RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ATAD2BQ9ULI0 1458 aa28.11■■■□□ 2.09
PPP1R3F-201ENST00000055335 CDK11AQ9UQ88 783 aaPredicted RBP28.11■■■□□ 2.09
PPP1R3F-201ENST00000055335 PRXQ9BXM0 1461 aa28.1■■■□□ 2.09
PPP1R3F-201ENST00000055335 MAPKBP1O60336 1514 aa28.08■■■□□ 2.09
PPP1R3F-201ENST00000055335 CCER2I3L3R5 266 aa28.04■■■□□ 2.08
PPP1R3F-201ENST00000055335 KIF27Q86VH2 1401 aa28.03■■■□□ 2.08
PPP1R3F-201ENST00000055335 ARHGAP35Q9NRY4 1499 aa28.02■■■□□ 2.08
PPP1R3F-201ENST00000055335 TOP2BQ02880 1626 aa27.98■■■□□ 2.07
PPP1R3F-201ENST00000055335 CNGB1Q14028 1251 aaPredicted RBP27.98■■■□□ 2.07
PPP1R3F-201ENST00000055335 PHLDB1Q86UU1 1377 aa27.98■■■□□ 2.07
PPP1R3F-201ENST00000055335 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
PPP1R3F-201ENST00000055335 CUX2O14529 1486 aa27.97■■■□□ 2.07
PPP1R3F-201ENST00000055335 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.07
PPP1R3F-201ENST00000055335 BICRAQ9NZM4 1560 aa27.89■■■□□ 2.06
PPP1R3F-201ENST00000055335 FAM9BQ8IZU0 186 aa27.86■■■□□ 2.05
PPP1R3F-201ENST00000055335 B4GALNT3Q6L9W6 998 aa27.85■■■□□ 2.05
PPP1R3F-201ENST00000055335 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
PPP1R3F-201ENST00000055335 NBR1Q14596 966 aa27.81■■■□□ 2.04
PPP1R3F-201ENST00000055335 SENP3-EIF4A1A0A087X0R7 540 aa27.79■■■□□ 2.04
PPP1R3F-201ENST00000055335 TIMELESSQ9UNS1 1208 aa27.78■■■□□ 2.04
PPP1R3F-201ENST00000055335 CUX1P39880 1505 aa27.77■■■□□ 2.04
PPP1R3F-201ENST00000055335 FANCIQ9NVI1 1328 aa27.75■■■□□ 2.03
PPP1R3F-201ENST00000055335 LRRC9Q6ZRR7 1453 aa27.75■■■□□ 2.03
PPP1R3F-201ENST00000055335 CCDC184Q52MB2 194 aa27.73■■■□□ 2.03
PPP1R3F-201ENST00000055335 CARMIL1Q5VZK9 1371 aa27.7■■■□□ 2.03
PPP1R3F-201ENST00000055335 TIAM1Q13009 1591 aa27.69■■■□□ 2.02
PPP1R3F-201ENST00000055335 IGF1RP08069 1367 aa27.69■■■□□ 2.02
PPP1R3F-201ENST00000055335 DEKP35659 375 aaKnown RBP27.69■■■□□ 2.02
PPP1R3F-201ENST00000055335 CHIC2Q9UKJ5 165 aa27.68■■■□□ 2.02
PPP1R3F-201ENST00000055335 PPP4R2Q9NY27 417 aa27.68■■■□□ 2.02
PPP1R3F-201ENST00000055335 BIVM-ERCC5R4GMW8 1640 aa27.66■■■□□ 2.02
PPP1R3F-201ENST00000055335 HSPA5P11021 654 aaKnown RBP27.66■■■□□ 2.02
PPP1R3F-201ENST00000055335 MRS2Q9HD23 443 aa27.64■■■□□ 2.01
PPP1R3F-201ENST00000055335 POLR3GLQ9BT43 218 aa27.63■■■□□ 2.01
PPP1R3F-201ENST00000055335 RRP7BPQ9NSQ0 103 aa27.63■■■□□ 2.01
PPP1R3F-201ENST00000055335 FHOD3Q2V2M9 1422 aa27.61■■■□□ 2.01
PPP1R3F-201ENST00000055335 WASHC2AQ641Q2 1341 aa27.59■■■□□ 2.01
PPP1R3F-201ENST00000055335 FHAD1B1AJZ9 1412 aa27.54■■■□□ 2
PPP1R3F-201ENST00000055335 FOXD1Q16676 465 aa27.53■■■□□ 2
PPP1R3F-201ENST00000055335 EIF4G2P78344 907 aaKnown RBP eCLIP27.52■■■□□ 26e-6■■■■□ 25.1
PPP1R3F-201ENST00000055335 MTUS2Q5JR59 1369 aa27.51■■□□□ 1.99
PPP1R3F-201ENST00000055335 PAK3O75914 559 aaPredicted RBP27.5■■□□□ 1.99
PPP1R3F-201ENST00000055335 CCDC18Q5T9S5 1454 aa27.49■■□□□ 1.99
PPP1R3F-201ENST00000055335 ARID3CA6NKF2 412 aa27.48■■□□□ 1.99
PPP1R3F-201ENST00000055335 NOP58Q9Y2X3 529 aaKnown RBP27.48■■□□□ 1.99
PPP1R3F-201ENST00000055335 C11orf95C9JLR9 678 aaPredicted RBP27.43■■□□□ 1.98
PPP1R3F-201ENST00000055335 PRKRIP1Q9H875 184 aaPredicted RBP27.41■■□□□ 1.98
PPP1R3F-201ENST00000055335 PCF11O94913 1555 aaKnown RBP27.4■■□□□ 1.98
PPP1R3F-201ENST00000055335 CCDC136Q96JN2 1154 aa27.39■■□□□ 1.98
PPP1R3F-201ENST00000055335 PTPRKQ15262 1439 aa27.39■■□□□ 1.98
PPP1R3F-201ENST00000055335 FGD6Q6ZV73 1430 aa27.37■■□□□ 1.97
PPP1R3F-201ENST00000055335 NPM2Q86SE8 214 aaKnown RBP27.37■■□□□ 1.97
PPP1R3F-201ENST00000055335 MAP3K1Q13233 1512 aa27.37■■□□□ 1.97
PPP1R3F-201ENST00000055335 RTL5Q5HYW3 569 aaPredicted RBP27.36■■□□□ 1.97
PPP1R3F-201ENST00000055335 UACAQ9BZF9 1416 aa27.36■■□□□ 1.97
PPP1R3F-201ENST00000055335 L3MBTL2Q969R5 705 aa27.36■■□□□ 1.97
PPP1R3F-201ENST00000055335 ERICH6BQ5W0A0 696 aa27.35■■□□□ 1.97
PPP1R3F-201ENST00000055335 AQRO60306 1485 aaKnown RBP eCLIP27.35■■□□□ 1.97
PPP1R3F-201ENST00000055335 ZNF326Q5BKZ1 582 aaKnown RBP27.34■■□□□ 1.97
PPP1R3F-201ENST00000055335 ANP32AP39687 249 aaKnown RBP27.33■■□□□ 1.97
PPP1R3F-201ENST00000055335 MYT1LQ9UL68 1186 aa27.33■■□□□ 1.97
PPP1R3F-201ENST00000055335 CFTRP13569 1480 aa27.32■■□□□ 1.96
PPP1R3F-201ENST00000055335 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
PPP1R3F-201ENST00000055335 ZBTB47Q9UFB7 747 aaPredicted RBP27.28■■□□□ 1.96
PPP1R3F-201ENST00000055335 ZBED9Q6R2W3 1325 aa27.27■■□□□ 1.96
PPP1R3F-201ENST00000055335 RTN4Q9NQC3 1192 aaKnown RBP27.26■■□□□ 1.95
PPP1R3F-201ENST00000055335 HFM1A2PYH4 1435 aa27.25■■□□□ 1.95
PPP1R3F-201ENST00000055335 AKNAQ7Z591 1439 aa27.25■■□□□ 1.95
PPP1R3F-201ENST00000055335 NAIPQ13075 1403 aa27.24■■□□□ 1.95
PPP1R3F-201ENST00000055335 SALL2Q9Y467 1007 aaPredicted RBP27.24■■□□□ 1.95
PPP1R3F-201ENST00000055335 NCAPD3P42695 1498 aa27.23■■□□□ 1.95
PPP1R3F-201ENST00000055335 CNTLNQ9NXG0 1405 aa27.23■■□□□ 1.95
PPP1R3F-201ENST00000055335 MPHOSPH9Q99550 1183 aa27.22■■□□□ 1.95
PPP1R3F-201ENST00000055335 FMN1Q68DA7 1419 aa27.22■■□□□ 1.95
PPP1R3F-201ENST00000055335 CCDC7Q96M83 1385 aa27.19■■□□□ 1.94
PPP1R3F-201ENST00000055335 CASKIN1Q8WXD9 1431 aa27.19■■□□□ 1.94
PPP1R3F-201ENST00000055335 NBPF8Q3BBV2 869 aa27.17■■□□□ 1.94
PPP1R3F-201ENST00000055335 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
PPP1R3F-201ENST00000055335 IPO9Q96P70 1041 aaKnown RBP27.16■■□□□ 1.94
PPP1R3F-201ENST00000055335 ANO8Q9HCE9 1232 aaPredicted RBP27.15■■□□□ 1.94
PPP1R3F-201ENST00000055335 FYCO1Q9BQS8 1478 aa27.15■■□□□ 1.94
PPP1R3F-201ENST00000055335 LAS1LQ9Y4W2 734 aaKnown RBP27.15■■□□□ 1.94
PPP1R3F-201ENST00000055335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.14■■□□□ 1.94
PPP1R3F-201ENST00000055335 KIF7Q2M1P5 1343 aa27.13■■□□□ 1.93
PPP1R3F-201ENST00000055335 PTPN23Q9H3S7 1636 aa27.13■■□□□ 1.93
PPP1R3F-201ENST00000055335 CFAP43Q8NDM7 1665 aa27.12■■□□□ 1.93
PPP1R3F-201ENST00000055335 NCOA2Q15596 1464 aa27.09■■□□□ 1.93
PPP1R3F-201ENST00000055335 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
PPP1R3F-201ENST00000055335 NUDCQ9Y266 331 aa27.08■■□□□ 1.93
PPP1R3F-201ENST00000055335 SLC4A1APQ9BWU0 796 aaKnown RBP27.07■■□□□ 1.92
PPP1R3F-201ENST00000055335 MYOM3Q5VTT5 1437 aa27.07■■□□□ 1.92
PPP1R3F-201ENST00000055335 IL27Q8NEV9 243 aa27.06■■□□□ 1.92
PPP1R3F-201ENST00000055335 TMC1Q8TDI8 760 aa27.06■■□□□ 1.92
PPP1R3F-201ENST00000055335 HMGXB3Q12766 1538 aa27.04■■□□□ 1.92
PPP1R3F-201ENST00000055335 PRKCSHP14314 528 aaPredicted RBP27.03■■□□□ 1.92
PPP1R3F-201ENST00000055335 KDM5BQ9UGL1 1544 aa27.02■■□□□ 1.92
PPP1R3F-201ENST00000055335 NCOA1Q15788 1441 aa26.99■■□□□ 1.91
PPP1R3F-201ENST00000055335 NEFMP07197 916 aa26.98■■□□□ 1.91
PPP1R3F-201ENST00000055335 TDRD9Q8NDG6 1382 aaKnown RBP26.97■■□□□ 1.91
PPP1R3F-201ENST00000055335 EXOC6Q8TAG9 804 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms