RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Pcf11G3X9Z4 1553 aa22.73■■□□□ 1.23
Trim11-203ENSMUST00000108810 Tiam1Q60610 1591 aa22.73■■□□□ 1.23
Trim11-203ENSMUST00000108810 Rad54l2Q99NG0 1466 aa22.69■■□□□ 1.22
Trim11-203ENSMUST00000108810 Urb2E9Q7L1 1524 aaKnown RBP22.67■■□□□ 1.22
Trim11-203ENSMUST00000108810 NefmP08553 848 aa22.65■■□□□ 1.22
Trim11-203ENSMUST00000108810 Polr1aO35134 1717 aaKnown RBP22.64■■□□□ 1.21
Trim11-203ENSMUST00000108810 Ncapd3Q6ZQK0 1506 aa22.64■■□□□ 1.21
Trim11-203ENSMUST00000108810 Pla2r1Q62028 1487 aa22.63■■□□□ 1.21
Trim11-203ENSMUST00000108810 Naip1Q9QWK5 1403 aa22.62■■□□□ 1.21
Trim11-203ENSMUST00000108810 Magi3Q9EQJ9 1476 aa22.62■■□□□ 1.21
Trim11-203ENSMUST00000108810 Plb1Q3TTY0 1478 aa22.61■■□□□ 1.21
Trim11-203ENSMUST00000108810 Slx4Q6P1D7 1565 aa22.61■■□□□ 1.21
Trim11-203ENSMUST00000108810 Ap3b1Q9Z1T1 1105 aa22.59■■□□□ 1.21
Trim11-203ENSMUST00000108810 Fyco1Q8VDC1 1437 aa22.59■■□□□ 1.21
Trim11-203ENSMUST00000108810 Peg3Q3URU2 1571 aa22.57■■□□□ 1.2
Trim11-203ENSMUST00000108810 Gpatch8A2A6A1 1505 aa22.56■■□□□ 1.2
Trim11-203ENSMUST00000108810 Rpap1Q80TE0 1409 aa22.54■■□□□ 1.2
Trim11-203ENSMUST00000108810 Disp1Q3TDN0 1521 aa22.54■■□□□ 1.2
Trim11-203ENSMUST00000108810 Grin2aP35436 1464 aa22.53■■□□□ 1.2
Trim11-203ENSMUST00000108810 EprsQ8CGC7 1512 aaKnown RBP22.53■■□□□ 1.2
Trim11-203ENSMUST00000108810 Setd1bQ8CFT2 1985 aa22.52■■□□□ 1.2
Trim11-203ENSMUST00000108810 CntlnA2AM05 1397 aa22.5■■□□□ 1.19
Trim11-203ENSMUST00000108810 Abca5Q8K448 1642 aa22.48■■□□□ 1.19
Trim11-203ENSMUST00000108810 Lrriq1Q0P5X1 1673 aa22.46■■□□□ 1.19
Trim11-203ENSMUST00000108810 Adamts12Q811B3 1600 aa22.46■■□□□ 1.19
Trim11-203ENSMUST00000108810 Pbrm1Q8BSQ9 1634 aaKnown RBP22.46■■□□□ 1.19
Trim11-203ENSMUST00000108810 BlmO88700 1416 aa22.44■■□□□ 1.18
Trim11-203ENSMUST00000108810 Ift140E9PY46 1464 aa22.44■■□□□ 1.18
Trim11-203ENSMUST00000108810 TchhA0A0B4J1F9 1599 aa22.43■■□□□ 1.18
Trim11-203ENSMUST00000108810 CadpsQ80TJ1 1355 aa22.41■■□□□ 1.18
Trim11-203ENSMUST00000108810 Nup160Q9Z0W3 1402 aaKnown RBP22.4■■□□□ 1.18
Trim11-203ENSMUST00000108810 Kdm5bQ80Y84 1544 aa22.4■■□□□ 1.18
Trim11-203ENSMUST00000108810 WizO88286 1684 aaKnown RBP22.4■■□□□ 1.18
Trim11-203ENSMUST00000108810 Gm1043A0A140LJC2 1431 aa22.37■■□□□ 1.17
Trim11-203ENSMUST00000108810 Gm7298A0A0N4SVU1 1476 aa22.37■■□□□ 1.17
Trim11-203ENSMUST00000108810 Aebp1Q640N1 1128 aa22.37■■□□□ 1.17
Trim11-203ENSMUST00000108810 Abca16E9PWJ7 1678 aa22.33■■□□□ 1.17
Trim11-203ENSMUST00000108810 Pcgf6Q99NA9 353 aa22.3■■□□□ 1.16
Trim11-203ENSMUST00000108810 Soga1E1U8D0 1418 aa22.3■■□□□ 1.16
Trim11-203ENSMUST00000108810 PxdnQ3UQ28 1475 aa22.3■■□□□ 1.16
Trim11-203ENSMUST00000108810 3425401B19RikD3Z1D3 1412 aa22.26■■□□□ 1.15
Trim11-203ENSMUST00000108810 Lmod2Q3UHZ5 550 aa22.23■■□□□ 1.15
Trim11-203ENSMUST00000108810 Cc2d2bA0A286YDU8 1405 aa22.21■■□□□ 1.15
Trim11-203ENSMUST00000108810 Supt5hO55201 1082 aaKnown RBP22.19■■□□□ 1.14
Trim11-203ENSMUST00000108810 Lmtk2Q3TYD6 1471 aa22.19■■□□□ 1.14
Trim11-203ENSMUST00000108810 Abcc2Q8VI47 1543 aa22.19■■□□□ 1.14
Trim11-203ENSMUST00000108810 Rusc2Q80U22 1514 aa22.15■■□□□ 1.14
Trim11-203ENSMUST00000108810 Kif27Q7M6Z4 1394 aa22.14■■□□□ 1.13
Trim11-203ENSMUST00000108810 Eif4g3Q80XI3 1579 aaKnown RBP22.12■■□□□ 1.13
Trim11-203ENSMUST00000108810 Gcc2Q8CHG3 1679 aa22.12■■□□□ 1.13
Trim11-203ENSMUST00000108810 BC005561E9Q5E2 1589 aa22.1■■□□□ 1.13
Trim11-203ENSMUST00000108810 Shroom2A2ALU4 1481 aa22.08■■□□□ 1.12
Trim11-203ENSMUST00000108810 NexmifQ5DTT1 1515 aa22.07■■□□□ 1.12
Trim11-203ENSMUST00000108810 WrnO09053 1401 aa22.07■■□□□ 1.12
Trim11-203ENSMUST00000108810 Rapgef6Q5NCJ1 1609 aa22.06■■□□□ 1.12
Trim11-203ENSMUST00000108810 Ccnb3Q810T2 1396 aa22.05■■□□□ 1.12
Trim11-203ENSMUST00000108810 Fhad1A6PWD2 1420 aa22.04■■□□□ 1.12
Trim11-203ENSMUST00000108810 Naip2Q9QUK4 1447 aa22.04■■□□□ 1.12
Trim11-203ENSMUST00000108810 A2mQ6GQT1 1474 aa22.04■■□□□ 1.12
Trim11-203ENSMUST00000108810 Map3k4O08648 1597 aa22.02■■□□□ 1.12
Trim11-203ENSMUST00000108810 TonslQ6NZL6 1363 aa22.02■■□□□ 1.12
Trim11-203ENSMUST00000108810 Las1lA2BE28 776 aaKnown RBP22■■□□□ 1.11
Trim11-203ENSMUST00000108810 Mia2Q91ZV0 1396 aa21.99■■□□□ 1.11
Trim11-203ENSMUST00000108810 Vps8Q0P5W1 1427 aa21.99■■□□□ 1.11
Trim11-203ENSMUST00000108810 Arhgef11Q68FM7 1552 aa21.97■■□□□ 1.11
Trim11-203ENSMUST00000108810 Dnmt1P13864 1620 aaKnown RBP21.97■■□□□ 1.11
Trim11-203ENSMUST00000108810 Mug1P28665 1476 aa21.97■■□□□ 1.11
Trim11-203ENSMUST00000108810 Arhgap27A2AB59 869 aa21.96■■□□□ 1.11
Trim11-203ENSMUST00000108810 Zcchc11B2RX14 1644 aaKnown RBP21.96■■□□□ 1.11
Trim11-203ENSMUST00000108810 Fam50aQ9WV03 339 aaKnown RBP21.96■■□□□ 1.11
Trim11-203ENSMUST00000108810 Ncoa3O09000 1398 aa21.95■■□□□ 1.1
Trim11-203ENSMUST00000108810 Cdc42bpaQ3UU96 1719 aa21.94■■□□□ 1.1
Trim11-203ENSMUST00000108810 Kiaa1551Q5DTW7 1521 aa21.9■■□□□ 1.1
Trim11-203ENSMUST00000108810 Sall2Q9QX96 1004 aa21.89■■□□□ 1.1
Trim11-203ENSMUST00000108810 Dennd4bQ3U1Y4 1499 aa21.89■■□□□ 1.09
Trim11-203ENSMUST00000108810 Aebp2Q9Z248 504 aaKnown RBP21.88■■□□□ 1.09
Trim11-203ENSMUST00000108810 Eid3Q3V124 375 aa21.87■■□□□ 1.09
Trim11-203ENSMUST00000108810 Mroh2aD3Z750 1679 aa21.86■■□□□ 1.09
Trim11-203ENSMUST00000108810 Arhgap31A6X8Z5 1425 aa21.86■■□□□ 1.09
Trim11-203ENSMUST00000108810 Ankrd36D3Z4K0 1415 aa21.83■■□□□ 1.09
Trim11-203ENSMUST00000108810 UacaQ8CGB3 1411 aa21.83■■□□□ 1.09
Trim11-203ENSMUST00000108810 Ccdc141E9Q8Q6 1531 aa21.82■■□□□ 1.08
Trim11-203ENSMUST00000108810 Ncoa2Q61026 1462 aa21.82■■□□□ 1.08
Trim11-203ENSMUST00000108810 Arhgef40Q3UPH7 1517 aa21.81■■□□□ 1.08
Trim11-203ENSMUST00000108810 Fhod3Q76LL6 1578 aa21.81■■□□□ 1.08
Trim11-203ENSMUST00000108810 Neo1P97798 1493 aa21.81■■□□□ 1.08
Trim11-203ENSMUST00000108810 Adcy10Q8C0T9 1614 aa21.79■■□□□ 1.08
Trim11-203ENSMUST00000108810 Arhgef12Q8R4H2 1543 aaKnown RBP21.79■■□□□ 1.08
Trim11-203ENSMUST00000108810 Ccer2J3QPU5 274 aa21.79■■□□□ 1.08
Trim11-203ENSMUST00000108810 Magi1Q6RHR9 1471 aa21.79■■□□□ 1.08
Trim11-203ENSMUST00000108810 Kdm6bQ5NCY0 1641 aa21.78■■□□□ 1.08
Trim11-203ENSMUST00000108810 Rrbp1Q99PL5 1605 aaKnown RBP21.78■■□□□ 1.08
Trim11-203ENSMUST00000108810 Rfx7F8VPJ6 1459 aa21.78■■□□□ 1.08
Trim11-203ENSMUST00000108810 Mapkbp1Q6NS57 1503 aa21.78■■□□□ 1.08
Trim11-203ENSMUST00000108810 Fgd6Q69ZL1 1399 aa21.76■■□□□ 1.07
Trim11-203ENSMUST00000108810 Abcc5Q9R1X5 1436 aa21.75■■□□□ 1.07
Trim11-203ENSMUST00000108810 Cul7Q8VE73 1689 aa21.75■■□□□ 1.07
Trim11-203ENSMUST00000108810 Prex2Q3LAC4 1598 aa21.73■■□□□ 1.07
Trim11-203ENSMUST00000108810 Dhx57Q6P5D3 1388 aaKnown RBP21.73■■□□□ 1.07
Trim11-203ENSMUST00000108810 ClspnQ80YR7 1315 aa21.72■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 120.4 ms