RNA–Protein interactions for RNA: ENSMUST00000141084.2

Smarca1-205, Transcript of Probable global transcription activator SNF2L1, mousemouse

TSL 2 BASIC

Gene Smarca1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-205ENSMUST00000141084 Urb2E9Q7L1 1524 aaKnown RBP18.52■□□□□ 0.56
Smarca1-205ENSMUST00000141084 Cux1P53564 1515 aa18.52■□□□□ 0.56
Smarca1-205ENSMUST00000141084 Tiam1Q60610 1591 aa18.52■□□□□ 0.56
Smarca1-205ENSMUST00000141084 Ncapd3Q6ZQK0 1506 aa18.52■□□□□ 0.56
Smarca1-205ENSMUST00000141084 Ap3b1Q9Z1T1 1105 aa18.51■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Lmo7E9PYF4 1699 aaKnown RBP18.5■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Lrriq1Q0P5X1 1673 aa18.5■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Pcf11G3X9Z4 1553 aa18.5■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Pcgf6Q99NA9 353 aa18.48■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Rad54l2Q99NG0 1466 aa18.48■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Naip1Q9QWK5 1403 aa18.47■□□□□ 0.55
Smarca1-205ENSMUST00000141084 Disp1Q3TDN0 1521 aa18.43■□□□□ 0.54
Smarca1-205ENSMUST00000141084 Slx4Q6P1D7 1565 aa18.42■□□□□ 0.54
Smarca1-205ENSMUST00000141084 Magi3Q9EQJ9 1476 aa18.42■□□□□ 0.54
Smarca1-205ENSMUST00000141084 Ift140E9PY46 1464 aa18.39■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Pla2r1Q62028 1487 aa18.39■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Fyco1Q8VDC1 1437 aa18.37■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Polr1aO35134 1717 aaKnown RBP18.37■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Supt5hO55201 1082 aaKnown RBP18.37■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Grin2aP35436 1464 aa18.36■□□□□ 0.53
Smarca1-205ENSMUST00000141084 CntlnA2AM05 1397 aa18.35■□□□□ 0.53
Smarca1-205ENSMUST00000141084 BlmO88700 1416 aa18.35■□□□□ 0.53
Smarca1-205ENSMUST00000141084 Peg3Q3URU2 1571 aa18.33■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Rpap1Q80TE0 1409 aa18.33■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Setd1bQ8CFT2 1985 aa18.32■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Nup160Q9Z0W3 1402 aaKnown RBP18.32■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Pbrm1Q8BSQ9 1634 aaKnown RBP18.32■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Gpatch8A2A6A1 1505 aa18.31■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Kdm5bQ80Y84 1544 aa18.31■□□□□ 0.52
Smarca1-205ENSMUST00000141084 EprsQ8CGC7 1512 aaKnown RBP18.31■□□□□ 0.52
Smarca1-205ENSMUST00000141084 TchhA0A0B4J1F9 1599 aa18.28■□□□□ 0.52
Smarca1-205ENSMUST00000141084 Aebp1Q640N1 1128 aa18.26■□□□□ 0.51
Smarca1-205ENSMUST00000141084 CadpsQ80TJ1 1355 aa18.24■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Abca5Q8K448 1642 aa18.24■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Gm1043A0A140LJC2 1431 aa18.24■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Eif4g3Q80XI3 1579 aaKnown RBP18.22■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Adamts12Q811B3 1600 aa18.22■□□□□ 0.51
Smarca1-205ENSMUST00000141084 Cc2d2bA0A286YDU8 1405 aa18.2■□□□□ 0.5
Smarca1-205ENSMUST00000141084 Lmod2Q3UHZ5 550 aa18.2■□□□□ 0.5
Smarca1-205ENSMUST00000141084 Gm7298A0A0N4SVU1 1476 aa18.2■□□□□ 0.5
Smarca1-205ENSMUST00000141084 WizO88286 1684 aaKnown RBP18.19■□□□□ 0.5
Smarca1-205ENSMUST00000141084 3425401B19RikD3Z1D3 1412 aa18.19■□□□□ 0.5
Smarca1-205ENSMUST00000141084 Rusc2Q80U22 1514 aa18.18■□□□□ 0.5
Smarca1-205ENSMUST00000141084 Abca16E9PWJ7 1678 aa18.13■□□□□ 0.49
Smarca1-205ENSMUST00000141084 PxdnQ3UQ28 1475 aa18.13■□□□□ 0.49
Smarca1-205ENSMUST00000141084 Soga1E1U8D0 1418 aa18.12■□□□□ 0.49
Smarca1-205ENSMUST00000141084 TonslQ6NZL6 1363 aa18.09■□□□□ 0.49
Smarca1-205ENSMUST00000141084 Las1lA2BE28 776 aaKnown RBP18.09■□□□□ 0.49
Smarca1-205ENSMUST00000141084 Sall2Q9QX96 1004 aa18.09■□□□□ 0.49
Smarca1-205ENSMUST00000141084 Lmtk2Q3TYD6 1471 aa18.06■□□□□ 0.48
Smarca1-205ENSMUST00000141084 Abcc2Q8VI47 1543 aa18.06■□□□□ 0.48
Smarca1-205ENSMUST00000141084 Aebp2Q9Z248 504 aaKnown RBP18.06■□□□□ 0.48
Smarca1-205ENSMUST00000141084 Kif27Q7M6Z4 1394 aa18.04■□□□□ 0.48
Smarca1-205ENSMUST00000141084 Naip2Q9QUK4 1447 aa18■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Ccnb3Q810T2 1396 aa17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 BC005561E9Q5E2 1589 aa17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Fhad1A6PWD2 1420 aa17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Fam50aQ9WV03 339 aaKnown RBP17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 A2mQ6GQT1 1474 aa17.99■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Arhgap27A2AB59 869 aa17.97■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Eid3Q3V124 375 aa17.97■□□□□ 0.47
Smarca1-205ENSMUST00000141084 WrnO09053 1401 aa17.97■□□□□ 0.47
Smarca1-205ENSMUST00000141084 NexmifQ5DTT1 1515 aa17.97■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Shroom2A2ALU4 1481 aa17.96■□□□□ 0.47
Smarca1-205ENSMUST00000141084 Gcc2Q8CHG3 1679 aa17.96■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Mia2Q91ZV0 1396 aa17.95■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Map3k4O08648 1597 aa17.94■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Vps8Q0P5W1 1427 aa17.94■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Dnmt1P13864 1620 aaKnown RBP17.93■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Rapgef6Q5NCJ1 1609 aa17.91■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Wdr66E9Q743 1299 aa17.9■□□□□ 0.46
Smarca1-205ENSMUST00000141084 Ncoa3O09000 1398 aa17.89■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Dennd4bQ3U1Y4 1499 aa17.89■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Mug1P28665 1476 aa17.89■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Fgd6Q69ZL1 1399 aa17.88■□□□□ 0.45
Smarca1-205ENSMUST00000141084 ClspnQ80YR7 1315 aa17.87■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Arhgef11Q68FM7 1552 aa17.85■□□□□ 0.45
Smarca1-205ENSMUST00000141084 Neo1P97798 1493 aa17.83■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Ankrd36D3Z4K0 1415 aa17.83■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Cdc42bpaQ3UU96 1719 aa17.82■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Zcchc11B2RX14 1644 aaKnown RBP17.81■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Ccer2J3QPU5 274 aa17.81■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Kiaa1551Q5DTW7 1521 aa17.8■□□□□ 0.44
Smarca1-205ENSMUST00000141084 UacaQ8CGB3 1411 aa17.8■□□□□ 0.44
Smarca1-205ENSMUST00000141084 AknaQ80VW7 1404 aa17.79■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Chic2Q9D9G3 165 aa17.79■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Arhgap31A6X8Z5 1425 aa17.78■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Arhgef40Q3UPH7 1517 aa17.78■□□□□ 0.44
Smarca1-205ENSMUST00000141084 Fhod3Q76LL6 1578 aa17.77■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Arhgef12Q8R4H2 1543 aaKnown RBP17.76■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Mroh2aD3Z750 1679 aa17.75■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Kdm6bQ5NCY0 1641 aa17.75■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Jph4Q80WT0 628 aa17.75■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Abcc5Q9R1X5 1436 aa17.74■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Rfx7F8VPJ6 1459 aa17.74■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Ppargc1bQ8VHJ7 1014 aa17.73■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Ccdc141E9Q8Q6 1531 aa17.73■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Adcy10Q8C0T9 1614 aa17.73■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Rrbp1Q99PL5 1605 aaKnown RBP17.72■□□□□ 0.43
Smarca1-205ENSMUST00000141084 Ncoa2Q61026 1462 aa17.72■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms