RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 MsnP26041 577 aaKnown RBP24■■□□□ 1.43
Trim71-201ENSMUST00000111816 Prdm10Q3UTQ7 1184 aa23.99■■□□□ 1.43
Trim71-201ENSMUST00000111816 Zcchc6Q5BLK4 1491 aaKnown RBP23.95■■□□□ 1.42
Trim71-201ENSMUST00000111816 Trim30dE9PWL0 497 aa23.93■■□□□ 1.42
Trim71-201ENSMUST00000111816 1700123L14RikQ3V2K7 440 aa23.87■■□□□ 1.41
Trim71-201ENSMUST00000111816 Ppm1gQ61074 542 aa23.86■■□□□ 1.41
Trim71-201ENSMUST00000111816 Ccer2J3QPU5 274 aa23.85■■□□□ 1.41
Trim71-201ENSMUST00000111816 Rangap1P46061 589 aaKnown RBP23.85■■□□□ 1.41
Trim71-201ENSMUST00000111816 Plcb2A3KGF7 1181 aa23.85■■□□□ 1.41
Trim71-201ENSMUST00000111816 Podxl2Q8CAE9 603 aa23.84■■□□□ 1.41
Trim71-201ENSMUST00000111816 Pknox2Q8BG99 474 aa23.83■■□□□ 1.4
Trim71-201ENSMUST00000111816 Casc1Q6TDU8 730 aa23.82■■□□□ 1.4
Trim71-201ENSMUST00000111816 Gm973E9Q295 1059 aa23.8■■□□□ 1.4
Trim71-201ENSMUST00000111816 Q8BT18 775 aa23.78■■□□□ 1.4
Trim71-201ENSMUST00000111816 Plekhg3Q4VAC9 1341 aa23.77■■□□□ 1.4
Trim71-201ENSMUST00000111816 Mapk8ip2Q9ERE9 830 aa23.76■■□□□ 1.39
Trim71-201ENSMUST00000111816 Lmod2Q3UHZ5 550 aa23.75■■□□□ 1.39
Trim71-201ENSMUST00000111816 Rad21Q61550 635 aaKnown RBP23.75■■□□□ 1.39
Trim71-201ENSMUST00000111816 Dcaf1Q80TR8 1506 aa23.74■■□□□ 1.39
Trim71-201ENSMUST00000111816 Rrp12Q6P5B0 1295 aaKnown RBP23.71■■□□□ 1.39
Trim71-201ENSMUST00000111816 Erich6bQ9D4S6 220 aa23.69■■□□□ 1.38
Trim71-201ENSMUST00000111816 Dnttip2Q8R2M2 758 aaKnown RBP23.67■■□□□ 1.38
Trim71-201ENSMUST00000111816 Map7O88735 730 aa23.67■■□□□ 1.38
Trim71-201ENSMUST00000111816 Sall2Q9QX96 1004 aa23.67■■□□□ 1.38
Trim71-201ENSMUST00000111816 Chmp4bQ9D8B3 224 aaKnown RBP23.65■■□□□ 1.38
Trim71-201ENSMUST00000111816 BccipQ9CWI3 316 aa23.65■■□□□ 1.38
Trim71-201ENSMUST00000111816 Taok2Q6ZQ29 1240 aa23.63■■□□□ 1.37
Trim71-201ENSMUST00000111816 4933402E13RikQ9D4D2 429 aa23.61■■□□□ 1.37
Trim71-201ENSMUST00000111816 PtmsQ9D0J8 101 aaKnown RBP23.59■■□□□ 1.37
Trim71-201ENSMUST00000111816 Wwc2Q6NXJ0 1187 aa23.59■■□□□ 1.37
Trim71-201ENSMUST00000111816 Dusp9Q7TNL7 452 aa23.58■■□□□ 1.37
Trim71-201ENSMUST00000111816 Arid4bA2CG63 1314 aaKnown RBP23.58■■□□□ 1.37
Trim71-201ENSMUST00000111816 CalrP14211 416 aaKnown RBP23.58■■□□□ 1.37
Trim71-201ENSMUST00000111816 Npm1Q61937 292 aaKnown RBP23.57■■□□□ 1.36
Trim71-201ENSMUST00000111816 Mrs2Q5NCE8 434 aa23.55■■□□□ 1.36
Trim71-201ENSMUST00000111816 RdxP26043 583 aaKnown RBP23.54■■□□□ 1.36
Trim71-201ENSMUST00000111816 Pes1Q9EQ61 584 aaKnown RBP23.54■■□□□ 1.36
Trim71-201ENSMUST00000111816 Cald1E9QA15 768 aaKnown RBP23.53■■□□□ 1.36
Trim71-201ENSMUST00000111816 Eid3Q3V124 375 aa23.5■■□□□ 1.35
Trim71-201ENSMUST00000111816 Ddrgk1Q80WW9 315 aa23.48■■□□□ 1.35
Trim71-201ENSMUST00000111816 MccE9PWI3 1003 aa23.45■■□□□ 1.35
Trim71-201ENSMUST00000111816 Gtf3c3Q3TMP1 882 aa23.45■■□□□ 1.35
Trim71-201ENSMUST00000111816 Fbxo2Q80UW2 297 aa23.45■■□□□ 1.34
Trim71-201ENSMUST00000111816 Trim26Q99PN3 545 aa23.44■■□□□ 1.34
Trim71-201ENSMUST00000111816 Ifnlr1Q8CGK5 535 aa23.42■■□□□ 1.34
Trim71-201ENSMUST00000111816 Ftsj3Q9DBE9 838 aaKnown RBP23.41■■□□□ 1.34
Trim71-201ENSMUST00000111816 Clstn2Q9ER65 966 aa23.39■■□□□ 1.34
Trim71-201ENSMUST00000111816 VgfQ0VGU4 617 aa23.38■■□□□ 1.33
Trim71-201ENSMUST00000111816 Kiaa0754Q69ZZ9 979 aa23.38■■□□□ 1.33
Trim71-201ENSMUST00000111816 Tpm3-rs7D3Z2H9 248 aa23.36■■□□□ 1.33
Trim71-201ENSMUST00000111816 KnstrnQ9D9Z1 312 aaKnown RBP23.36■■□□□ 1.33
Trim71-201ENSMUST00000111816 Becn1O88597 448 aa23.36■■□□□ 1.33
Trim71-201ENSMUST00000111816 Clip1Q922J3 1391 aa23.35■■□□□ 1.33
Trim71-201ENSMUST00000111816 Noc3lQ8VI84 807 aaKnown RBP23.34■■□□□ 1.33
Trim71-201ENSMUST00000111816 Zfp777B9EKF4 885 aa23.31■■□□□ 1.32
Trim71-201ENSMUST00000111816 Mbd3Q9Z2D8 285 aaKnown RBP23.31■■□□□ 1.32
Trim71-201ENSMUST00000111816 Ofd1Q80Z25 1017 aa23.31■■□□□ 1.32
Trim71-201ENSMUST00000111816 Trim30aP15533 496 aa23.3■■□□□ 1.32
Trim71-201ENSMUST00000111816 Clstn1Q9EPL2 979 aa23.3■■□□□ 1.32
Trim71-201ENSMUST00000111816 Ush1cQ9ES64 910 aa23.27■■□□□ 1.32
Trim71-201ENSMUST00000111816 Dnai2A2AC93 623 aa23.27■■□□□ 1.32
Trim71-201ENSMUST00000111816 Spryd3E9Q9B3 442 aa23.27■■□□□ 1.32
Trim71-201ENSMUST00000111816 Anapc15P60007 132 aa23.26■■□□□ 1.31
Trim71-201ENSMUST00000111816 Sh3bp5Q9Z131 463 aa23.25■■□□□ 1.31
Trim71-201ENSMUST00000111816 Pcmtd1P59913 357 aa23.25■■□□□ 1.31
Trim71-201ENSMUST00000111816 Gm6268A2A3U9 297 aa23.25■■□□□ 1.31
Trim71-201ENSMUST00000111816 Zrsr2Q62377 462 aaKnown RBP23.24■■□□□ 1.31
Trim71-201ENSMUST00000111816 Pde3bQ61409 1100 aa23.2■■□□□ 1.3
Trim71-201ENSMUST00000111816 Dnai1Q8C0M8 701 aa23.2■■□□□ 1.3
Trim71-201ENSMUST00000111816 Gm35339A0A140LHH9 1649 aa23.19■■□□□ 1.3
Trim71-201ENSMUST00000111816 Mapk8ip3Q9ESN9 1337 aa23.19■■□□□ 1.3
Trim71-201ENSMUST00000111816 Slc4a1apE9PX68 744 aa23.17■■□□□ 1.3
Trim71-201ENSMUST00000111816 Hsp90b1P08113 802 aaKnown RBP23.17■■□□□ 1.3
Trim71-201ENSMUST00000111816 Ipo9Q91YE6 1041 aa23.16■■□□□ 1.3
Trim71-201ENSMUST00000111816 Iqcf3Q9D498 203 aa23.16■■□□□ 1.3
Trim71-201ENSMUST00000111816 R3hcc1Q8BSI6 488 aa23.13■■□□□ 1.29
Trim71-201ENSMUST00000111816 Cwc15Q9JHS9 229 aaKnown RBP23.13■■□□□ 1.29
Trim71-201ENSMUST00000111816 Tpm3P21107 285 aaKnown RBP23.13■■□□□ 1.29
Trim71-201ENSMUST00000111816 Eif4g2Q62448 906 aaKnown RBP23.12■■□□□ 1.29
Trim71-201ENSMUST00000111816 Safb2Q80YR5 991 aaKnown RBP23.12■■□□□ 1.29
Trim71-201ENSMUST00000111816 IqubQ8CDK3 788 aa23.11■■□□□ 1.29
Trim71-201ENSMUST00000111816 Tcerg1Q8CGF7 1100 aaKnown RBP23.11■■□□□ 1.29
Trim71-201ENSMUST00000111816 NudcO35685 332 aaKnown RBP23.1■■□□□ 1.29
Trim71-201ENSMUST00000111816 Irx6Q9ER75 438 aa23.1■■□□□ 1.29
Trim71-201ENSMUST00000111816 Taf3Q5HZG4 932 aa23.1■■□□□ 1.29
Trim71-201ENSMUST00000111816 Ccdc34Q3UI66 367 aa23.1■■□□□ 1.29
Trim71-201ENSMUST00000111816 Prm3Q62100 101 aa23.09■■□□□ 1.29
Trim71-201ENSMUST00000111816 Cspp1B2RX88 1205 aa23.08■■□□□ 1.29
Trim71-201ENSMUST00000111816 P3h3Q8CG70 732 aa23.06■■□□□ 1.28
Trim71-201ENSMUST00000111816 HnrnpuQ8VEK3 800 aaKnown RBP23.06■■□□□ 1.28
Trim71-201ENSMUST00000111816 Pdcl3Q8BVF2 240 aa23.06■■□□□ 1.28
Trim71-201ENSMUST00000111816 Rassf8Q8CJ96 419 aa23.06■■□□□ 1.28
Trim71-201ENSMUST00000111816 Exosc9Q9JHI7 438 aaKnown RBP23.04■■□□□ 1.28
Trim71-201ENSMUST00000111816 Rtn4Q99P72 1162 aaKnown RBP23.03■■□□□ 1.28
Trim71-201ENSMUST00000111816 Cep164Q5DU05 1446 aa23.03■■□□□ 1.28
Trim71-201ENSMUST00000111816 Anp32eP97822 260 aaKnown RBP23.03■■□□□ 1.28
Trim71-201ENSMUST00000111816 Znf771Q8BJ90 317 aa23.03■■□□□ 1.28
Trim71-201ENSMUST00000111816 Plppr3Q7TPB0 716 aa23.01■■□□□ 1.27
Trim71-201ENSMUST00000111816 Smarce1O54941 411 aaKnown RBP23■■□□□ 1.27
Trim71-201ENSMUST00000111816 Cwc22Q8C5N3 908 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms