RNA–Protein interactions for RNA: ENST00000013070.10

UBR7-201, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR7, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-201ENST00000013070 SETD5Q9C0A6 1442 aa18.17■□□□□ 0.5
UBR7-201ENST00000013070 ARID3CA6NKF2 412 aa18.16■□□□□ 0.5
UBR7-201ENST00000013070 HNRNPUQ00839 825 aaKnown RBP eCLIP18.14■□□□□ 0.49
UBR7-201ENST00000013070 TONSLQ96HA7 1378 aa18.13■□□□□ 0.49
UBR7-201ENST00000013070 PHLDB1Q86UU1 1377 aa18.13■□□□□ 0.49
UBR7-201ENST00000013070 CARMIL1Q5VZK9 1371 aa18.13■□□□□ 0.49
UBR7-201ENST00000013070 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
UBR7-201ENST00000013070 CUX1P39880 1505 aa18.11■□□□□ 0.49
UBR7-201ENST00000013070 CHIC2Q9UKJ5 165 aa18.11■□□□□ 0.49
UBR7-201ENST00000013070 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
UBR7-201ENST00000013070 IGF1RP08069 1367 aa18.08■□□□□ 0.48
UBR7-201ENST00000013070 RBM19Q9Y4C8 960 aaKnown RBP18.08■□□□□ 0.48
UBR7-201ENST00000013070 PPP1R15AO75807 674 aaPredicted RBP18.07■□□□□ 0.48
UBR7-201ENST00000013070 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
UBR7-201ENST00000013070 POLR3GLQ9BT43 218 aa18.05■□□□□ 0.48
UBR7-201ENST00000013070 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
UBR7-201ENST00000013070 RRP7BPQ9NSQ0 103 aa18.04■□□□□ 0.48
UBR7-201ENST00000013070 SENP3-EIF4A1A0A087X0R7 540 aa18.03■□□□□ 0.48
UBR7-201ENST00000013070 FHOD3Q2V2M9 1422 aa18.03■□□□□ 0.48
UBR7-201ENST00000013070 MAPKBP1O60336 1514 aa18■□□□□ 0.47
UBR7-201ENST00000013070 FAM9BQ8IZU0 186 aa17.99■□□□□ 0.47
UBR7-201ENST00000013070 MTUS2Q5JR59 1369 aa17.98■□□□□ 0.47
UBR7-201ENST00000013070 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
UBR7-201ENST00000013070 CDK11AQ9UQ88 783 aaPredicted RBP17.95■□□□□ 0.46
UBR7-201ENST00000013070 BIVM-ERCC5R4GMW8 1640 aa17.93■□□□□ 0.46
UBR7-201ENST00000013070 CCER2I3L3R5 266 aa17.93■□□□□ 0.46
UBR7-201ENST00000013070 FOXD1Q16676 465 aa17.93■□□□□ 0.46
UBR7-201ENST00000013070 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
UBR7-201ENST00000013070 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
UBR7-201ENST00000013070 CFTRP13569 1480 aa17.9■□□□□ 0.46
UBR7-201ENST00000013070 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
UBR7-201ENST00000013070 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
UBR7-201ENST00000013070 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
UBR7-201ENST00000013070 BCL11AQ9H165 835 aa17.87■□□□□ 0.45
UBR7-201ENST00000013070 TIMELESSQ9UNS1 1208 aa17.87■□□□□ 0.45
UBR7-201ENST00000013070 HSPA5P11021 654 aaKnown RBP17.86■□□□□ 0.45
UBR7-201ENST00000013070 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
UBR7-201ENST00000013070 RAD54L2Q9Y4B4 1467 aa17.84■□□□□ 0.45
UBR7-201ENST00000013070 MRS2Q9HD23 443 aa17.84■□□□□ 0.45
UBR7-201ENST00000013070 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.45
UBR7-201ENST00000013070 CCDC184Q52MB2 194 aa17.82■□□□□ 0.44
UBR7-201ENST00000013070 EIF4G2P78344 907 aaKnown RBP eCLIP17.81■□□□□ 0.44
UBR7-201ENST00000013070 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
UBR7-201ENST00000013070 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
UBR7-201ENST00000013070 MSH5O43196 834 aa17.77■□□□□ 0.43
UBR7-201ENST00000013070 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
UBR7-201ENST00000013070 WASHC2AQ641Q2 1341 aa17.76■□□□□ 0.43
UBR7-201ENST00000013070 FGD6Q6ZV73 1430 aa17.75■□□□□ 0.43
UBR7-201ENST00000013070 L3MBTL2Q969R5 705 aa17.73■□□□□ 0.43
UBR7-201ENST00000013070 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
UBR7-201ENST00000013070 PTPRKQ15262 1439 aa17.71■□□□□ 0.43
UBR7-201ENST00000013070 NBR1Q14596 966 aa17.7■□□□□ 0.42
UBR7-201ENST00000013070 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
UBR7-201ENST00000013070 ZNF777Q9ULD5 760 aaPredicted RBP17.68■□□□□ 0.42
UBR7-201ENST00000013070 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
UBR7-201ENST00000013070 MPHOSPH9Q99550 1183 aa17.68■□□□□ 0.42
UBR7-201ENST00000013070 C11orf95C9JLR9 678 aaPredicted RBP17.67■□□□□ 0.42
UBR7-201ENST00000013070 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
UBR7-201ENST00000013070 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
UBR7-201ENST00000013070 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
UBR7-201ENST00000013070 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
UBR7-201ENST00000013070 CASKIN1Q8WXD9 1431 aa17.66■□□□□ 0.42
UBR7-201ENST00000013070 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.42
UBR7-201ENST00000013070 MAP3K1Q13233 1512 aa17.64■□□□□ 0.41
UBR7-201ENST00000013070 PRKRIP1Q9H875 184 aaPredicted RBP17.63■□□□□ 0.41
UBR7-201ENST00000013070 NESP48681 1621 aa17.62■□□□□ 0.41
UBR7-201ENST00000013070 NAIPQ13075 1403 aa17.62■□□□□ 0.41
UBR7-201ENST00000013070 FYCO1Q9BQS8 1478 aa17.62■□□□□ 0.41
UBR7-201ENST00000013070 NCOA2Q15596 1464 aa17.61■□□□□ 0.41
UBR7-201ENST00000013070 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
UBR7-201ENST00000013070 CCDC136Q96JN2 1154 aa17.58■□□□□ 0.41
UBR7-201ENST00000013070 MYOM3Q5VTT5 1437 aa17.58■□□□□ 0.4
UBR7-201ENST00000013070 NBPF8Q3BBV2 869 aa17.57■□□□□ 0.4
UBR7-201ENST00000013070 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
UBR7-201ENST00000013070 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
UBR7-201ENST00000013070 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
UBR7-201ENST00000013070 ZNF644Q9H582 1327 aaPredicted RBP17.56■□□□□ 0.4
UBR7-201ENST00000013070 TMC1Q8TDI8 760 aa17.52■□□□□ 0.4
UBR7-201ENST00000013070 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.39
UBR7-201ENST00000013070 FBLN2P98095 1184 aa17.51■□□□□ 0.39
UBR7-201ENST00000013070 KIF7Q2M1P5 1343 aa17.51■□□□□ 0.39
UBR7-201ENST00000013070 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
UBR7-201ENST00000013070 CCDC7Q96M83 1385 aa17.5■□□□□ 0.39
UBR7-201ENST00000013070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.5■□□□□ 0.39
UBR7-201ENST00000013070 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
UBR7-201ENST00000013070 PTPN23Q9H3S7 1636 aa17.49■□□□□ 0.39
UBR7-201ENST00000013070 CNTLNQ9NXG0 1405 aa17.48■□□□□ 0.39
UBR7-201ENST00000013070 CFAP43Q8NDM7 1665 aa17.47■□□□□ 0.39
UBR7-201ENST00000013070 DEKP35659 375 aaKnown RBP17.46■□□□□ 0.39
UBR7-201ENST00000013070 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.39
UBR7-201ENST00000013070 ANP32AP39687 249 aaKnown RBP17.45■□□□□ 0.38
UBR7-201ENST00000013070 EFCAB5A4FU69 1503 aa17.45■□□□□ 0.38
UBR7-201ENST00000013070 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
UBR7-201ENST00000013070 AKNAQ7Z591 1439 aa17.44■□□□□ 0.38
UBR7-201ENST00000013070 ABCA10Q8WWZ4 1543 aa17.44■□□□□ 0.38
UBR7-201ENST00000013070 PAK3O75914 559 aaPredicted RBP17.44■□□□□ 0.38
UBR7-201ENST00000013070 RTL5Q5HYW3 569 aaPredicted RBP17.43■□□□□ 0.38
UBR7-201ENST00000013070 GAPVD1Q14C86 1478 aa17.42■□□□□ 0.38
UBR7-201ENST00000013070 CFDP1Q9UEE9 299 aaPredicted RBP17.42■□□□□ 0.38
UBR7-201ENST00000013070 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms