RNA–Protein interactions for RNA: ENST00000251195.9

CLSPN-201, Transcript of claspin, humanhuman

TSL 1 (best) BASIC

Gene CLSPN, Length 4,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-201ENST00000251195 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
CLSPN-201ENST00000251195 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
CLSPN-201ENST00000251195 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
CLSPN-201ENST00000251195 SUPT5HO00267 1087 aaKnown RBP12.99□□□□□ -0.33
CLSPN-201ENST00000251195 CCDC180Q9P1Z9 1646 aa12.98□□□□□ -0.33
CLSPN-201ENST00000251195 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
CLSPN-201ENST00000251195 AEBP2Q6ZN18 517 aaPredicted RBP12.76□□□□□ -0.37
CLSPN-201ENST00000251195 FAM9AQ8IZU1 332 aaPredicted RBP12.54□□□□□ -0.4
CLSPN-201ENST00000251195 ABCC9O60706 1549 aa12.48□□□□□ -0.41
CLSPN-201ENST00000251195 DCAF1Q9Y4B6 1507 aa12.39□□□□□ -0.43
CLSPN-201ENST00000251195 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
CLSPN-201ENST00000251195 CHIC1Q5VXU3 224 aa12.33□□□□□ -0.44
CLSPN-201ENST00000251195 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
CLSPN-201ENST00000251195 MYO15BQ96JP2 1530 aa12.2□□□□□ -0.46
CLSPN-201ENST00000251195 EHMT2Q96KQ7 1210 aa12.13□□□□□ -0.47
CLSPN-201ENST00000251195 NACADO15069 1562 aa12.1□□□□□ -0.47
CLSPN-201ENST00000251195 RSF1Q96T23 1441 aaPredicted RBP12.09□□□□□ -0.47
CLSPN-201ENST00000251195 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
CLSPN-201ENST00000251195 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
CLSPN-201ENST00000251195 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
CLSPN-201ENST00000251195 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
CLSPN-201ENST00000251195 MYT1Q01538 1121 aa12□□□□□ -0.49
CLSPN-201ENST00000251195 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
CLSPN-201ENST00000251195 PCGF6Q9BYE7 350 aa11.97□□□□□ -0.49
CLSPN-201ENST00000251195 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
CLSPN-201ENST00000251195 TRHP20396 242 aaPredicted RBP11.92□□□□□ -0.5
CLSPN-201ENST00000251195 WIZO95785 1651 aa11.88□□□□□ -0.51
CLSPN-201ENST00000251195 HRCP23327 699 aa11.86□□□□□ -0.51
CLSPN-201ENST00000251195 FOXD1Q16676 465 aa11.79□□□□□ -0.52
CLSPN-201ENST00000251195 BAZ1AQ9NRL2 1556 aaPredicted RBP11.78□□□□□ -0.52
CLSPN-201ENST00000251195 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
CLSPN-201ENST00000251195 PPARGC1BQ86YN6 1023 aaKnown RBP11.72□□□□□ -0.53
CLSPN-201ENST00000251195 TTBK1Q5TCY1 1321 aaPredicted RBP11.7□□□□□ -0.54
CLSPN-201ENST00000251195 SMARCA4P51532 1647 aa11.69□□□□□ -0.54
CLSPN-201ENST00000251195 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLSPN-201ENST00000251195 TRIM26Q12899 539 aaPredicted RBP11.64□□□□□ -0.55
CLSPN-201ENST00000251195 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
CLSPN-201ENST00000251195 TOP2AP11388 1531 aaKnown RBP11.64□□□□□ -0.55
CLSPN-201ENST00000251195 ABCC8Q09428 1581 aa11.63□□□□□ -0.55
CLSPN-201ENST00000251195 BICRAQ9NZM4 1560 aa11.59□□□□□ -0.55
CLSPN-201ENST00000251195 SMARCA2P51531 1590 aa11.56□□□□□ -0.56
CLSPN-201ENST00000251195 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
CLSPN-201ENST00000251195 RANGAP1P46060 587 aaPredicted RBP11.55□□□□□ -0.56
CLSPN-201ENST00000251195 DCAF8L1A6NGE4 600 aa11.55□□□□□ -0.56
CLSPN-201ENST00000251195 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
CLSPN-201ENST00000251195 SOGA1O94964 1423 aa11.49□□□□□ -0.57
CLSPN-201ENST00000251195 EIF4G1Q04637 1599 aaKnown RBP11.46□□□□□ -0.58
CLSPN-201ENST00000251195 ATAD2BQ9ULI0 1458 aa11.46□□□□□ -0.58
CLSPN-201ENST00000251195 CSRNP3Q8WYN3 585 aa11.44□□□□□ -0.58
CLSPN-201ENST00000251195 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.582e-9■■■■■ 39.4
CLSPN-201ENST00000251195 SCAF1Q9H7N4 1312 aaKnown RBP11.43□□□□□ -0.58
CLSPN-201ENST00000251195 ERCC6Q03468 1493 aa11.42□□□□□ -0.58
CLSPN-201ENST00000251195 RUSC2Q8N2Y8 1516 aa11.42□□□□□ -0.58
CLSPN-201ENST00000251195 DNAJC5Q9H3Z4 198 aa11.4□□□□□ -0.58
CLSPN-201ENST00000251195 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
CLSPN-201ENST00000251195 CEP162Q5TB80 1403 aa11.36□□□□□ -0.59
CLSPN-201ENST00000251195 ESF1Q9H501 851 aaKnown RBP11.35□□□□□ -0.59
CLSPN-201ENST00000251195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.35□□□□□ -0.59
CLSPN-201ENST00000251195 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.59
CLSPN-201ENST00000251195 PEG3Q9GZU2 1588 aa11.33□□□□□ -0.6
CLSPN-201ENST00000251195 SYNJ1O43426 1573 aa11.31□□□□□ -0.6
CLSPN-201ENST00000251195 ZEB1P37275 1124 aaPredicted RBP11.31□□□□□ -0.6
CLSPN-201ENST00000251195 APLP2Q06481 763 aa11.3□□□□□ -0.6
CLSPN-201ENST00000251195 FBLN2P98095 1184 aa11.3□□□□□ -0.6
CLSPN-201ENST00000251195 GOLGA3Q08378 1498 aa11.29□□□□□ -0.6
CLSPN-201ENST00000251195 EEA1Q15075 1411 aa11.29□□□□□ -0.6
CLSPN-201ENST00000251195 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
CLSPN-201ENST00000251195 CEP164Q9UPV0 1460 aa11.23□□□□□ -0.61
CLSPN-201ENST00000251195 HNRNPUL2Q1KMD3 747 aaKnown RBP11.23□□□□□ -0.61
CLSPN-201ENST00000251195 CLIP1P30622 1438 aa11.21□□□□□ -0.61
CLSPN-201ENST00000251195 CHMP7Q8WUX9 453 aaPredicted RBP11.21□□□□□ -0.62
CLSPN-201ENST00000251195 NCAPD3P42695 1498 aa11.2□□□□□ -0.62
CLSPN-201ENST00000251195 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
CLSPN-201ENST00000251195 PHF23Q9BUL5 403 aaPredicted RBP11.19□□□□□ -0.62
CLSPN-201ENST00000251195 HMGXB3Q12766 1538 aa11.16□□□□□ -0.62
CLSPN-201ENST00000251195 OSCARQ8IYS5 282 aa11.15□□□□□ -0.63
CLSPN-201ENST00000251195 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
CLSPN-201ENST00000251195 ATP1B4Q9UN42 357 aaPredicted RBP11.13□□□□□ -0.63
CLSPN-201ENST00000251195 CUX1P39880 1505 aa11.12□□□□□ -0.63
CLSPN-201ENST00000251195 KIF27Q86VH2 1401 aa11.1□□□□□ -0.63
CLSPN-201ENST00000251195 KIF21BO75037 1637 aa11.1□□□□□ -0.63
CLSPN-201ENST00000251195 CC2D2AQ9P2K1 1620 aa11.1□□□□□ -0.63
CLSPN-201ENST00000251195 CFTRP13569 1480 aa11.09□□□□□ -0.63
CLSPN-201ENST00000251195 ITGAEP38570 1179 aa11.08□□□□□ -0.64
CLSPN-201ENST00000251195 CADPSQ9ULU8 1353 aa11.08□□□□□ -0.64
CLSPN-201ENST00000251195 P3H3Q8IVL6 736 aa11.08□□□□□ -0.64
CLSPN-201ENST00000251195 CUX2O14529 1486 aa11.07□□□□□ -0.64
CLSPN-201ENST00000251195 VPS8Q8N3P4 1428 aa11.06□□□□□ -0.64
CLSPN-201ENST00000251195 BIVM-ERCC5R4GMW8 1640 aa11.05□□□□□ -0.64
CLSPN-201ENST00000251195 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
CLSPN-201ENST00000251195 NESP48681 1621 aa11.01□□□□□ -0.65
CLSPN-201ENST00000251195 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
CLSPN-201ENST00000251195 FANCD2Q9BXW9 1451 aa11□□□□□ -0.65
CLSPN-201ENST00000251195 KANK4Q5T7N3 995 aaPredicted RBP10.99□□□□□ -0.65
CLSPN-201ENST00000251195 PRXQ9BXM0 1461 aa10.98□□□□□ -0.65
CLSPN-201ENST00000251195 DNAJC5BQ9UF47 199 aa10.98□□□□□ -0.65
CLSPN-201ENST00000251195 CARMIL1Q5VZK9 1371 aa10.97□□□□□ -0.65
CLSPN-201ENST00000251195 RAD54L2Q9Y4B4 1467 aa10.96□□□□□ -0.65
CLSPN-201ENST00000251195 ERICH3Q5RHP9 1530 aa10.95□□□□□ -0.66
CLSPN-201ENST00000251195 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms