RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
SF1-201ENST00000227503 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
SF1-201ENST00000227503 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
SF1-201ENST00000227503 MSH5O43196 834 aa20.16■□□□□ 0.82
SF1-201ENST00000227503 TIAM1Q13009 1591 aa20.15■□□□□ 0.82
SF1-201ENST00000227503 TRIM52Q96A61 297 aa20.09■□□□□ 0.81
SF1-201ENST00000227503 LRRC9Q6ZRR7 1453 aa20.08■□□□□ 0.8
SF1-201ENST00000227503 CC2D2AQ9P2K1 1620 aa20.07■□□□□ 0.8
SF1-201ENST00000227503 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
SF1-201ENST00000227503 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
SF1-201ENST00000227503 RAB3GAP2Q9H2M9 1393 aa20.05■□□□□ 0.8
SF1-201ENST00000227503 NEFLP07196 543 aa20.02■□□□□ 0.8
SF1-201ENST00000227503 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
SF1-201ENST00000227503 PHLDB1Q86UU1 1377 aa20.02■□□□□ 0.8
SF1-201ENST00000227503 MAPKBP1O60336 1514 aa20.01■□□□□ 0.79
SF1-201ENST00000227503 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
SF1-201ENST00000227503 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
SF1-201ENST00000227503 CFAP43Q8NDM7 1665 aa19.99■□□□□ 0.79
SF1-201ENST00000227503 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
SF1-201ENST00000227503 PCF11O94913 1555 aaKnown RBP19.99■□□□□ 0.79
SF1-201ENST00000227503 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
SF1-201ENST00000227503 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
SF1-201ENST00000227503 PRKCSHP14314 528 aaPredicted RBP19.97■□□□□ 0.79
SF1-201ENST00000227503 IRX6P78412 446 aaPredicted RBP19.97■□□□□ 0.79
SF1-201ENST00000227503 POLA1P09884 1462 aaPredicted RBP19.96■□□□□ 0.79
SF1-201ENST00000227503 TOPBP1Q92547 1522 aa19.95■□□□□ 0.78
SF1-201ENST00000227503 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
SF1-201ENST00000227503 FHOD3Q2V2M9 1422 aa19.92■□□□□ 0.78
SF1-201ENST00000227503 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
SF1-201ENST00000227503 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
SF1-201ENST00000227503 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
SF1-201ENST00000227503 NESP48681 1621 aa19.89■□□□□ 0.77
SF1-201ENST00000227503 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
SF1-201ENST00000227503 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
SF1-201ENST00000227503 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.771e-7■■■■■ 49.1
SF1-201ENST00000227503 CUL7Q14999 1698 aa19.88■□□□□ 0.77
SF1-201ENST00000227503 ATP1B4Q9UN42 357 aaPredicted RBP19.84■□□□□ 0.77
SF1-201ENST00000227503 CTTNBP2Q8WZ74 1663 aa19.84■□□□□ 0.77
SF1-201ENST00000227503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.83■□□□□ 0.77
SF1-201ENST00000227503 SIN3AQ96ST3 1273 aa19.83■□□□□ 0.77
SF1-201ENST00000227503 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
SF1-201ENST00000227503 URB2Q14146 1524 aaKnown RBP19.79■□□□□ 0.76
SF1-201ENST00000227503 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
SF1-201ENST00000227503 FMN1Q68DA7 1419 aa19.78■□□□□ 0.76
SF1-201ENST00000227503 DEKP35659 375 aaKnown RBP19.76■□□□□ 0.75
SF1-201ENST00000227503 TIMELESSQ9UNS1 1208 aa19.75■□□□□ 0.75
SF1-201ENST00000227503 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
SF1-201ENST00000227503 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
SF1-201ENST00000227503 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
SF1-201ENST00000227503 FGD6Q6ZV73 1430 aa19.74■□□□□ 0.75
SF1-201ENST00000227503 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
SF1-201ENST00000227503 SAMD9Q5K651 1589 aa19.72■□□□□ 0.75
SF1-201ENST00000227503 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
SF1-201ENST00000227503 FANCIQ9NVI1 1328 aa19.72■□□□□ 0.75
SF1-201ENST00000227503 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
SF1-201ENST00000227503 ANP32CO43423 234 aa19.7■□□□□ 0.74
SF1-201ENST00000227503 NBR1Q14596 966 aa19.69■□□□□ 0.74
SF1-201ENST00000227503 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
SF1-201ENST00000227503 ANO8Q9HCE9 1232 aaPredicted RBP19.68■□□□□ 0.74
SF1-201ENST00000227503 LRRIQ1Q96JM4 1722 aa19.67■□□□□ 0.74
SF1-201ENST00000227503 PTPRKQ15262 1439 aa19.67■□□□□ 0.74
SF1-201ENST00000227503 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
SF1-201ENST00000227503 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
SF1-201ENST00000227503 HNRNPUQ00839 825 aaKnown RBP eCLIP19.66■□□□□ 0.74
SF1-201ENST00000227503 HFM1A2PYH4 1435 aa19.64■□□□□ 0.73
SF1-201ENST00000227503 CCDC18Q5T9S5 1454 aa19.63■□□□□ 0.73
SF1-201ENST00000227503 NCOA2Q15596 1464 aa19.62■□□□□ 0.73
SF1-201ENST00000227503 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
SF1-201ENST00000227503 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
SF1-201ENST00000227503 MYOM3Q5VTT5 1437 aa19.61■□□□□ 0.73
SF1-201ENST00000227503 PTPN23Q9H3S7 1636 aa19.6■□□□□ 0.73
SF1-201ENST00000227503 UACAQ9BZF9 1416 aa19.6■□□□□ 0.73
SF1-201ENST00000227503 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
SF1-201ENST00000227503 NAIPQ13075 1403 aa19.57■□□□□ 0.72
SF1-201ENST00000227503 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
SF1-201ENST00000227503 B4GALNT3Q6L9W6 998 aa19.57■□□□□ 0.72
SF1-201ENST00000227503 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
SF1-201ENST00000227503 PAK3O75914 559 aaPredicted RBP19.56■□□□□ 0.72
SF1-201ENST00000227503 TARBP1Q13395 1621 aaKnown RBP19.56■□□□□ 0.72
SF1-201ENST00000227503 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
SF1-201ENST00000227503 UGGT2Q9NYU1 1516 aa19.54■□□□□ 0.72
SF1-201ENST00000227503 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
SF1-201ENST00000227503 TONSLQ96HA7 1378 aa19.53■□□□□ 0.72
SF1-201ENST00000227503 MAGI3Q5TCQ9 1506 aa19.53■□□□□ 0.72
SF1-201ENST00000227503 SALL2Q9Y467 1007 aaPredicted RBP19.5■□□□□ 0.71
SF1-201ENST00000227503 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
SF1-201ENST00000227503 TCOF1Q13428 1488 aaKnown RBP19.47■□□□□ 0.71
SF1-201ENST00000227503 KDM5BQ9UGL1 1544 aa19.47■□□□□ 0.71
SF1-201ENST00000227503 RTN4Q9NQC3 1192 aaKnown RBP19.47■□□□□ 0.71
SF1-201ENST00000227503 NOP58Q9Y2X3 529 aaKnown RBP19.45■□□□□ 0.7
SF1-201ENST00000227503 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
SF1-201ENST00000227503 HECW1Q76N89 1606 aa19.44■□□□□ 0.7
SF1-201ENST00000227503 CCDC184Q52MB2 194 aa19.43■□□□□ 0.7
SF1-201ENST00000227503 PPP4R2Q9NY27 417 aa19.42■□□□□ 0.7
SF1-201ENST00000227503 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
SF1-201ENST00000227503 EPRSP07814 1512 aaKnown RBP19.42■□□□□ 0.7
SF1-201ENST00000227503 DENND4BO75064 1496 aaPredicted RBP19.41■□□□□ 0.7
SF1-201ENST00000227503 IL27Q8NEV9 243 aa19.41■□□□□ 0.7
SF1-201ENST00000227503 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
SF1-201ENST00000227503 GCC2Q8IWJ2 1684 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms