 ERICH6Q7L0X2 663 aa10.69□□□□□ -0.7
CLSPN-201ENST00000251195 CUL7Q14999 1698 aa10.69□□□□□ -0.7
CLSPN-201ENST00000251195 CHIC2Q9UKJ5 165 aa10.67□□□□□ -0.7
CLSPN-201ENST00000251195 SIN3AQ96ST3 1273 aa10.67□□□□□ -0.7
CLSPN-201ENST00000251195 FMN1Q68DA7 1419 aa10.66□□□□□ -0.7
CLSPN-201ENST00000251195 DISP3Q9P2K9 1392 aa10.66□□□□□ -0.7
CLSPN-201ENST00000251195 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
CLSPN-201ENST00000251195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.65□□□□□ -0.72e-7■■■■□ 23.8
CLSPN-201ENST00000251195 CTTNBP2Q8WZ74 1663 aa10.65□□□□□ -0.7
CLSPN-201ENST00000251195 SETD5Q9C0A6 1442 aa10.65□□□□□ -0.71
CLSPN-201ENST00000251195 CASKIN1Q8WXD9 1431 aa10.64□□□□□ -0.71
CLSPN-201ENST00000251195 FYCO1Q9BQS8 1478 aa10.64□□□□□ -0.71
CLSPN-201ENST00000251195 EFCAB5A4FU69 1503 aa10.64□□□□□ -0.71
CLSPN-201ENST00000251195 MRC2Q9UBG0 1479 aa10.63□□□□□ -0.71
CLSPN-201ENST00000251195 GTF3C3Q9Y5Q9 886 aa10.63□□□□□ -0.71
CLSPN-201ENST00000251195 ANP32EQ9BTT0 268 aa10.62□□□□□ -0.71
CLSPN-201ENST00000251195 TRIM52Q96A61 297 aa10.62□□□□□ -0.71
CLSPN-201ENST00000251195 RRP7BPQ9NSQ0 103 aa10.62□□□□□ -0.71
CLSPN-201ENST00000251195 ABCA5Q8WWZ7 1642 aa10.62□□□□□ -0.71
CLSPN-201ENST00000251195 HIRIP3Q9BW71 556 aaPredicted RBP10.61□□□□□ -0.71
CLSPN-201ENST00000251195 CLSPNQ9HAW4 1339 aa10.61□□□□□ -0.71
CLSPN-201ENST00000251195 MEX3CQ5U5Q3 659 aaKnown RBP10.6□□□□□ -0.71
CLSPN-201ENST00000251195 ZNF608Q9ULD9 1512 aaPredicted RBP10.6□□□□□ -0.71
CLSPN-201ENST00000251195 WDR97A6NE52 1622 aa10.6□□□□□ -0.71
CLSPN-201ENST00000251195 CFAP43Q8NDM7 1665 aa10.59□□□□□ -0.71
CLSPN-201ENST00000251195 MAP3K1Q13233 1512 aa10.58□□□□□ -0.72
CLSPN-201ENST00000251195 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
CLSPN-201ENST00000251195 GRIN2BQ13224 1484 aa10.57□□□□□ -0.72
CLSPN-201ENST00000251195 ZNF777Q9ULD5 760 aaPredicted RBP10.57□□□□□ -0.72
CLSPN-201ENST00000251195 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
CLSPN-201ENST00000251195 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
CLSPN-201ENST00000251195 PBRM1Q86U86 1689 aa10.55□□□□□ -0.72
CLSPN-201ENST00000251195 SNAPC4Q5SXM2 1469 aa10.55□□□□□ -0.72
CLSPN-201ENST00000251195 HAP1P54257 671 aaPredicted RBP10.54□□□□□ -0.72
CLSPN-201ENST00000251195 IFT140Q96RY7 1462 aa10.53□□□□□ -0.72
CLSPN-201ENST00000251195 IQGAP2Q13576 1575 aa10.53□□□□□ -0.72
CLSPN-201ENST00000251195 CDK13Q14004 1512 aaKnown RBP10.53□□□□□ -0.72
CLSPN-201ENST00000251195 STAG3Q9UJ98 1225 aa10.53□□□□□ -0.72
CLSPN-201ENST00000251195 TONSLQ96HA7 1378 aa10.53□□□□□ -0.72
CLSPN-201ENST00000251195 DDX10Q13206 875 aaKnown RBP10.52□□□□□ -0.72
CLSPN-201ENST00000251195 C14orf37Q86TY3 774 aa10.52□□□□□ -0.72
CLSPN-201ENST00000251195 MYOM3Q5VTT5 1437 aa10.52□□□□□ -0.73
CLSPN-201ENST00000251195 ADAMTS12P58397 1594 aa10.52□□□□□ -0.73
CLSPN-201ENST00000251195 SAMD9Q5K651 1589 aa10.51□□□□□ -0.73
CLSPN-201ENST00000251195 MAPKBP1O60336 1514 aa10.51□□□□□ -0.73
CLSPN-201ENST00000251195 CCDC18Q5T9S5 1454 aa10.51□□□□□ -0.73
CLSPN-201ENST00000251195 CDK11AQ9UQ88 783 aaPredicted RBP10.49□□□□□ -0.73
CLSPN-201ENST00000251195 SUPT6HQ7KZ85 1726 aaKnown RBP10.49□□□□□ -0.73
CLSPN-201ENST00000251195 EHBP1L1Q8N3D4 1523 aa10.49□□□□□ -0.73
CLSPN-201ENST00000251195 PTPRKQ15262 1439 aa10.48□□□□□ -0.73
CLSPN-201ENST00000251195 HECW1Q76N89 1606 aa10.48□□□□□ -0.73
CLSPN-201ENST00000251195 EPRSP07814 1512 aaKnown RBP10.47□□□□□ -0.73
CLSPN-201ENST00000251195 ZNF644Q9H582 1327 aaPredicted RBP10.47□□□□□ -0.73
CLSPN-201ENST00000251195 LRRIQ1Q96JM4 1722 aa10.46□□□□□ -0.73
CLSPN-201ENST00000251195 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.73
CLSPN-201ENST00000251195 A0A0G2JS52 829 aa10.46□□□□□ -0.73
CLSPN-201ENST00000251195 MAGI3Q5TCQ9 1506 aa10.46□□□□□ -0.74
CLSPN-201ENST00000251195 WDR62O43379 1518 aa10.46□□□□□ -0.74
CLSPN-201ENST00000251195 GRIN2AQ12879 1464 aa10.45□□□□□ -0.74
CLSPN-201ENST00000251195 PTPN23Q9H3S7 1636 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms