RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 PPP6R1Q9UPN7 881 aa8.34□□□□□ -1.07
CEACAM1-201ENST00000161559 P3H3Q8IVL6 736 aa8.34□□□□□ -1.07
CEACAM1-201ENST00000161559 PRXQ9BXM0 1461 aa8.34□□□□□ -1.08
CEACAM1-201ENST00000161559 TOP2BQ02880 1626 aa8.34□□□□□ -1.08
CEACAM1-201ENST00000161559 ARHGAP35Q9NRY4 1499 aa8.33□□□□□ -1.08
CEACAM1-201ENST00000161559 FAM50AQ14320 339 aaKnown RBP8.33□□□□□ -1.08
CEACAM1-201ENST00000161559 DNAJC5BQ9UF47 199 aa8.33□□□□□ -1.08
CEACAM1-201ENST00000161559 ATP1B4Q9UN42 357 aaPredicted RBP8.32□□□□□ -1.08
CEACAM1-201ENST00000161559 PPP1R15AO75807 674 aaPredicted RBP8.31□□□□□ -1.08
CEACAM1-201ENST00000161559 PEG3Q9GZU2 1588 aa8.31□□□□□ -1.08
CEACAM1-201ENST00000161559 PHLDB1Q86UU1 1377 aa8.3□□□□□ -1.08
CEACAM1-201ENST00000161559 CUX1P39880 1505 aa8.3□□□□□ -1.08
CEACAM1-201ENST00000161559 CUX2O14529 1486 aa8.29□□□□□ -1.08
CEACAM1-201ENST00000161559 PIAS4Q8N2W9 510 aaPredicted RBP8.29□□□□□ -1.08
CEACAM1-201ENST00000161559 BIVM-ERCC5R4GMW8 1640 aa8.27□□□□□ -1.09
CEACAM1-201ENST00000161559 ERICH3Q5RHP9 1530 aa8.27□□□□□ -1.09
CEACAM1-201ENST00000161559 SENP3-EIF4A1A0A087X0R7 540 aa8.26□□□□□ -1.09
CEACAM1-201ENST00000161559 SETD5Q9C0A6 1442 aa8.25□□□□□ -1.09
CEACAM1-201ENST00000161559 NEFLP07196 543 aa8.24□□□□□ -1.09
CEACAM1-201ENST00000161559 CCDC184Q52MB2 194 aa8.24□□□□□ -1.09
CEACAM1-201ENST00000161559 TIAM1Q13009 1591 aa8.23□□□□□ -1.09
CEACAM1-201ENST00000161559 KIF27Q86VH2 1401 aa8.23□□□□□ -1.09
CEACAM1-201ENST00000161559 ANP32CO43423 234 aa8.23□□□□□ -1.09
CEACAM1-201ENST00000161559 HNRNPUQ00839 825 aaKnown RBP eCLIP8.23□□□□□ -1.09
CEACAM1-201ENST00000161559 CNGB1Q14028 1251 aaPredicted RBP8.21□□□□□ -1.1
CEACAM1-201ENST00000161559 LRRC9Q6ZRR7 1453 aa8.21□□□□□ -1.1
CEACAM1-201ENST00000161559 CC2D2AQ9P2K1 1620 aa8.19□□□□□ -1.1
CEACAM1-201ENST00000161559 IGF1RP08069 1367 aa8.19□□□□□ -1.1
CEACAM1-201ENST00000161559 ERCC6Q03468 1493 aa8.19□□□□□ -1.1
CEACAM1-201ENST00000161559 FHOD3Q2V2M9 1422 aa8.18□□□□□ -1.1
CEACAM1-201ENST00000161559 PCF11O94913 1555 aaKnown RBP8.18□□□□□ -1.1
CEACAM1-201ENST00000161559 NCAPD3P42695 1498 aa8.17□□□□□ -1.1
CEACAM1-201ENST00000161559 PTPRKQ15262 1439 aa8.17□□□□□ -1.1
CEACAM1-201ENST00000161559 B4GALNT3Q6L9W6 998 aa8.17□□□□□ -1.1
CEACAM1-201ENST00000161559 AQRO60306 1485 aaKnown RBP eCLIP8.17□□□□□ -1.18e-7■■□□□ 12.2
CEACAM1-201ENST00000161559 CCER2I3L3R5 266 aa8.16□□□□□ -1.1
CEACAM1-201ENST00000161559 TONSLQ96HA7 1378 aa8.15□□□□□ -1.1
CEACAM1-201ENST00000161559 WASHC2AQ641Q2 1341 aa8.15□□□□□ -1.11
CEACAM1-201ENST00000161559 C11orf95C9JLR9 678 aaPredicted RBP8.15□□□□□ -1.11
CEACAM1-201ENST00000161559 CARMIL1Q5VZK9 1371 aa8.14□□□□□ -1.11
CEACAM1-201ENST00000161559 FAM9BQ8IZU0 186 aa8.14□□□□□ -1.11
CEACAM1-201ENST00000161559 CHIC2Q9UKJ5 165 aa8.13□□□□□ -1.11
CEACAM1-201ENST00000161559 NBR1Q14596 966 aa8.13□□□□□ -1.11
CEACAM1-201ENST00000161559 PAK3O75914 559 aaPredicted RBP8.12□□□□□ -1.11
CEACAM1-201ENST00000161559 RRP7BPQ9NSQ0 103 aa8.12□□□□□ -1.11
CEACAM1-201ENST00000161559 CDK11AQ9UQ88 783 aaPredicted RBP8.12□□□□□ -1.11
CEACAM1-201ENST00000161559 KDM5BQ9UGL1 1544 aa8.12□□□□□ -1.11
CEACAM1-201ENST00000161559 ARID3CA6NKF2 412 aa8.12□□□□□ -1.11
CEACAM1-201ENST00000161559 HSPA5P11021 654 aaKnown RBP8.12□□□□□ -1.11
CEACAM1-201ENST00000161559 CCDC18Q5T9S5 1454 aa8.12□□□□□ -1.11
CEACAM1-201ENST00000161559 PDS5BQ9NTI5 1447 aa8.11□□□□□ -1.11
CEACAM1-201ENST00000161559 FBLN2P98095 1184 aa8.11□□□□□ -1.11
CEACAM1-201ENST00000161559 CADPSQ9ULU8 1353 aa8.11□□□□□ -1.11
CEACAM1-201ENST00000161559 CFAP43Q8NDM7 1665 aa8.11□□□□□ -1.11
CEACAM1-201ENST00000161559 FGD5Q6ZNL6 1462 aa8.11□□□□□ -1.11
CEACAM1-201ENST00000161559 CFTRP13569 1480 aa8.1□□□□□ -1.11
CEACAM1-201ENST00000161559 ERICH6Q7L0X2 663 aa8.1□□□□□ -1.11
CEACAM1-201ENST00000161559 FANCIQ9NVI1 1328 aa8.09□□□□□ -1.11
CEACAM1-201ENST00000161559 RAD54L2Q9Y4B4 1467 aa8.09□□□□□ -1.11
CEACAM1-201ENST00000161559 DEKP35659 375 aaKnown RBP8.08□□□□□ -1.12
CEACAM1-201ENST00000161559 FGD6Q6ZV73 1430 aa8.08□□□□□ -1.12
CEACAM1-201ENST00000161559 KDM6BO15054 1643 aa8.08□□□□□ -1.12
CEACAM1-201ENST00000161559 LRRIQ1Q96JM4 1722 aa8.08□□□□□ -1.12
CEACAM1-201ENST00000161559 DENND4BO75064 1496 aaPredicted RBP8.07□□□□□ -1.12
CEACAM1-201ENST00000161559 PTPN23Q9H3S7 1636 aa8.07□□□□□ -1.12
CEACAM1-201ENST00000161559 MAP3K1Q13233 1512 aa8.07□□□□□ -1.12
CEACAM1-201ENST00000161559 AKNAQ7Z591 1439 aa8.06□□□□□ -1.12
CEACAM1-201ENST00000161559 NAIPQ13075 1403 aa8.06□□□□□ -1.12
CEACAM1-201ENST00000161559 MRS2Q9HD23 443 aa8.06□□□□□ -1.12
CEACAM1-201ENST00000161559 FHAD1B1AJZ9 1412 aa8.05□□□□□ -1.12
CEACAM1-201ENST00000161559 UACAQ9BZF9 1416 aa8.05□□□□□ -1.12
CEACAM1-201ENST00000161559 POLR3GLQ9BT43 218 aa8.04□□□□□ -1.12
CEACAM1-201ENST00000161559 PPP4R2Q9NY27 417 aa8.04□□□□□ -1.12
CEACAM1-201ENST00000161559 TIMELESSQ9UNS1 1208 aa8.04□□□□□ -1.12
CEACAM1-201ENST00000161559 HMGXB3Q12766 1538 aa8.04□□□□□ -1.12
CEACAM1-201ENST00000161559 MTUS2Q5JR59 1369 aa8.04□□□□□ -1.12
CEACAM1-201ENST00000161559 L3MBTL2Q969R5 705 aa8.04□□□□□ -1.12
CEACAM1-201ENST00000161559 NBPF8Q3BBV2 869 aa8.04□□□□□ -1.12
CEACAM1-201ENST00000161559 PRKRIP1Q9H875 184 aaPredicted RBP8.04□□□□□ -1.12
CEACAM1-201ENST00000161559 HFM1A2PYH4 1435 aa8.04□□□□□ -1.12
CEACAM1-201ENST00000161559 FYCO1Q9BQS8 1478 aa8.02□□□□□ -1.13
CEACAM1-201ENST00000161559 CASKIN1Q8WXD9 1431 aa8.02□□□□□ -1.13
CEACAM1-201ENST00000161559 SNAPC4Q5SXM2 1469 aa8.02□□□□□ -1.13
CEACAM1-201ENST00000161559 NCOA2Q15596 1464 aa8.01□□□□□ -1.13
CEACAM1-201ENST00000161559 MAGI3Q5TCQ9 1506 aa8.01□□□□□ -1.13
CEACAM1-201ENST00000161559 EIF4G2P78344 907 aaKnown RBP eCLIP8.01□□□□□ -1.13
CEACAM1-201ENST00000161559 CNTLNQ9NXG0 1405 aa8.01□□□□□ -1.13
CEACAM1-201ENST00000161559 SKAP1Q86WV1 359 aa8□□□□□ -1.13
CEACAM1-201ENST00000161559 RTN4Q9NQC3 1192 aaKnown RBP8□□□□□ -1.13
CEACAM1-201ENST00000161559 NOP58Q9Y2X3 529 aaKnown RBP8□□□□□ -1.13
CEACAM1-201ENST00000161559 ANO8Q9HCE9 1232 aaPredicted RBP7.99□□□□□ -1.13
CEACAM1-201ENST00000161559 NESP48681 1621 aa7.99□□□□□ -1.13
CEACAM1-201ENST00000161559 ZNF326Q5BKZ1 582 aaKnown RBP7.99□□□□□ -1.13
CEACAM1-201ENST00000161559 CCDC7Q96M83 1385 aa7.99□□□□□ -1.13
CEACAM1-201ENST00000161559 KIF7Q2M1P5 1343 aa7.99□□□□□ -1.13
CEACAM1-201ENST00000161559 MPHOSPH9Q99550 1183 aa7.98□□□□□ -1.13
CEACAM1-201ENST00000161559 SALL2Q9Y467 1007 aaPredicted RBP7.98□□□□□ -1.13
CEACAM1-201ENST00000161559 FANCD2Q9BXW9 1451 aa7.98□□□□□ -1.13
CEACAM1-201ENST00000161559 TDRD9Q8NDG6 1382 aaKnown RBP7.98□□□□□ -1.13
CEACAM1-201ENST00000161559 MYOM3Q5VTT5 1437 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms