RNA–Protein interactions for RNA: ENST00000226004.7

DUSP3-201, Transcript of dual specificity phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP3, Length 4,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP3-201ENST00000226004 ANP32CO43423 234 aa13.15□□□□□ -0.3
DUSP3-201ENST00000226004 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
DUSP3-201ENST00000226004 TONSLQ96HA7 1378 aa13.14□□□□□ -0.31
DUSP3-201ENST00000226004 BCL11AQ9H165 835 aa13.13□□□□□ -0.31
DUSP3-201ENST00000226004 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
DUSP3-201ENST00000226004 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
DUSP3-201ENST00000226004 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
DUSP3-201ENST00000226004 KIF21BO75037 1637 aa13.08□□□□□ -0.32
DUSP3-201ENST00000226004 IGF1RP08069 1367 aa13.08□□□□□ -0.32
DUSP3-201ENST00000226004 FHOD3Q2V2M9 1422 aa13.06□□□□□ -0.32
DUSP3-201ENST00000226004 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
DUSP3-201ENST00000226004 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
DUSP3-201ENST00000226004 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
DUSP3-201ENST00000226004 DHX57Q6P158 1386 aaKnown RBP13.04□□□□□ -0.32
DUSP3-201ENST00000226004 CHMP7Q8WUX9 453 aaPredicted RBP13.03□□□□□ -0.32
DUSP3-201ENST00000226004 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
DUSP3-201ENST00000226004 FHAD1B1AJZ9 1412 aa13.03□□□□□ -0.32
DUSP3-201ENST00000226004 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
DUSP3-201ENST00000226004 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
DUSP3-201ENST00000226004 FANCD2Q9BXW9 1451 aa13.02□□□□□ -0.33
DUSP3-201ENST00000226004 CUX1P39880 1505 aa13.01□□□□□ -0.33
DUSP3-201ENST00000226004 CFTRP13569 1480 aa13□□□□□ -0.33
DUSP3-201ENST00000226004 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
DUSP3-201ENST00000226004 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
DUSP3-201ENST00000226004 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
DUSP3-201ENST00000226004 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
DUSP3-201ENST00000226004 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.33
DUSP3-201ENST00000226004 FOXD1Q16676 465 aa12.96□□□□□ -0.33
DUSP3-201ENST00000226004 NESP48681 1621 aa12.96□□□□□ -0.34
DUSP3-201ENST00000226004 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
DUSP3-201ENST00000226004 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
DUSP3-201ENST00000226004 ARHGAP35Q9NRY4 1499 aa12.95□□□□□ -0.34
DUSP3-201ENST00000226004 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
DUSP3-201ENST00000226004 FAM9BQ8IZU0 186 aa12.94□□□□□ -0.34
DUSP3-201ENST00000226004 PEG3Q9GZU2 1588 aa12.94□□□□□ -0.34
DUSP3-201ENST00000226004 IRX6P78412 446 aaPredicted RBP12.94□□□□□ -0.34
DUSP3-201ENST00000226004 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
DUSP3-201ENST00000226004 KDM2AQ9Y2K7 1162 aa12.92□□□□□ -0.34
DUSP3-201ENST00000226004 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
DUSP3-201ENST00000226004 RBM19Q9Y4C8 960 aaKnown RBP12.9□□□□□ -0.34
DUSP3-201ENST00000226004 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
DUSP3-201ENST00000226004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.9□□□□□ -0.356e-6■□□□□ 8.3
DUSP3-201ENST00000226004 CFDP1Q9UEE9 299 aaPredicted RBP12.89□□□□□ -0.35
DUSP3-201ENST00000226004 HMGXB3Q12766 1538 aa12.88□□□□□ -0.35
DUSP3-201ENST00000226004 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.35
DUSP3-201ENST00000226004 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
DUSP3-201ENST00000226004 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
DUSP3-201ENST00000226004 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
DUSP3-201ENST00000226004 TSPY4P0CV99 314 aa12.85□□□□□ -0.35
DUSP3-201ENST00000226004 TSPY10P0CW01 314 aa12.85□□□□□ -0.35
DUSP3-201ENST00000226004 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
DUSP3-201ENST00000226004 NBR1Q14596 966 aa12.84□□□□□ -0.35
DUSP3-201ENST00000226004 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
DUSP3-201ENST00000226004 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
DUSP3-201ENST00000226004 ERCC6Q03468 1493 aa12.83□□□□□ -0.36
DUSP3-201ENST00000226004 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
DUSP3-201ENST00000226004 LRRC9Q6ZRR7 1453 aa12.82□□□□□ -0.36
DUSP3-201ENST00000226004 RGL3Q3MIN7 710 aa12.8□□□□□ -0.36
DUSP3-201ENST00000226004 RRBP1Q9P2E9 1410 aaKnown RBP12.8□□□□□ -0.36
DUSP3-201ENST00000226004 GAPVD1Q14C86 1478 aa12.8□□□□□ -0.36
DUSP3-201ENST00000226004 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
DUSP3-201ENST00000226004 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.36
DUSP3-201ENST00000226004 HSPA5P11021 654 aaKnown RBP12.78□□□□□ -0.36
DUSP3-201ENST00000226004 MPHOSPH9Q99550 1183 aa12.78□□□□□ -0.36
DUSP3-201ENST00000226004 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.37
DUSP3-201ENST00000226004 TOPBP1Q92547 1522 aa12.77□□□□□ -0.37
DUSP3-201ENST00000226004 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
DUSP3-201ENST00000226004 ZNF644Q9H582 1327 aaPredicted RBP12.75□□□□□ -0.37
DUSP3-201ENST00000226004 EIF5BO60841 1220 aaKnown RBP12.75□□□□□ -0.37
DUSP3-201ENST00000226004 ANP32AP39687 249 aaKnown RBP12.73□□□□□ -0.37
DUSP3-201ENST00000226004 DAXXQ9UER7 740 aaPredicted RBP12.73□□□□□ -0.37
DUSP3-201ENST00000226004 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
DUSP3-201ENST00000226004 FGD6Q6ZV73 1430 aa12.72□□□□□ -0.37
DUSP3-201ENST00000226004 TMC1Q8TDI8 760 aa12.72□□□□□ -0.37
DUSP3-201ENST00000226004 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.37
DUSP3-201ENST00000226004 PKD2Q13563 968 aa12.7□□□□□ -0.38
DUSP3-201ENST00000226004 CCDC18Q5T9S5 1454 aa12.7□□□□□ -0.38
DUSP3-201ENST00000226004 CASKIN1Q8WXD9 1431 aa12.69□□□□□ -0.38
DUSP3-201ENST00000226004 TIAM1Q13009 1591 aa12.69□□□□□ -0.38
DUSP3-201ENST00000226004 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
DUSP3-201ENST00000226004 CARD11Q9BXL7 1154 aa12.69□□□□□ -0.38
DUSP3-201ENST00000226004 SENP3Q9H4L4 574 aaPredicted RBP12.68□□□□□ -0.38
DUSP3-201ENST00000226004 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
DUSP3-201ENST00000226004 DEKP35659 375 aaKnown RBP12.67□□□□□ -0.38
DUSP3-201ENST00000226004 DCAF11Q8TEB1 546 aa12.66□□□□□ -0.38
DUSP3-201ENST00000226004 NCOA2Q15596 1464 aa12.66□□□□□ -0.38
DUSP3-201ENST00000226004 HNRNPMP52272 730 aaKnown RBP eCLIP12.65□□□□□ -0.38
DUSP3-201ENST00000226004 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
DUSP3-201ENST00000226004 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
DUSP3-201ENST00000226004 B4GALNT3Q6L9W6 998 aa12.64□□□□□ -0.39
DUSP3-201ENST00000226004 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
DUSP3-201ENST00000226004 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
DUSP3-201ENST00000226004 CCDC136Q96JN2 1154 aa12.64□□□□□ -0.39
DUSP3-201ENST00000226004 ABCA10Q8WWZ4 1543 aa12.63□□□□□ -0.39
DUSP3-201ENST00000226004 FYCO1Q9BQS8 1478 aa12.63□□□□□ -0.39
DUSP3-201ENST00000226004 PCF11O94913 1555 aaKnown RBP12.63□□□□□ -0.39
DUSP3-201ENST00000226004 NUP155O75694 1391 aa12.61□□□□□ -0.39
DUSP3-201ENST00000226004 PPP4R2Q9NY27 417 aa12.61□□□□□ -0.39
DUSP3-201ENST00000226004 WDR97A6NE52 1622 aa12.6□□□□□ -0.39
DUSP3-201ENST00000226004 URB2Q14146 1524 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms