RNA–Protein interactions for RNA: ENST00000013070.10

UBR7-201, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR7, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-201ENST00000013070 NISCHQ9Y2I1 1504 aa24.91■■□□□ 1.58
UBR7-201ENST00000013070 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
UBR7-201ENST00000013070 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
UBR7-201ENST00000013070 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
UBR7-201ENST00000013070 PCGF6Q9BYE7 350 aa21.49■■□□□ 1.03
UBR7-201ENST00000013070 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
UBR7-201ENST00000013070 HRCP23327 699 aa21.29■■□□□ 1
UBR7-201ENST00000013070 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
UBR7-201ENST00000013070 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
UBR7-201ENST00000013070 LOC105371045A0A1W2PR82 267 aa21.12■□□□□ 0.97
UBR7-201ENST00000013070 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.95
UBR7-201ENST00000013070 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
UBR7-201ENST00000013070 FAM9AQ8IZU1 332 aaPredicted RBP20.81■□□□□ 0.92
UBR7-201ENST00000013070 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
UBR7-201ENST00000013070 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
UBR7-201ENST00000013070 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
UBR7-201ENST00000013070 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
UBR7-201ENST00000013070 TTBK1Q5TCY1 1321 aaPredicted RBP20.32■□□□□ 0.84
UBR7-201ENST00000013070 ZEB1P37275 1124 aaPredicted RBP20.2■□□□□ 0.82
UBR7-201ENST00000013070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
UBR7-201ENST00000013070 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
UBR7-201ENST00000013070 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
UBR7-201ENST00000013070 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
UBR7-201ENST00000013070 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
UBR7-201ENST00000013070 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
UBR7-201ENST00000013070 ABCC9O60706 1549 aa19.84■□□□□ 0.77
UBR7-201ENST00000013070 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
UBR7-201ENST00000013070 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
UBR7-201ENST00000013070 UBTFP17480 764 aaKnown RBP19.7■□□□□ 0.74
UBR7-201ENST00000013070 YTHDC1Q96MU7 727 aaKnown RBP19.7■□□□□ 0.74
UBR7-201ENST00000013070 DIEXFQ68CQ4 756 aaKnown RBP19.69■□□□□ 0.74
UBR7-201ENST00000013070 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
UBR7-201ENST00000013070 NEUROD1Q13562 356 aa19.67■□□□□ 0.74
UBR7-201ENST00000013070 GTF3C3Q9Y5Q9 886 aa19.62■□□□□ 0.73
UBR7-201ENST00000013070 ACIN1Q9UKV3 1341 aaKnown RBP19.61■□□□□ 0.73
UBR7-201ENST00000013070 CENPBP07199 599 aaPredicted RBP19.59■□□□□ 0.73
UBR7-201ENST00000013070 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
UBR7-201ENST00000013070 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
UBR7-201ENST00000013070 WIZO95785 1651 aa19.42■□□□□ 0.7
UBR7-201ENST00000013070 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
UBR7-201ENST00000013070 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
UBR7-201ENST00000013070 APLP2Q06481 763 aa19.33■□□□□ 0.69
UBR7-201ENST00000013070 ABCC8Q09428 1581 aa19.33■□□□□ 0.69
UBR7-201ENST00000013070 CEP162Q5TB80 1403 aa19.31■□□□□ 0.68
UBR7-201ENST00000013070 ZNF316A6NFI3 1004 aaPredicted RBP19.31■□□□□ 0.68
UBR7-201ENST00000013070 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
UBR7-201ENST00000013070 SOGA1O94964 1423 aa19.31■□□□□ 0.68
UBR7-201ENST00000013070 MIER1Q8N108 512 aa19.21■□□□□ 0.67
UBR7-201ENST00000013070 NACADO15069 1562 aa19.19■□□□□ 0.66
UBR7-201ENST00000013070 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
UBR7-201ENST00000013070 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
UBR7-201ENST00000013070 BAZ1AQ9NRL2 1556 aaPredicted RBP19.08■□□□□ 0.65
UBR7-201ENST00000013070 ITGAEP38570 1179 aa19.08■□□□□ 0.64
UBR7-201ENST00000013070 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
UBR7-201ENST00000013070 GOLGA3Q08378 1498 aa18.95■□□□□ 0.62
UBR7-201ENST00000013070 CLIP1P30622 1438 aa18.94■□□□□ 0.62
UBR7-201ENST00000013070 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
UBR7-201ENST00000013070 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
UBR7-201ENST00000013070 EEA1Q15075 1411 aa18.86■□□□□ 0.61
UBR7-201ENST00000013070 SMARCA4P51532 1647 aa18.83■□□□□ 0.61
UBR7-201ENST00000013070 ATP1B4Q9UN42 357 aaPredicted RBP18.81■□□□□ 0.6
UBR7-201ENST00000013070 EIF4G1Q04637 1599 aaKnown RBP18.8■□□□□ 0.6
UBR7-201ENST00000013070 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
UBR7-201ENST00000013070 BCANQ96GW7 911 aa18.76■□□□□ 0.59
UBR7-201ENST00000013070 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
UBR7-201ENST00000013070 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
UBR7-201ENST00000013070 VPS8Q8N3P4 1428 aa18.72■□□□□ 0.59
UBR7-201ENST00000013070 MYT1Q01538 1121 aa18.72■□□□□ 0.59
UBR7-201ENST00000013070 HIRIP3Q9BW71 556 aaPredicted RBP18.63■□□□□ 0.57
UBR7-201ENST00000013070 KCNH8Q96L42 1107 aa18.62■□□□□ 0.57
UBR7-201ENST00000013070 SUPT16HQ9Y5B9 1047 aaKnown RBP18.62■□□□□ 0.57
UBR7-201ENST00000013070 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
UBR7-201ENST00000013070 SYNJ1O43426 1573 aa18.61■□□□□ 0.57
UBR7-201ENST00000013070 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
UBR7-201ENST00000013070 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
UBR7-201ENST00000013070 DDX10Q13206 875 aaKnown RBP18.57■□□□□ 0.56
UBR7-201ENST00000013070 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
UBR7-201ENST00000013070 KIF21BO75037 1637 aa18.51■□□□□ 0.55
UBR7-201ENST00000013070 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
UBR7-201ENST00000013070 FKBP8Q14318 412 aa18.47■□□□□ 0.55
UBR7-201ENST00000013070 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
UBR7-201ENST00000013070 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
UBR7-201ENST00000013070 NEFLP07196 543 aa18.41■□□□□ 0.54
UBR7-201ENST00000013070 CCNB3Q8WWL7 1395 aa18.41■□□□□ 0.54
UBR7-201ENST00000013070 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
UBR7-201ENST00000013070 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
UBR7-201ENST00000013070 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
UBR7-201ENST00000013070 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
UBR7-201ENST00000013070 RAB3GAP2Q9H2M9 1393 aa18.35■□□□□ 0.53
UBR7-201ENST00000013070 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
UBR7-201ENST00000013070 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
UBR7-201ENST00000013070 ANP32CO43423 234 aa18.28■□□□□ 0.52
UBR7-201ENST00000013070 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
UBR7-201ENST00000013070 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
UBR7-201ENST00000013070 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
UBR7-201ENST00000013070 CUX2O14529 1486 aa18.19■□□□□ 0.5
UBR7-201ENST00000013070 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
UBR7-201ENST00000013070 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
UBR7-201ENST00000013070 TOP2BQ02880 1626 aa18.18■□□□□ 0.5
UBR7-201ENST00000013070 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms