RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 NischQ80TM9 1593 aa30.51■■■□□ 2.47
Trim11-203ENSMUST00000108810 Gm35339A0A140LHH9 1649 aa30.42■■■□□ 2.46
Trim11-203ENSMUST00000108810 Abcc9P70170 1546 aa29.7■■■□□ 2.35
Trim11-203ENSMUST00000108810 Abcc8B2RUS7 1588 aa29.16■■■□□ 2.26
Trim11-203ENSMUST00000108810 Rhox8Q6VSS7 320 aa27.46■■□□□ 1.99
Trim11-203ENSMUST00000108810 ScribQ80U72 1612 aa27.46■■□□□ 1.99
Trim11-203ENSMUST00000108810 Dcaf1Q80TR8 1506 aa27.18■■□□□ 1.94
Trim11-203ENSMUST00000108810 Rtl1Q7M732 1744 aa27.08■■□□□ 1.92
Trim11-203ENSMUST00000108810 Kdm5dQ62240 1548 aa26.79■■□□□ 1.88
Trim11-203ENSMUST00000108810 Rb1cc1Q9ESK9 1588 aa26.72■■□□□ 1.87
Trim11-203ENSMUST00000108810 NacadQ5SWP3 1504 aa26.61■■□□□ 1.85
Trim11-203ENSMUST00000108810 Ccdc180J3QNE4 1664 aa26.57■■□□□ 1.84
Trim11-203ENSMUST00000108810 Baz1aO88379 1555 aa26.41■■□□□ 1.82
Trim11-203ENSMUST00000108810 Zcchc6Q5BLK4 1491 aaKnown RBP26.27■■□□□ 1.8
Trim11-203ENSMUST00000108810 Sycp2Q9CUU3 1500 aa26.07■■□□□ 1.76
Trim11-203ENSMUST00000108810 Crybg2B7ZCC2 1516 aa26.05■■□□□ 1.76
Trim11-203ENSMUST00000108810 Smarca2Q6DIC0 1577 aa25.82■■□□□ 1.72
Trim11-203ENSMUST00000108810 BicraF8VPZ9 1578 aa25.58■■□□□ 1.69
Trim11-203ENSMUST00000108810 Ccdc136Q3TVA9 1136 aa25.53■■□□□ 1.68
Trim11-203ENSMUST00000108810 Cecr2E9Q2Z1 1453 aa25.21■■□□□ 1.63
Trim11-203ENSMUST00000108810 Trim41Q5NCC3 630 aa25.12■■□□□ 1.61
Trim11-203ENSMUST00000108810 HrcG5E8J6 738 aa25.1■■□□□ 1.61
Trim11-203ENSMUST00000108810 Brd4Q9ESU6 1400 aaKnown RBP25.04■■□□□ 1.6
Trim11-203ENSMUST00000108810 Synj1Q8CHC4 1574 aa24.95■■□□□ 1.58
Trim11-203ENSMUST00000108810 Smarca4Q3TKT4 1613 aaKnown RBP24.84■■□□□ 1.57
Trim11-203ENSMUST00000108810 CftrP26361 1476 aa24.83■■□□□ 1.57
Trim11-203ENSMUST00000108810 Cttnbp2B9EJA2 1648 aa24.78■■□□□ 1.56
Trim11-203ENSMUST00000108810 Golga3P55937 1487 aa24.66■■□□□ 1.54
Trim11-203ENSMUST00000108810 Cep164Q5DU05 1446 aa24.61■■□□□ 1.53
Trim11-203ENSMUST00000108810 Top2bQ64511 1612 aa24.56■■□□□ 1.52
Trim11-203ENSMUST00000108810 Iqgap2Q3UQ44 1575 aa24.55■■□□□ 1.52
Trim11-203ENSMUST00000108810 Atad2bE9Q166 1460 aaKnown RBP24.5■■□□□ 1.51
Trim11-203ENSMUST00000108810 Rsf1E9PWW9 1441 aaKnown RBP24.49■■□□□ 1.51
Trim11-203ENSMUST00000108810 Cngb1E1AZ71 1325 aa24.46■■□□□ 1.51
Trim11-203ENSMUST00000108810 Pds5bQ4VA53 1446 aaKnown RBP24.43■■□□□ 1.5
Trim11-203ENSMUST00000108810 Ccdc88bQ4QRL3 1481 aa24.4■■□□□ 1.5
Trim11-203ENSMUST00000108810 Chic1Q8CBW7 227 aa24.33■■□□□ 1.49
Trim11-203ENSMUST00000108810 Esf1Q3V1V3 845 aaKnown RBP24.31■■□□□ 1.48
Trim11-203ENSMUST00000108810 Cc2d2aQ8CFW7 1633 aa24.28■■□□□ 1.48
Trim11-203ENSMUST00000108810 Wdr62Q3U3T8 1523 aa24.14■■□□□ 1.46
Trim11-203ENSMUST00000108810 Fmn1Q05860 1466 aa24.12■■□□□ 1.45
Trim11-203ENSMUST00000108810 Frmpd1A2AKB4 1549 aa24.11■■□□□ 1.45
Trim11-203ENSMUST00000108810 Top2aQ01320 1528 aaKnown RBP23.98■■□□□ 1.43
Trim11-203ENSMUST00000108810 TnnQ80Z71 1560 aa23.97■■□□□ 1.43
Trim11-203ENSMUST00000108810 Ercc6F8VPZ5 1481 aa23.96■■□□□ 1.43
Trim11-203ENSMUST00000108810 Unc13aQ4KUS2 1712 aa23.94■■□□□ 1.42
Trim11-203ENSMUST00000108810 Gab3Q8BSM5 595 aa23.89■■□□□ 1.41
Trim11-203ENSMUST00000108810 Thoc2B1AZI6 1594 aaKnown RBP23.88■■□□□ 1.41
Trim11-203ENSMUST00000108810 Ehmt2Q9Z148 1263 aaKnown RBP23.83■■□□□ 1.4
Trim11-203ENSMUST00000108810 Lamc3Q9R0B6 1581 aa23.82■■□□□ 1.4
Trim11-203ENSMUST00000108810 Rapgef2Q8CHG7 1496 aa23.76■■□□□ 1.39
Trim11-203ENSMUST00000108810 Rpgrip1Q9EPQ2 1331 aa23.73■■□□□ 1.39
Trim11-203ENSMUST00000108810 Acin1Q9JIX8 1338 aaKnown RBP23.71■■□□□ 1.39
Trim11-203ENSMUST00000108810 Kif15Q6P9L6 1387 aa23.59■■□□□ 1.37
Trim11-203ENSMUST00000108810 Phldb1Q6PDH0 1371 aaKnown RBP23.57■■□□□ 1.36
Trim11-203ENSMUST00000108810 Fam135aQ6NS59 1506 aa23.57■■□□□ 1.36
Trim11-203ENSMUST00000108810 Eif4g1Q6NZJ6 1600 aaKnown RBP23.57■■□□□ 1.36
Trim11-203ENSMUST00000108810 Camsap1A2AHC3 1581 aa23.56■■□□□ 1.36
Trim11-203ENSMUST00000108810 Cep162Q6ZQ06 1403 aa23.53■■□□□ 1.36
Trim11-203ENSMUST00000108810 NrkQ9R0G8 1455 aa23.39■■□□□ 1.33
Trim11-203ENSMUST00000108810 PtprkP35822 1457 aa23.38■■□□□ 1.33
Trim11-203ENSMUST00000108810 Ccdc18Q640L5 1455 aa23.36■■□□□ 1.33
Trim11-203ENSMUST00000108810 Shroom4Q1W617 1475 aa23.33■■□□□ 1.33
Trim11-203ENSMUST00000108810 Grin2bQ01097 1482 aa23.33■■□□□ 1.32
Trim11-203ENSMUST00000108810 Cux2P70298 1426 aa23.31■■□□□ 1.32
Trim11-203ENSMUST00000108810 Arhgap35Q91YM2 1499 aa23.3■■□□□ 1.32
Trim11-203ENSMUST00000108810 Npm2Q80W85 207 aa23.26■■□□□ 1.31
Trim11-203ENSMUST00000108810 Ubl4bQ9CQ84 188 aa23.26■■□□□ 1.31
Trim11-203ENSMUST00000108810 Il27Q8K3I6 234 aa23.24■■□□□ 1.31
Trim11-203ENSMUST00000108810 Map3k1P53349 1493 aa23.19■■□□□ 1.3
Trim11-203ENSMUST00000108810 Baz1bQ9Z277 1479 aa23.17■■□□□ 1.3
Trim11-203ENSMUST00000108810 Myt1lP97500 1187 aa23.15■■□□□ 1.3
Trim11-203ENSMUST00000108810 LrpprcQ6PB66 1392 aaKnown RBP23.08■■□□□ 1.29
Trim11-203ENSMUST00000108810 Mroh2bQ7M6Y6 1581 aa23.08■■□□□ 1.29
Trim11-203ENSMUST00000108810 PogzQ8BZH4 1409 aaKnown RBP23.07■■□□□ 1.28
Trim11-203ENSMUST00000108810 Efcab5A0JP43 1406 aa23.04■■□□□ 1.28
Trim11-203ENSMUST00000108810 Npm1Q61937 292 aaKnown RBP23.04■■□□□ 1.28
Trim11-203ENSMUST00000108810 Duox2A2AQ99 1517 aa23.01■■□□□ 1.27
Trim11-203ENSMUST00000108810 AqrQ8CFQ3 1481 aaKnown RBP23■■□□□ 1.27
Trim11-203ENSMUST00000108810 Clip1Q922J3 1391 aa22.99■■□□□ 1.27
Trim11-203ENSMUST00000108810 Dnajc5bQ9CQ94 199 aa22.98■■□□□ 1.27
Trim11-203ENSMUST00000108810 Mrc2Q64449 1479 aa22.98■■□□□ 1.27
Trim11-203ENSMUST00000108810 Arap1Q4LDD4 1452 aa22.94■■□□□ 1.26
Trim11-203ENSMUST00000108810 Kif21aQ9QXL2 1672 aa22.94■■□□□ 1.26
Trim11-203ENSMUST00000108810 Samd9lQ69Z37 1561 aa22.93■■□□□ 1.26
Trim11-203ENSMUST00000108810 Eea1Q8BL66 1411 aa22.92■■□□□ 1.26
Trim11-203ENSMUST00000108810 Dhx29Q6PGC1 1365 aaKnown RBP22.91■■□□□ 1.26
Trim11-203ENSMUST00000108810 Erich3F6QRE9 1637 aa22.91■■□□□ 1.26
Trim11-203ENSMUST00000108810 Ankrd26Q811D2 1581 aa22.88■■□□□ 1.25
Trim11-203ENSMUST00000108810 Mier1Q5UAK0 511 aa22.88■■□□□ 1.25
Trim11-203ENSMUST00000108810 Arhgef5E9Q7D5 1581 aa22.86■■□□□ 1.25
Trim11-203ENSMUST00000108810 Crocc2F6XLV1 1638 aa22.86■■□□□ 1.25
Trim11-203ENSMUST00000108810 SynmQ70IV5 1561 aa22.84■■□□□ 1.25
Trim11-203ENSMUST00000108810 Carmil1Q6EDY6 1374 aa22.81■■□□□ 1.24
Trim11-203ENSMUST00000108810 Setd5Q5XJV7 1441 aa22.81■■□□□ 1.24
Trim11-203ENSMUST00000108810 Zeb1Q64318 1117 aa22.79■■□□□ 1.24
Trim11-203ENSMUST00000108810 UbtfP25976 765 aaKnown RBP22.77■■□□□ 1.24
Trim11-203ENSMUST00000108810 Cux1P53564 1515 aa22.76■■□□□ 1.23
Trim11-203ENSMUST00000108810 Lmo7E9PYF4 1699 aaKnown RBP22.75■■□□□ 1.23
Trim11-203ENSMUST00000108810 Plekhg3Q4VAC9 1341 aa22.73■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 272.8 ms