RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 ABCA10Q8WWZ4 1543 aa5.49□□□□□ -1.53
PHTF2-201ENST00000248550 PHLDB1Q86UU1 1377 aa5.49□□□□□ -1.53
PHTF2-201ENST00000248550 C14orf37Q86TY3 774 aa5.49□□□□□ -1.53
PHTF2-201ENST00000248550 CLASP1Q7Z460 1538 aa5.49□□□□□ -1.53
PHTF2-201ENST00000248550 CCDC88BA6NC98 1476 aa5.49□□□□□ -1.53
PHTF2-201ENST00000248550 CARMIL2Q6F5E8 1435 aa5.48□□□□□ -1.53
PHTF2-201ENST00000248550 POGZQ7Z3K3 1410 aa5.47□□□□□ -1.53
PHTF2-201ENST00000248550 TARBP1Q13395 1621 aaKnown RBP5.47□□□□□ -1.53
PHTF2-201ENST00000248550 FAM69CQ0P6D2 419 aa5.47□□□□□ -1.53
PHTF2-201ENST00000248550 TEX14Q8IWB6 1497 aa5.47□□□□□ -1.53
PHTF2-201ENST00000248550 GAPVD1Q14C86 1478 aa5.46□□□□□ -1.54
PHTF2-201ENST00000248550 CUL7Q14999 1698 aa5.46□□□□□ -1.54
PHTF2-201ENST00000248550 DISP3Q9P2K9 1392 aa5.46□□□□□ -1.54
PHTF2-201ENST00000248550 POLA1P09884 1462 aaPredicted RBP5.45□□□□□ -1.54
PHTF2-201ENST00000248550 SNAPC4Q5SXM2 1469 aa5.44□□□□□ -1.54
PHTF2-201ENST00000248550 GOLGA3Q08378 1498 aa5.44□□□□□ -1.54
PHTF2-201ENST00000248550 KIAA0586Q9BVV6 1533 aa5.44□□□□□ -1.54
PHTF2-201ENST00000248550 PLB1Q6P1J6 1458 aa5.43□□□□□ -1.54
PHTF2-201ENST00000248550 PBRM1Q86U86 1689 aa5.43□□□□□ -1.54
PHTF2-201ENST00000248550 FGD5Q6ZNL6 1462 aa5.43□□□□□ -1.54
PHTF2-201ENST00000248550 FBXO41Q8TF61 875 aa5.43□□□□□ -1.54
PHTF2-201ENST00000248550 NUP160Q12769 1436 aa5.43□□□□□ -1.54
PHTF2-201ENST00000248550 CHD1O14646 1710 aa5.43□□□□□ -1.54
PHTF2-201ENST00000248550 BIVM-ERCC5R4GMW8 1640 aa5.42□□□□□ -1.54
PHTF2-201ENST00000248550 ADAMTS12P58397 1594 aa5.42□□□□□ -1.54
PHTF2-201ENST00000248550 MAPKBP1O60336 1514 aa5.42□□□□□ -1.54
PHTF2-201ENST00000248550 ABCA5Q8WWZ7 1642 aa5.42□□□□□ -1.54
PHTF2-201ENST00000248550 GRIN2AQ12879 1464 aa5.41□□□□□ -1.54
PHTF2-201ENST00000248550 TOP2BQ02880 1626 aa5.41□□□□□ -1.54
PHTF2-201ENST00000248550 TOM1O60784 492 aa5.41□□□□□ -1.54
PHTF2-201ENST00000248550 ZNF608Q9ULD9 1512 aaPredicted RBP5.41□□□□□ -1.54
PHTF2-201ENST00000248550 KIF27Q86VH2 1401 aa5.4□□□□□ -1.54
PHTF2-201ENST00000248550 SHROOM2Q13796 1616 aa5.4□□□□□ -1.54
PHTF2-201ENST00000248550 UHRF1BP1LA0JNW5 1464 aa5.4□□□□□ -1.54
PHTF2-201ENST00000248550 A0A0G2JS52 829 aa5.4□□□□□ -1.55
PHTF2-201ENST00000248550 MYT1Q01538 1121 aa5.4□□□□□ -1.55
PHTF2-201ENST00000248550 GLI2P10070 1586 aa5.4□□□□□ -1.55
PHTF2-201ENST00000248550 ARAP1Q96P48 1450 aa5.4□□□□□ -1.55
PHTF2-201ENST00000248550 PLEKHD1A6NEE1 506 aa5.37□□□□□ -1.55
PHTF2-201ENST00000248550 PPP1R15AO75807 674 aaPredicted RBP5.37□□□□□ -1.55
PHTF2-201ENST00000248550 TNIKQ9UKE5 1360 aa5.36□□□□□ -1.55
PHTF2-201ENST00000248550 EEA1Q15075 1411 aa5.36□□□□□ -1.55
PHTF2-201ENST00000248550 ERCC6L2Q5T890 1561 aa5.35□□□□□ -1.55
PHTF2-201ENST00000248550 CFAP74Q9C0B2 1584 aa5.35□□□□□ -1.55
PHTF2-201ENST00000248550 SUPT5HO00267 1087 aaKnown RBP5.35□□□□□ -1.55
PHTF2-201ENST00000248550 KCNH8Q96L42 1107 aa5.35□□□□□ -1.55
PHTF2-201ENST00000248550 EID1Q9Y6B2 187 aa5.35□□□□□ -1.55
PHTF2-201ENST00000248550 AQRO60306 1485 aaKnown RBP eCLIP5.35□□□□□ -1.553e-7■■■■■ 36.6
PHTF2-201ENST00000248550 ABCC10Q5T3U5 1492 aa5.35□□□□□ -1.55
PHTF2-201ENST00000248550 CEP170Q5SW79 1584 aa5.34□□□□□ -1.55
PHTF2-201ENST00000248550 CUX1P39880 1505 aa5.34□□□□□ -1.55
PHTF2-201ENST00000248550 PPP1R1BQ9UD71 204 aaPredicted RBP5.33□□□□□ -1.56
PHTF2-201ENST00000248550 UBAP1LF5GYI3 381 aa5.33□□□□□ -1.56
PHTF2-201ENST00000248550 LMTK3Q96Q04 1460 aa5.32□□□□□ -1.56
PHTF2-201ENST00000248550 PRG4Q92954 1404 aaPredicted RBP5.31□□□□□ -1.56
PHTF2-201ENST00000248550 MLECQ14165 292 aa5.31□□□□□ -1.56
PHTF2-201ENST00000248550 UBTFP17480 764 aaKnown RBP5.31□□□□□ -1.56
PHTF2-201ENST00000248550 PTPRGP23470 1445 aa5.3□□□□□ -1.56
PHTF2-201ENST00000248550 KDM6BO15054 1643 aa5.3□□□□□ -1.56
PHTF2-201ENST00000248550 TDRD9Q8NDG6 1382 aaKnown RBP5.3□□□□□ -1.56
PHTF2-201ENST00000248550 NPM2Q86SE8 214 aaKnown RBP5.3□□□□□ -1.56
PHTF2-201ENST00000248550 RUSC2Q8N2Y8 1516 aa5.3□□□□□ -1.56
PHTF2-201ENST00000248550 ABCC2Q92887 1545 aa5.3□□□□□ -1.56
PHTF2-201ENST00000248550 ARID3CA6NKF2 412 aa5.29□□□□□ -1.56
PHTF2-201ENST00000248550 RAD54L2Q9Y4B4 1467 aa5.29□□□□□ -1.56
PHTF2-201ENST00000248550 ZRANB1Q9UGI0 708 aa5.29□□□□□ -1.56
PHTF2-201ENST00000248550 NGLY1Q96IV0 654 aa5.28□□□□□ -1.56
PHTF2-201ENST00000248550 UGGT2Q9NYU1 1516 aa5.28□□□□□ -1.56
PHTF2-201ENST00000248550 IQGAP2Q13576 1575 aa5.28□□□□□ -1.56
PHTF2-201ENST00000248550 UACAQ9BZF9 1416 aa5.28□□□□□ -1.56
PHTF2-201ENST00000248550 CCDC9Q9Y3X0 531 aaKnown RBP5.28□□□□□ -1.56
PHTF2-201ENST00000248550 MAGI3Q5TCQ9 1506 aa5.28□□□□□ -1.56
PHTF2-201ENST00000248550 JPH4Q96JJ6 628 aa5.27□□□□□ -1.57
PHTF2-201ENST00000248550 CFAP43Q8NDM7 1665 aa5.27□□□□□ -1.57
PHTF2-201ENST00000248550 NEO1Q92859 1461 aa5.27□□□□□ -1.57
PHTF2-201ENST00000248550 RAPGEF2Q9Y4G8 1499 aa5.26□□□□□ -1.57
PHTF2-201ENST00000248550 RANGAP1P46060 587 aaPredicted RBP5.26□□□□□ -1.57
PHTF2-201ENST00000248550 ILDR1Q86SU0 546 aaPredicted RBP5.26□□□□□ -1.57
PHTF2-201ENST00000248550 MSH5O43196 834 aa5.26□□□□□ -1.57
PHTF2-201ENST00000248550 SOCS7O14512 581 aa5.25□□□□□ -1.57
PHTF2-201ENST00000248550 MAGI2Q86UL8 1455 aa5.25□□□□□ -1.57
PHTF2-201ENST00000248550 DIP2BQ9P265 1576 aa5.25□□□□□ -1.57
PHTF2-201ENST00000248550 EFCAB2Q5VUJ9 269 aa5.25□□□□□ -1.57
PHTF2-201ENST00000248550 TSPY4P0CV99 314 aa5.25□□□□□ -1.57
PHTF2-201ENST00000248550 TSPY10P0CW01 314 aa5.25□□□□□ -1.57
PHTF2-201ENST00000248550 FAM135AQ9P2D6 1515 aa5.25□□□□□ -1.57
PHTF2-201ENST00000248550 NUTM2BA6NNL0 878 aaPredicted RBP5.25□□□□□ -1.57
PHTF2-201ENST00000248550 NUTM2EB1AL46 878 aaPredicted RBP5.25□□□□□ -1.57
PHTF2-201ENST00000248550 NUTM2DQ5VT03 806 aaPredicted RBP5.25□□□□□ -1.57
PHTF2-201ENST00000248550 NUTM2AQ8IVF1 878 aaPredicted RBP5.25□□□□□ -1.57
PHTF2-201ENST00000248550 CARMIL1Q5VZK9 1371 aa5.25□□□□□ -1.57
PHTF2-201ENST00000248550 EFCAB5A4FU69 1503 aa5.24□□□□□ -1.57
PHTF2-201ENST00000248550 PIP4K2BP78356 416 aa5.24□□□□□ -1.57
PHTF2-201ENST00000248550 IQSEC2Q5JU85 1478 aa5.24□□□□□ -1.57
PHTF2-201ENST00000248550 NBPF8Q3BBV2 869 aa5.23□□□□□ -1.57
PHTF2-201ENST00000248550 NBPF14Q5TI25 921 aa5.23□□□□□ -1.57
PHTF2-201ENST00000248550 KDM5BQ9UGL1 1544 aa5.23□□□□□ -1.57
PHTF2-201ENST00000248550 FANCAO15360 1455 aa5.23□□□□□ -1.57
PHTF2-201ENST00000248550 PPP6R1Q9UPN7 881 aa5.23□□□□□ -1.57
PHTF2-201ENST00000248550 WDR7Q9Y4E6 1490 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms