RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 NUP160Q12769 1436 aa39.28■■■■□ 3.88
HOMER3-201ENST00000221222 RAPGEF2Q9Y4G8 1499 aa39.28■■■■□ 3.88
HOMER3-201ENST00000221222 CEP170Q5SW79 1584 aa39.26■■■■□ 3.88
HOMER3-201ENST00000221222 FAM9AQ8IZU1 332 aaPredicted RBP39.23■■■■□ 3.87
HOMER3-201ENST00000221222 TRHP20396 242 aaPredicted RBP39.19■■■■□ 3.86
HOMER3-201ENST00000221222 KIF21BO75037 1637 aa39.08■■■■□ 3.85
HOMER3-201ENST00000221222 KIAA0586Q9BVV6 1533 aa39.03■■■■□ 3.84
HOMER3-201ENST00000221222 ERCC6L2Q5T890 1561 aa39■■■■□ 3.83
HOMER3-201ENST00000221222 SHROOM2Q13796 1616 aa38.96■■■■□ 3.83
HOMER3-201ENST00000221222 CTTNBP2Q8WZ74 1663 aa38.94■■■■□ 3.82
HOMER3-201ENST00000221222 IQGAP2Q13576 1575 aa38.9■■■■□ 3.82
HOMER3-201ENST00000221222 GOLGA3Q08378 1498 aa38.84■■■■□ 3.81
HOMER3-201ENST00000221222 JPH4Q96JJ6 628 aa38.82■■■■□ 3.81
HOMER3-201ENST00000221222 PRG4Q92954 1404 aaPredicted RBP38.73■■■■□ 3.79
HOMER3-201ENST00000221222 UGGT2Q9NYU1 1516 aa38.71■■■■□ 3.79
HOMER3-201ENST00000221222 EHMT2Q96KQ7 1210 aa38.63■■■■□ 3.77
HOMER3-201ENST00000221222 UBTFP17480 764 aaKnown RBP38.62■■■■□ 3.77
HOMER3-201ENST00000221222 DISP1Q96F81 1524 aa38.58■■■■□ 3.77
HOMER3-201ENST00000221222 CARMIL2Q6F5E8 1435 aa38.56■■■■□ 3.76
HOMER3-201ENST00000221222 KIAA0556O60303 1618 aa38.52■■■■□ 3.76
HOMER3-201ENST00000221222 SAMD9Q5K651 1589 aa38.46■■■■□ 3.75
HOMER3-201ENST00000221222 TNIKQ9UKE5 1360 aa38.43■■■■□ 3.74
HOMER3-201ENST00000221222 EFCAB5A4FU69 1503 aa38.38■■■■□ 3.73
HOMER3-201ENST00000221222 LOC105371045A0A1W2PR82 267 aa38.32■■■■□ 3.73
HOMER3-201ENST00000221222 PTPRGP23470 1445 aa38.32■■■■□ 3.73
HOMER3-201ENST00000221222 RANGAP1P46060 587 aaPredicted RBP38.31■■■■□ 3.72
HOMER3-201ENST00000221222 KIF13AQ9H1H9 1805 aa38.25■■■■□ 3.71
HOMER3-201ENST00000221222 ADCY10Q96PN6 1610 aa38.23■■■■□ 3.71
HOMER3-201ENST00000221222 ARHGAP35Q9NRY4 1499 aa38.23■■■■□ 3.71
HOMER3-201ENST00000221222 P3H3Q8IVL6 736 aa38.21■■■■□ 3.71
HOMER3-201ENST00000221222 NPM1P06748 294 aaKnown RBP eCLIP38.2■■■■□ 3.71
HOMER3-201ENST00000221222 TTBK1Q5TCY1 1321 aaPredicted RBP38.19■■■■□ 3.7
HOMER3-201ENST00000221222 FHOD3Q2V2M9 1422 aa38.17■■■■□ 3.7
HOMER3-201ENST00000221222 CLIP1P30622 1438 aa38.14■■■■□ 3.7
HOMER3-201ENST00000221222 CEP162Q5TB80 1403 aa38.1■■■■□ 3.69
HOMER3-201ENST00000221222 UACAQ9BZF9 1416 aa38.1■■■■□ 3.69
HOMER3-201ENST00000221222 MAPKBP1O60336 1514 aa38.08■■■■□ 3.69
HOMER3-201ENST00000221222 FAM69CQ0P6D2 419 aa38.07■■■■□ 3.69
HOMER3-201ENST00000221222 UHRF1BP1LA0JNW5 1464 aa38.07■■■■□ 3.69
HOMER3-201ENST00000221222 ABCA8O94911 1581 aa38.07■■■■□ 3.69
HOMER3-201ENST00000221222 ABCC2Q92887 1545 aa38.06■■■■□ 3.68
HOMER3-201ENST00000221222 ABCC10Q5T3U5 1492 aa38.05■■■■□ 3.68
HOMER3-201ENST00000221222 PLB1Q6P1J6 1458 aa38.05■■■■□ 3.68
HOMER3-201ENST00000221222 DIP2BQ9P265 1576 aa38■■■■□ 3.67
HOMER3-201ENST00000221222 FMN1Q68DA7 1419 aa37.97■■■■□ 3.67
HOMER3-201ENST00000221222 RAPGEF6Q8TEU7 1601 aa37.96■■■■□ 3.67
HOMER3-201ENST00000221222 KDM5BQ9UGL1 1544 aa37.89■■■■□ 3.66
HOMER3-201ENST00000221222 AEBP2Q6ZN18 517 aaPredicted RBP37.88■■■■□ 3.65
HOMER3-201ENST00000221222 TSPOAP1O95153 1857 aa37.85■■■■□ 3.65
HOMER3-201ENST00000221222 ZCCHC11Q5TAX3 1644 aaKnown RBP37.82■■■■□ 3.64
HOMER3-201ENST00000221222 NUP153P49790 1475 aaKnown RBP37.81■■■■□ 3.64
HOMER3-201ENST00000221222 HECW1Q76N89 1606 aa37.76■■■■□ 3.64
HOMER3-201ENST00000221222 PCF11O94913 1555 aaKnown RBP37.75■■■■□ 3.63
HOMER3-201ENST00000221222 CASKIN1Q8WXD9 1431 aa37.74■■■■□ 3.63
HOMER3-201ENST00000221222 ASXL2Q76L83 1435 aa37.73■■■■□ 3.63
HOMER3-201ENST00000221222 ATP10BO94823 1461 aa37.73■■■■□ 3.63
HOMER3-201ENST00000221222 FYCO1Q9BQS8 1478 aa37.7■■■■□ 3.63
HOMER3-201ENST00000221222 KDM6BO15054 1643 aa37.66■■■■□ 3.62
HOMER3-201ENST00000221222 LRRIQ1Q96JM4 1722 aa37.63■■■■□ 3.62
HOMER3-201ENST00000221222 EPRSP07814 1512 aaKnown RBP37.63■■■■□ 3.61
HOMER3-201ENST00000221222 VPS8Q8N3P4 1428 aa37.63■■■■□ 3.61
HOMER3-201ENST00000221222 ARID3CA6NKF2 412 aa37.61■■■■□ 3.61
HOMER3-201ENST00000221222 ATP1B4Q9UN42 357 aaPredicted RBP37.58■■■■□ 3.61
HOMER3-201ENST00000221222 CDK13Q14004 1512 aaKnown RBP37.58■■■■□ 3.61
HOMER3-201ENST00000221222 GLI2P10070 1586 aa37.55■■■■□ 3.6
HOMER3-201ENST00000221222 CCDC18Q5T9S5 1454 aa37.54■■■■□ 3.6
HOMER3-201ENST00000221222 WDR7Q9Y4E6 1490 aa37.54■■■■□ 3.6
HOMER3-201ENST00000221222 PPRC1Q5VV67 1664 aaKnown RBP37.52■■■■□ 3.6
HOMER3-201ENST00000221222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.51■■■■□ 3.59
HOMER3-201ENST00000221222 HNRNPUL2Q1KMD3 747 aaKnown RBP37.51■■■■□ 3.59
HOMER3-201ENST00000221222 PLEKHD1A6NEE1 506 aa37.41■■■■□ 3.58
HOMER3-201ENST00000221222 MAP3K4Q9Y6R4 1608 aa37.39■■■■□ 3.58
HOMER3-201ENST00000221222 CDK11AQ9UQ88 783 aaPredicted RBP37.38■■■■□ 3.57
HOMER3-201ENST00000221222 CFAP43Q8NDM7 1665 aa37.34■■■■□ 3.57
HOMER3-201ENST00000221222 KCNH8Q96L42 1107 aa37.3■■■■□ 3.56
HOMER3-201ENST00000221222 TROQ12816 1431 aaPredicted RBP37.3■■■■□ 3.56
HOMER3-201ENST00000221222 MAGI3Q5TCQ9 1506 aa37.29■■■■□ 3.56
HOMER3-201ENST00000221222 TIAM1Q13009 1591 aa37.28■■■■□ 3.56
HOMER3-201ENST00000221222 MAP3K1Q13233 1512 aa37.28■■■■□ 3.56
HOMER3-201ENST00000221222 ABCA9Q8IUA7 1624 aa37.26■■■■□ 3.55
HOMER3-201ENST00000221222 TEX14Q8IWB6 1497 aa37.25■■■■□ 3.55
HOMER3-201ENST00000221222 COL17A1Q9UMD9 1497 aaPredicted RBP37.24■■■■□ 3.55
HOMER3-201ENST00000221222 KDM4FA0A1W2PPD8 638 aa37.21■■■■□ 3.55
HOMER3-201ENST00000221222 KIF14Q15058 1648 aa37.2■■■■□ 3.55
HOMER3-201ENST00000221222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.18■■■■□ 3.54
HOMER3-201ENST00000221222 EHBP1L1Q8N3D4 1523 aa37.17■■■■□ 3.54
HOMER3-201ENST00000221222 MTUS2Q5JR59 1369 aa37.15■■■■□ 3.54
HOMER3-201ENST00000221222 CD109Q6YHK3 1445 aa37.14■■■■□ 3.54
HOMER3-201ENST00000221222 TTC37Q6PGP7 1564 aa37.13■■■■□ 3.54
HOMER3-201ENST00000221222 APLP2Q06481 763 aa37.11■■■■□ 3.53
HOMER3-201ENST00000221222 LRRC9Q6ZRR7 1453 aa37.1■■■■□ 3.53
HOMER3-201ENST00000221222 MYO5CQ9NQX4 1742 aa37.01■■■■□ 3.52
HOMER3-201ENST00000221222 KANK4Q5T7N3 995 aaPredicted RBP37.01■■■■□ 3.51
HOMER3-201ENST00000221222 SUPT6HQ7KZ85 1726 aaKnown RBP37■■■■□ 3.51
HOMER3-201ENST00000221222 ADGRL1O94910 1474 aa36.97■■■■□ 3.51
HOMER3-201ENST00000221222 ARAP3Q8WWN8 1544 aa36.96■■■■□ 3.51
HOMER3-201ENST00000221222 PLCH2O75038 1416 aa36.95■■■■□ 3.5
HOMER3-201ENST00000221222 CDC42BPAQ5VT25 1732 aa36.93■■■■□ 3.5
HOMER3-201ENST00000221222 PREX2Q70Z35 1606 aa36.92■■■■□ 3.5
HOMER3-201ENST00000221222 NCOA2Q15596 1464 aa36.91■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms