RNA–Protein interactions for RNA: ENSMUST00000113684.7

Tpm1-204, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 887 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-204ENSMUST00000113684 Ythdc2B2RR83 1445 aaKnown RBP30.36■■■□□ 2.45
Tpm1-204ENSMUST00000113684 Pprc1Q6NZN1 1644 aa30.33■■■□□ 2.45
Tpm1-204ENSMUST00000113684 NrkQ9R0G8 1455 aa30.3■■■□□ 2.44
Tpm1-204ENSMUST00000113684 Chic1Q8CBW7 227 aa30.29■■■□□ 2.44
Tpm1-204ENSMUST00000113684 Rapgef2Q8CHG7 1496 aa30.28■■■□□ 2.44
Tpm1-204ENSMUST00000113684 CadpsQ80TJ1 1355 aa30.23■■■□□ 2.43
Tpm1-204ENSMUST00000113684 Pla2r1Q62028 1487 aa30.23■■■□□ 2.43
Tpm1-204ENSMUST00000113684 Shroom4Q1W617 1475 aa30.15■■■□□ 2.42
Tpm1-204ENSMUST00000113684 Soga1E1U8D0 1418 aa30.14■■■□□ 2.42
Tpm1-204ENSMUST00000113684 Ppp1r18Q8BQ30 594 aa30.1■■■□□ 2.41
Tpm1-204ENSMUST00000113684 Chd1P40201 1711 aa30.1■■■□□ 2.41
Tpm1-204ENSMUST00000113684 SynmQ70IV5 1561 aa30.08■■■□□ 2.41
Tpm1-204ENSMUST00000113684 Gpatch8A2A6A1 1505 aa30.07■■■□□ 2.4
Tpm1-204ENSMUST00000113684 Arhgap27A2AB59 869 aa30.07■■■□□ 2.4
Tpm1-204ENSMUST00000113684 Setbp1Q9Z180 1582 aa30.06■■■□□ 2.4
Tpm1-204ENSMUST00000113684 Neo1P97798 1493 aa30.06■■■□□ 2.4
Tpm1-204ENSMUST00000113684 Dnmt1P13864 1620 aaKnown RBP30.03■■■□□ 2.4
Tpm1-204ENSMUST00000113684 Zeb1Q64318 1117 aa30■■■□□ 2.39
Tpm1-204ENSMUST00000113684 Gm14025A2AP89 1413 aa29.96■■■□□ 2.39
Tpm1-204ENSMUST00000113684 Abcc2Q8VI47 1543 aa29.96■■■□□ 2.39
Tpm1-204ENSMUST00000113684 Ifnlr1Q8CGK5 535 aa29.94■■■□□ 2.38
Tpm1-204ENSMUST00000113684 BC005561E9Q5E2 1589 aa29.94■■■□□ 2.38
Tpm1-204ENSMUST00000113684 PxdnQ3UQ28 1475 aa29.92■■■□□ 2.38
Tpm1-204ENSMUST00000113684 Map3k4O08648 1597 aa29.9■■■□□ 2.38
Tpm1-204ENSMUST00000113684 AI481877A2ALV5 1481 aa29.88■■■□□ 2.37
Tpm1-204ENSMUST00000113684 Abca16E9PWJ7 1678 aa29.87■■■□□ 2.37
Tpm1-204ENSMUST00000113684 Plekhg3Q4VAC9 1341 aa29.87■■■□□ 2.37
Tpm1-204ENSMUST00000113684 TchhA0A0B4J1F9 1599 aa29.86■■■□□ 2.37
Tpm1-204ENSMUST00000113684 WizO88286 1684 aaKnown RBP29.83■■■□□ 2.37
Tpm1-204ENSMUST00000113684 Ak9G3UYQ4 1894 aa29.82■■■□□ 2.37
Tpm1-204ENSMUST00000113684 EprsQ8CGC7 1512 aaKnown RBP29.76■■■□□ 2.35
Tpm1-204ENSMUST00000113684 Mroh2bQ7M6Y6 1581 aa29.75■■■□□ 2.35
Tpm1-204ENSMUST00000113684 Arhgef12Q8R4H2 1543 aaKnown RBP29.72■■■□□ 2.35
Tpm1-204ENSMUST00000113684 Adamts12Q811B3 1600 aa29.72■■■□□ 2.35
Tpm1-204ENSMUST00000113684 Slx4Q6P1D7 1565 aa29.69■■■□□ 2.34
Tpm1-204ENSMUST00000113684 Eif4g1Q6NZJ6 1600 aaKnown RBP29.68■■■□□ 2.34
Tpm1-204ENSMUST00000113684 Fkbp15Q6P9Q6 1216 aaKnown RBP29.67■■■□□ 2.34
Tpm1-204ENSMUST00000113684 Jph4Q80WT0 628 aa29.67■■■□□ 2.34
Tpm1-204ENSMUST00000113684 Npm2Q80W85 207 aa29.65■■■□□ 2.34
Tpm1-204ENSMUST00000113684 Clasp1Q80TV8 1535 aaKnown RBP29.63■■■□□ 2.33
Tpm1-204ENSMUST00000113684 Arid3cA6PWV5 409 aa29.62■■■□□ 2.33
Tpm1-204ENSMUST00000113684 Rpap1Q80TE0 1409 aa29.62■■■□□ 2.33
Tpm1-204ENSMUST00000113684 HrcG5E8J6 738 aa29.59■■■□□ 2.33
Tpm1-204ENSMUST00000113684 Ttc37F8VPK0 1563 aa29.56■■■□□ 2.32
Tpm1-204ENSMUST00000113684 AdgbG3UZ78 1657 aa29.54■■■□□ 2.32
Tpm1-204ENSMUST00000113684 Plppr3Q7TPB0 716 aa29.54■■■□□ 2.32
Tpm1-204ENSMUST00000113684 Mapkbp1Q6NS57 1503 aa29.54■■■□□ 2.32
Tpm1-204ENSMUST00000113684 Arhgap35Q91YM2 1499 aa29.52■■■□□ 2.32
Tpm1-204ENSMUST00000113684 Carmil1Q6EDY6 1374 aa29.52■■■□□ 2.32
Tpm1-204ENSMUST00000113684 Map3k1P53349 1493 aa29.5■■■□□ 2.31
Tpm1-204ENSMUST00000113684 Depdc5P61460 1591 aa29.49■■■□□ 2.31
Tpm1-204ENSMUST00000113684 Gm7298A0A0N4SVU1 1476 aa29.48■■■□□ 2.31
Tpm1-204ENSMUST00000113684 Gab3Q8BSM5 595 aa29.45■■■□□ 2.31
Tpm1-204ENSMUST00000113684 Arhgef11Q68FM7 1552 aa29.43■■■□□ 2.3
Tpm1-204ENSMUST00000113684 Lrrc9Q8CDN9 1456 aa29.43■■■□□ 2.3
Tpm1-204ENSMUST00000113684 Znf608Q56A10 1511 aa29.4■■■□□ 2.3
Tpm1-204ENSMUST00000113684 Igf1rQ60751 1373 aa29.39■■■□□ 2.3
Tpm1-204ENSMUST00000113684 Alpk3Q924C5 1678 aa29.39■■■□□ 2.3
Tpm1-204ENSMUST00000113684 Zfyve16Q80U44 1528 aa29.36■■■□□ 2.29
Tpm1-204ENSMUST00000113684 Dnajc5gQ8C632 165 aa29.36■■■□□ 2.29
Tpm1-204ENSMUST00000113684 WrnO09053 1401 aa29.36■■■□□ 2.29
Tpm1-204ENSMUST00000113684 Fndc1E9Q043 1732 aa29.32■■■□□ 2.28
Tpm1-204ENSMUST00000113684 Abca5Q8K448 1642 aa29.32■■■□□ 2.28
Tpm1-204ENSMUST00000113684 Cep162Q6ZQ06 1403 aa29.3■■■□□ 2.28
Tpm1-204ENSMUST00000113684 Kdm5bQ80Y84 1544 aa29.3■■■□□ 2.28
Tpm1-204ENSMUST00000113684 Polr1aO35134 1717 aaKnown RBP29.29■■■□□ 2.28
Tpm1-204ENSMUST00000113684 Wdr7Q920I9 1489 aa29.25■■■□□ 2.27
Tpm1-204ENSMUST00000113684 Clip1Q922J3 1391 aa29.24■■■□□ 2.27
Tpm1-204ENSMUST00000113684 Cux1P53564 1515 aa29.21■■■□□ 2.27
Tpm1-204ENSMUST00000113684 Rrbp1Q99PL5 1605 aaKnown RBP29.21■■■□□ 2.27
Tpm1-204ENSMUST00000113684 MlecQ6ZQI3 291 aaKnown RBP29.21■■■□□ 2.27
Tpm1-204ENSMUST00000113684 Arhgap31A6X8Z5 1425 aa29.09■■■□□ 2.25
Tpm1-204ENSMUST00000113684 Atp10dQ8K2X1 1416 aa29.08■■■□□ 2.25
Tpm1-204ENSMUST00000113684 Fyco1Q8VDC1 1437 aa29.08■■■□□ 2.25
Tpm1-204ENSMUST00000113684 NhsB1AV60 1647 aa29.06■■■□□ 2.24
Tpm1-204ENSMUST00000113684 Myt1lP97500 1187 aa29.05■■■□□ 2.24
Tpm1-204ENSMUST00000113684 Cyb5rlB1AS42 316 aa29.04■■■□□ 2.24
Tpm1-204ENSMUST00000113684 AglF8VPN4 1532 aa29.04■■■□□ 2.24
Tpm1-204ENSMUST00000113684 Cul7Q8VE73 1689 aa28.99■■■□□ 2.23
Tpm1-204ENSMUST00000113684 Ccdc141E9Q8Q6 1531 aa28.98■■■□□ 2.23
Tpm1-204ENSMUST00000113684 Ankrd26Q811D2 1581 aa28.93■■■□□ 2.22
Tpm1-204ENSMUST00000113684 Rnf17Q99MV7 1640 aa28.9■■■□□ 2.22
Tpm1-204ENSMUST00000113684 Kdm6bQ5NCY0 1641 aa28.85■■■□□ 2.21
Tpm1-204ENSMUST00000113684 A2mQ6GQT1 1474 aa28.85■■■□□ 2.21
Tpm1-204ENSMUST00000113684 Mroh2aD3Z750 1679 aa28.81■■■□□ 2.2
Tpm1-204ENSMUST00000113684 Brwd3A2AHJ4 1799 aa28.8■■■□□ 2.2
Tpm1-204ENSMUST00000113684 Gcc2Q8CHG3 1679 aa28.77■■■□□ 2.2
Tpm1-204ENSMUST00000113684 Ercc6l2Q9JIM3 1537 aa28.75■■■□□ 2.19
Tpm1-204ENSMUST00000113684 Fancd2Q80V62 1450 aa28.75■■■□□ 2.19
Tpm1-204ENSMUST00000113684 Aebp1Q640N1 1128 aa28.75■■■□□ 2.19
Tpm1-204ENSMUST00000113684 Naip2Q9QUK4 1447 aa28.75■■■□□ 2.19
Tpm1-204ENSMUST00000113684 Abca8bQ8K440 1620 aa28.73■■■□□ 2.19
Tpm1-204ENSMUST00000113684 Ncoa2Q61026 1462 aa28.7■■■□□ 2.18
Tpm1-204ENSMUST00000113684 Setd5Q5XJV7 1441 aa28.69■■■□□ 2.18
Tpm1-204ENSMUST00000113684 Erich3F6QRE9 1637 aa28.69■■■□□ 2.18
Tpm1-204ENSMUST00000113684 Kiaa1210E9Q0C6 1637 aa28.68■■■□□ 2.18
Tpm1-204ENSMUST00000113684 Rapgef6Q5NCJ1 1609 aa28.68■■■□□ 2.18
Tpm1-204ENSMUST00000113684 BlmO88700 1416 aa28.68■■■□□ 2.18
Tpm1-204ENSMUST00000113684 Lmo7E9PYF4 1699 aaKnown RBP28.66■■■□□ 2.18
Tpm1-204ENSMUST00000113684 Kif27Q7M6Z4 1394 aa28.65■■■□□ 2.18
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms