RNA–Protein interactions for RNA: ENSMUST00000141084.2

Smarca1-205, Transcript of Probable global transcription activator SNF2L1, mousemouse

TSL 2 BASIC

Gene Smarca1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-205ENSMUST00000141084 NischQ80TM9 1593 aa24.78■■□□□ 1.56
Smarca1-205ENSMUST00000141084 Gm35339A0A140LHH9 1649 aa24.73■■□□□ 1.55
Smarca1-205ENSMUST00000141084 Abcc9P70170 1546 aa24.1■■□□□ 1.45
Smarca1-205ENSMUST00000141084 Abcc8B2RUS7 1588 aa23.72■■□□□ 1.39
Smarca1-205ENSMUST00000141084 Rhox8Q6VSS7 320 aa22.47■■□□□ 1.19
Smarca1-205ENSMUST00000141084 ScribQ80U72 1612 aa22.43■■□□□ 1.18
Smarca1-205ENSMUST00000141084 Dcaf1Q80TR8 1506 aa22.04■■□□□ 1.12
Smarca1-205ENSMUST00000141084 Rtl1Q7M732 1744 aa22.04■■□□□ 1.12
Smarca1-205ENSMUST00000141084 Kdm5dQ62240 1548 aa21.86■■□□□ 1.09
Smarca1-205ENSMUST00000141084 NacadQ5SWP3 1504 aa21.78■■□□□ 1.08
Smarca1-205ENSMUST00000141084 Rb1cc1Q9ESK9 1588 aa21.69■■□□□ 1.06
Smarca1-205ENSMUST00000141084 Ccdc180J3QNE4 1664 aa21.55■■□□□ 1.04
Smarca1-205ENSMUST00000141084 Baz1aO88379 1555 aa21.44■■□□□ 1.02
Smarca1-205ENSMUST00000141084 Zcchc6Q5BLK4 1491 aaKnown RBP21.44■■□□□ 1.02
Smarca1-205ENSMUST00000141084 Sycp2Q9CUU3 1500 aa21.33■■□□□ 1.01
Smarca1-205ENSMUST00000141084 Crybg2B7ZCC2 1516 aa21.16■□□□□ 0.98
Smarca1-205ENSMUST00000141084 Smarca2Q6DIC0 1577 aa20.96■□□□□ 0.95
Smarca1-205ENSMUST00000141084 BicraF8VPZ9 1578 aa20.94■□□□□ 0.94
Smarca1-205ENSMUST00000141084 Ccdc136Q3TVA9 1136 aa20.91■□□□□ 0.94
Smarca1-205ENSMUST00000141084 HrcG5E8J6 738 aa20.56■□□□□ 0.88
Smarca1-205ENSMUST00000141084 Trim41Q5NCC3 630 aa20.52■□□□□ 0.87
Smarca1-205ENSMUST00000141084 Cecr2E9Q2Z1 1453 aa20.51■□□□□ 0.87
Smarca1-205ENSMUST00000141084 Brd4Q9ESU6 1400 aaKnown RBP20.36■□□□□ 0.85
Smarca1-205ENSMUST00000141084 Synj1Q8CHC4 1574 aa20.28■□□□□ 0.84
Smarca1-205ENSMUST00000141084 Smarca4Q3TKT4 1613 aaKnown RBP20.27■□□□□ 0.83
Smarca1-205ENSMUST00000141084 CftrP26361 1476 aa20.18■□□□□ 0.82
Smarca1-205ENSMUST00000141084 Pds5bQ4VA53 1446 aaKnown RBP20.12■□□□□ 0.81
Smarca1-205ENSMUST00000141084 Atad2bE9Q166 1460 aaKnown RBP20.12■□□□□ 0.81
Smarca1-205ENSMUST00000141084 Cep164Q5DU05 1446 aa20.1■□□□□ 0.81
Smarca1-205ENSMUST00000141084 Cttnbp2B9EJA2 1648 aa20.09■□□□□ 0.81
Smarca1-205ENSMUST00000141084 Golga3P55937 1487 aa20.08■□□□□ 0.81
Smarca1-205ENSMUST00000141084 Iqgap2Q3UQ44 1575 aa20.05■□□□□ 0.8
Smarca1-205ENSMUST00000141084 Cngb1E1AZ71 1325 aa20■□□□□ 0.79
Smarca1-205ENSMUST00000141084 Rsf1E9PWW9 1441 aaKnown RBP20■□□□□ 0.79
Smarca1-205ENSMUST00000141084 Top2bQ64511 1612 aa19.95■□□□□ 0.78
Smarca1-205ENSMUST00000141084 Chic1Q8CBW7 227 aa19.94■□□□□ 0.78
Smarca1-205ENSMUST00000141084 Ccdc88bQ4QRL3 1481 aa19.92■□□□□ 0.78
Smarca1-205ENSMUST00000141084 Esf1Q3V1V3 845 aaKnown RBP19.84■□□□□ 0.77
Smarca1-205ENSMUST00000141084 Wdr62Q3U3T8 1523 aa19.76■□□□□ 0.75
Smarca1-205ENSMUST00000141084 Frmpd1A2AKB4 1549 aa19.74■□□□□ 0.75
Smarca1-205ENSMUST00000141084 Cc2d2aQ8CFW7 1633 aa19.73■□□□□ 0.75
Smarca1-205ENSMUST00000141084 Ercc6F8VPZ5 1481 aa19.72■□□□□ 0.75
Smarca1-205ENSMUST00000141084 Thoc2B1AZI6 1594 aaKnown RBP19.71■□□□□ 0.75
Smarca1-205ENSMUST00000141084 Ehmt2Q9Z148 1263 aaKnown RBP19.68■□□□□ 0.74
Smarca1-205ENSMUST00000141084 Fmn1Q05860 1466 aa19.61■□□□□ 0.73
Smarca1-205ENSMUST00000141084 Gab3Q8BSM5 595 aa19.61■□□□□ 0.73
Smarca1-205ENSMUST00000141084 Rpgrip1Q9EPQ2 1331 aa19.56■□□□□ 0.72
Smarca1-205ENSMUST00000141084 Acin1Q9JIX8 1338 aaKnown RBP19.56■□□□□ 0.72
Smarca1-205ENSMUST00000141084 Unc13aQ4KUS2 1712 aa19.52■□□□□ 0.71
Smarca1-205ENSMUST00000141084 Top2aQ01320 1528 aaKnown RBP19.5■□□□□ 0.71
Smarca1-205ENSMUST00000141084 TnnQ80Z71 1560 aa19.44■□□□□ 0.7
Smarca1-205ENSMUST00000141084 Phldb1Q6PDH0 1371 aaKnown RBP19.42■□□□□ 0.7
Smarca1-205ENSMUST00000141084 Fam135aQ6NS59 1506 aa19.4■□□□□ 0.7
Smarca1-205ENSMUST00000141084 Rapgef2Q8CHG7 1496 aa19.38■□□□□ 0.69
Smarca1-205ENSMUST00000141084 Lamc3Q9R0B6 1581 aa19.37■□□□□ 0.69
Smarca1-205ENSMUST00000141084 Kif15Q6P9L6 1387 aa19.28■□□□□ 0.68
Smarca1-205ENSMUST00000141084 Dnajc5bQ9CQ94 199 aa19.25■□□□□ 0.67
Smarca1-205ENSMUST00000141084 Cep162Q6ZQ06 1403 aa19.21■□□□□ 0.67
Smarca1-205ENSMUST00000141084 Ubl4bQ9CQ84 188 aa19.21■□□□□ 0.67
Smarca1-205ENSMUST00000141084 Eif4g1Q6NZJ6 1600 aaKnown RBP19.17■□□□□ 0.66
Smarca1-205ENSMUST00000141084 Baz1bQ9Z277 1479 aa19.12■□□□□ 0.65
Smarca1-205ENSMUST00000141084 Camsap1A2AHC3 1581 aa19.11■□□□□ 0.65
Smarca1-205ENSMUST00000141084 Cux2P70298 1426 aa19.1■□□□□ 0.65
Smarca1-205ENSMUST00000141084 PtprkP35822 1457 aa19.07■□□□□ 0.64
Smarca1-205ENSMUST00000141084 Ccdc18Q640L5 1455 aa19.04■□□□□ 0.64
Smarca1-205ENSMUST00000141084 NrkQ9R0G8 1455 aa19.03■□□□□ 0.64
Smarca1-205ENSMUST00000141084 Npm2Q80W85 207 aa19.01■□□□□ 0.63
Smarca1-205ENSMUST00000141084 Il27Q8K3I6 234 aa18.99■□□□□ 0.63
Smarca1-205ENSMUST00000141084 Arhgap35Q91YM2 1499 aa18.98■□□□□ 0.63
Smarca1-205ENSMUST00000141084 Shroom4Q1W617 1475 aa18.97■□□□□ 0.63
Smarca1-205ENSMUST00000141084 Myt1lP97500 1187 aa18.96■□□□□ 0.63
Smarca1-205ENSMUST00000141084 Grin2bQ01097 1482 aa18.95■□□□□ 0.62
Smarca1-205ENSMUST00000141084 Mrc2Q64449 1479 aa18.95■□□□□ 0.62
Smarca1-205ENSMUST00000141084 Npm1Q61937 292 aaKnown RBP18.91■□□□□ 0.62
Smarca1-205ENSMUST00000141084 LrpprcQ6PB66 1392 aaKnown RBP18.85■□□□□ 0.61
Smarca1-205ENSMUST00000141084 Map3k1P53349 1493 aa18.84■□□□□ 0.61
Smarca1-205ENSMUST00000141084 Mier1Q5UAK0 511 aa18.83■□□□□ 0.61
Smarca1-205ENSMUST00000141084 PogzQ8BZH4 1409 aaKnown RBP18.81■□□□□ 0.6
Smarca1-205ENSMUST00000141084 Clip1Q922J3 1391 aa18.8■□□□□ 0.6
Smarca1-205ENSMUST00000141084 Mroh2bQ7M6Y6 1581 aa18.78■□□□□ 0.6
Smarca1-205ENSMUST00000141084 Kif21aQ9QXL2 1672 aa18.78■□□□□ 0.6
Smarca1-205ENSMUST00000141084 Dhx29Q6PGC1 1365 aaKnown RBP18.75■□□□□ 0.59
Smarca1-205ENSMUST00000141084 Duox2A2AQ99 1517 aa18.75■□□□□ 0.59
Smarca1-205ENSMUST00000141084 Efcab5A0JP43 1406 aa18.74■□□□□ 0.59
Smarca1-205ENSMUST00000141084 Arap1Q4LDD4 1452 aa18.72■□□□□ 0.59
Smarca1-205ENSMUST00000141084 UbtfP25976 765 aaKnown RBP18.71■□□□□ 0.59
Smarca1-205ENSMUST00000141084 Eea1Q8BL66 1411 aa18.69■□□□□ 0.58
Smarca1-205ENSMUST00000141084 AqrQ8CFQ3 1481 aaKnown RBP18.68■□□□□ 0.58
Smarca1-205ENSMUST00000141084 Crocc2F6XLV1 1638 aa18.66■□□□□ 0.58
Smarca1-205ENSMUST00000141084 Arhgef5E9Q7D5 1581 aa18.64■□□□□ 0.57
Smarca1-205ENSMUST00000141084 Samd9lQ69Z37 1561 aa18.63■□□□□ 0.57
Smarca1-205ENSMUST00000141084 Plekhg3Q4VAC9 1341 aa18.63■□□□□ 0.57
Smarca1-205ENSMUST00000141084 Setd5Q5XJV7 1441 aa18.62■□□□□ 0.57
Smarca1-205ENSMUST00000141084 Ankrd26Q811D2 1581 aa18.62■□□□□ 0.57
Smarca1-205ENSMUST00000141084 Erich3F6QRE9 1637 aa18.61■□□□□ 0.57
Smarca1-205ENSMUST00000141084 NefmP08553 848 aa18.61■□□□□ 0.57
Smarca1-205ENSMUST00000141084 Zeb1Q64318 1117 aa18.61■□□□□ 0.57
Smarca1-205ENSMUST00000141084 Carmil1Q6EDY6 1374 aa18.56■□□□□ 0.56
Smarca1-205ENSMUST00000141084 Plb1Q3TTY0 1478 aa18.54■□□□□ 0.56
Smarca1-205ENSMUST00000141084 SynmQ70IV5 1561 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 241.6 ms