RNA–Protein interactions for RNA: ENSMUST00000218686.1

Trappc6b-207, Transcript of Trafficking protein particle complex subunit 6B, mousemouse

TSL 3 BASIC

Gene Trappc6b, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6b-207ENSMUST00000218686 Efcab5A0JP43 1406 aa38.12■■■■□ 3.69
Trappc6b-207ENSMUST00000218686 Chd1P40201 1711 aa38.12■■■■□ 3.69
Trappc6b-207ENSMUST00000218686 Setbp1Q9Z180 1582 aa38.04■■■■□ 3.68
Trappc6b-207ENSMUST00000218686 Top2aQ01320 1528 aaKnown RBP37.99■■■■□ 3.67
Trappc6b-207ENSMUST00000218686 Plekhg3Q4VAC9 1341 aa37.98■■■■□ 3.67
Trappc6b-207ENSMUST00000218686 CadpsQ80TJ1 1355 aa37.95■■■■□ 3.67
Trappc6b-207ENSMUST00000218686 Ppp1r18Q8BQ30 594 aa37.92■■■■□ 3.66
Trappc6b-207ENSMUST00000218686 Ak9G3UYQ4 1894 aa37.86■■■■□ 3.65
Trappc6b-207ENSMUST00000218686 Pla2r1Q62028 1487 aa37.86■■■■□ 3.65
Trappc6b-207ENSMUST00000218686 Soga1E1U8D0 1418 aa37.84■■■■□ 3.65
Trappc6b-207ENSMUST00000218686 Gpatch8A2A6A1 1505 aa37.83■■■■□ 3.65
Trappc6b-207ENSMUST00000218686 Dnmt1P13864 1620 aaKnown RBP37.8■■■■□ 3.64
Trappc6b-207ENSMUST00000218686 Neo1P97798 1493 aa37.71■■■■□ 3.63
Trappc6b-207ENSMUST00000218686 BC005561E9Q5E2 1589 aa37.68■■■■□ 3.62
Trappc6b-207ENSMUST00000218686 AI481877A2ALV5 1481 aa37.65■■■■□ 3.62
Trappc6b-207ENSMUST00000218686 SynmQ70IV5 1561 aa37.62■■■■□ 3.61
Trappc6b-207ENSMUST00000218686 Gm14025A2AP89 1413 aa37.61■■■■□ 3.61
Trappc6b-207ENSMUST00000218686 Abcc2Q8VI47 1543 aa37.6■■■■□ 3.61
Trappc6b-207ENSMUST00000218686 EprsQ8CGC7 1512 aaKnown RBP37.58■■■■□ 3.61
Trappc6b-207ENSMUST00000218686 NrkQ9R0G8 1455 aa37.57■■■■□ 3.6
Trappc6b-207ENSMUST00000218686 Ccdc88bQ4QRL3 1481 aa37.56■■■■□ 3.6
Trappc6b-207ENSMUST00000218686 Abca16E9PWJ7 1678 aa37.56■■■■□ 3.6
Trappc6b-207ENSMUST00000218686 Map3k4O08648 1597 aa37.55■■■■□ 3.6
Trappc6b-207ENSMUST00000218686 Arhgap27A2AB59 869 aa37.55■■■■□ 3.6
Trappc6b-207ENSMUST00000218686 Ifnlr1Q8CGK5 535 aa37.51■■■■□ 3.6
Trappc6b-207ENSMUST00000218686 AdgbG3UZ78 1657 aa37.5■■■■□ 3.59
Trappc6b-207ENSMUST00000218686 PxdnQ3UQ28 1475 aa37.45■■■■□ 3.59
Trappc6b-207ENSMUST00000218686 Alpk3Q924C5 1678 aa37.44■■■■□ 3.58
Trappc6b-207ENSMUST00000218686 Arhgef12Q8R4H2 1543 aaKnown RBP37.44■■■■□ 3.58
Trappc6b-207ENSMUST00000218686 Clasp1Q80TV8 1535 aaKnown RBP37.43■■■■□ 3.58
Trappc6b-207ENSMUST00000218686 WizO88286 1684 aaKnown RBP37.42■■■■□ 3.58
Trappc6b-207ENSMUST00000218686 Ttc37F8VPK0 1563 aa37.42■■■■□ 3.58
Trappc6b-207ENSMUST00000218686 TchhA0A0B4J1F9 1599 aa37.41■■■■□ 3.58
Trappc6b-207ENSMUST00000218686 Shroom4Q1W617 1475 aa37.39■■■■□ 3.58
Trappc6b-207ENSMUST00000218686 Mapkbp1Q6NS57 1503 aa37.38■■■■□ 3.57
Trappc6b-207ENSMUST00000218686 Arhgef11Q68FM7 1552 aa37.35■■■■□ 3.57
Trappc6b-207ENSMUST00000218686 Eif4g1Q6NZJ6 1600 aaKnown RBP37.29■■■■□ 3.56
Trappc6b-207ENSMUST00000218686 Adamts12Q811B3 1600 aa37.26■■■■□ 3.56
Trappc6b-207ENSMUST00000218686 Slx4Q6P1D7 1565 aa37.25■■■■□ 3.55
Trappc6b-207ENSMUST00000218686 Plppr3Q7TPB0 716 aa37.22■■■■□ 3.55
Trappc6b-207ENSMUST00000218686 Depdc5P61460 1591 aa37.21■■■■□ 3.55
Trappc6b-207ENSMUST00000218686 Zeb1Q64318 1117 aa37.2■■■■□ 3.55
Trappc6b-207ENSMUST00000218686 Arid3cA6PWV5 409 aa37.14■■■■□ 3.54
Trappc6b-207ENSMUST00000218686 Jph4Q80WT0 628 aa37.08■■■■□ 3.53
Trappc6b-207ENSMUST00000218686 Fndc1E9Q043 1732 aa37.07■■■■□ 3.52
Trappc6b-207ENSMUST00000218686 Dnajc5gQ8C632 165 aa37.06■■■■□ 3.52
Trappc6b-207ENSMUST00000218686 Fkbp15Q6P9Q6 1216 aaKnown RBP37.04■■■■□ 3.52
Trappc6b-207ENSMUST00000218686 Lrrc9Q8CDN9 1456 aa37.02■■■■□ 3.52
Trappc6b-207ENSMUST00000218686 Zfyve16Q80U44 1528 aa37.02■■■■□ 3.52
Trappc6b-207ENSMUST00000218686 Znf608Q56A10 1511 aa36.94■■■■□ 3.5
Trappc6b-207ENSMUST00000218686 Rpap1Q80TE0 1409 aa36.93■■■■□ 3.5
Trappc6b-207ENSMUST00000218686 MlecQ6ZQI3 291 aaKnown RBP36.9■■■■□ 3.5
Trappc6b-207ENSMUST00000218686 Cyb5rlB1AS42 316 aa36.88■■■■□ 3.49
Trappc6b-207ENSMUST00000218686 Igf1rQ60751 1373 aa36.83■■■■□ 3.49
Trappc6b-207ENSMUST00000218686 Mroh2bQ7M6Y6 1581 aa36.83■■■■□ 3.49
Trappc6b-207ENSMUST00000218686 Abca5Q8K448 1642 aa36.8■■■■□ 3.48
Trappc6b-207ENSMUST00000218686 Gm7298A0A0N4SVU1 1476 aa36.76■■■■□ 3.48
Trappc6b-207ENSMUST00000218686 Kdm5bQ80Y84 1544 aa36.75■■■■□ 3.47
Trappc6b-207ENSMUST00000218686 Brwd3A2AHJ4 1799 aa36.75■■■■□ 3.47
Trappc6b-207ENSMUST00000218686 Chic1Q8CBW7 227 aa36.73■■■■□ 3.47
Trappc6b-207ENSMUST00000218686 Wdr7Q920I9 1489 aa36.72■■■■□ 3.47
Trappc6b-207ENSMUST00000218686 Rrbp1Q99PL5 1605 aaKnown RBP36.69■■■■□ 3.46
Trappc6b-207ENSMUST00000218686 Ercc6l2Q9JIM3 1537 aa36.66■■■■□ 3.46
Trappc6b-207ENSMUST00000218686 WrnO09053 1401 aa36.61■■■■□ 3.45
Trappc6b-207ENSMUST00000218686 Hecw2Q6I6G8 1578 aa36.6■■■■□ 3.45
Trappc6b-207ENSMUST00000218686 AglF8VPN4 1532 aa36.59■■■■□ 3.45
Trappc6b-207ENSMUST00000218686 Kdm6bQ5NCY0 1641 aa36.58■■■■□ 3.45
Trappc6b-207ENSMUST00000218686 Carmil1Q6EDY6 1374 aa36.55■■■■□ 3.44
Trappc6b-207ENSMUST00000218686 Cul7Q8VE73 1689 aa36.55■■■■□ 3.44
Trappc6b-207ENSMUST00000218686 Rnf17Q99MV7 1640 aa36.54■■■■□ 3.44
Trappc6b-207ENSMUST00000218686 NhsB1AV60 1647 aa36.52■■■■□ 3.44
Trappc6b-207ENSMUST00000218686 Map3k1P53349 1493 aa36.51■■■■□ 3.44
Trappc6b-207ENSMUST00000218686 Npm2Q80W85 207 aa36.47■■■■□ 3.43
Trappc6b-207ENSMUST00000218686 Atp10dQ8K2X1 1416 aa36.42■■■■□ 3.42
Trappc6b-207ENSMUST00000218686 Polr1aO35134 1717 aaKnown RBP36.32■■■■□ 3.4
Trappc6b-207ENSMUST00000218686 Arhgap31A6X8Z5 1425 aa36.3■■■■□ 3.4
Trappc6b-207ENSMUST00000218686 Naip2Q9QUK4 1447 aa36.3■■■■□ 3.4
Trappc6b-207ENSMUST00000218686 Fbxo41Q6NS60 873 aa36.26■■■■□ 3.4
Trappc6b-207ENSMUST00000218686 Ccdc141E9Q8Q6 1531 aa36.23■■■■□ 3.39
Trappc6b-207ENSMUST00000218686 A2mQ6GQT1 1474 aa36.2■■■■□ 3.39
Trappc6b-207ENSMUST00000218686 Cux1P53564 1515 aa36.18■■■■□ 3.38
Trappc6b-207ENSMUST00000218686 Arhgap35Q91YM2 1499 aa36.15■■■■□ 3.38
Trappc6b-207ENSMUST00000218686 Gcc2Q8CHG3 1679 aa36.15■■■■□ 3.38
Trappc6b-207ENSMUST00000218686 Mroh2aD3Z750 1679 aa36.11■■■■□ 3.37
Trappc6b-207ENSMUST00000218686 Abca8bQ8K440 1620 aa36.09■■■■□ 3.37
Trappc6b-207ENSMUST00000218686 Qser1A2BIE1 1698 aa36.05■■■■□ 3.36
Trappc6b-207ENSMUST00000218686 PtprmP28828 1452 aa36.03■■■■□ 3.36
Trappc6b-207ENSMUST00000218686 Kiaa1210E9Q0C6 1637 aa36■■■■□ 3.35
Trappc6b-207ENSMUST00000218686 Kif14L0N7N1 1674 aaKnown RBP35.98■■■■□ 3.35
Trappc6b-207ENSMUST00000218686 Fancd2Q80V62 1450 aa35.93■■■■□ 3.34
Trappc6b-207ENSMUST00000218686 Fyco1Q8VDC1 1437 aa35.91■■■■□ 3.34
Trappc6b-207ENSMUST00000218686 Neurl4Q5NCX5 1563 aa35.89■■■■□ 3.34
Trappc6b-207ENSMUST00000218686 Adamtsl3G3UXC7 1706 aa35.87■■■■□ 3.33
Trappc6b-207ENSMUST00000218686 Synj2Q9D2G5 1434 aa35.86■■■■□ 3.33
Trappc6b-207ENSMUST00000218686 Clip1Q922J3 1391 aa35.86■■■■□ 3.33
Trappc6b-207ENSMUST00000218686 Mlh3A0A1Y7VMP7 1443 aa35.82■■■■□ 3.32
Trappc6b-207ENSMUST00000218686 Cypt1Q8CH20 168 aa35.81■■■■□ 3.32
Trappc6b-207ENSMUST00000218686 HrcG5E8J6 738 aa35.8■■■■□ 3.32
Trappc6b-207ENSMUST00000218686 Abca9Q8K449 1623 aa35.79■■■■□ 3.32
Trappc6b-207ENSMUST00000218686 MyclP10166 368 aa35.79■■■■□ 3.32
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms