RNA–Protein interactions for RNA: ENSMUST00000075141.6

Trim17-202, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim17, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-202ENSMUST00000075141 BlmO88700 1416 aa13□□□□□ -0.33
Trim17-202ENSMUST00000075141 Sin3aQ60520 1274 aaKnown RBP13□□□□□ -0.33
Trim17-202ENSMUST00000075141 Ttbk1Q6PCN3 1308 aa12.99□□□□□ -0.33
Trim17-202ENSMUST00000075141 Ppp4r2Q0VGB7 417 aa12.98□□□□□ -0.33
Trim17-202ENSMUST00000075141 Smarca4Q3TKT4 1613 aaKnown RBP12.97□□□□□ -0.33
Trim17-202ENSMUST00000075141 PtprkP35822 1457 aa12.97□□□□□ -0.33
Trim17-202ENSMUST00000075141 Arhgap35Q91YM2 1499 aa12.96□□□□□ -0.33
Trim17-202ENSMUST00000075141 Baz1bQ9Z277 1479 aa12.96□□□□□ -0.33
Trim17-202ENSMUST00000075141 P3h3Q8CG70 732 aa12.95□□□□□ -0.34
Trim17-202ENSMUST00000075141 Supt16hQ920B9 1047 aa12.92□□□□□ -0.34
Trim17-202ENSMUST00000075141 Kdm5bQ80Y84 1544 aa12.92□□□□□ -0.34
Trim17-202ENSMUST00000075141 Eif4g1Q6NZJ6 1600 aaKnown RBP12.88□□□□□ -0.35
Trim17-202ENSMUST00000075141 Ccdc18Q640L5 1455 aa12.88□□□□□ -0.35
Trim17-202ENSMUST00000075141 Arhgef5E9Q7D5 1581 aa12.87□□□□□ -0.35
Trim17-202ENSMUST00000075141 AqrQ8CFQ3 1481 aaKnown RBP12.87□□□□□ -0.35
Trim17-202ENSMUST00000075141 Pelp1Q9DBD5 1123 aaKnown RBP12.86□□□□□ -0.35
Trim17-202ENSMUST00000075141 Wdr43Q6ZQL4 677 aaKnown RBP12.85□□□□□ -0.35
Trim17-202ENSMUST00000075141 Gm13697A2AK42 830 aa12.85□□□□□ -0.35
Trim17-202ENSMUST00000075141 Chic2Q9D9G3 165 aa12.85□□□□□ -0.35
Trim17-202ENSMUST00000075141 Slc4a3P16283 1227 aa12.83□□□□□ -0.36
Trim17-202ENSMUST00000075141 Mrs2Q5NCE8 434 aa12.82□□□□□ -0.36
Trim17-202ENSMUST00000075141 Pak3Q61036 559 aa12.81□□□□□ -0.36
Trim17-202ENSMUST00000075141 Naip1Q9QWK5 1403 aa12.81□□□□□ -0.36
Trim17-202ENSMUST00000075141 Iqgap2Q3UQ44 1575 aa12.8□□□□□ -0.36
Trim17-202ENSMUST00000075141 Rtl5Q5DTT4 599 aa12.79□□□□□ -0.36
Trim17-202ENSMUST00000075141 Wwc2Q6NXJ0 1187 aa12.78□□□□□ -0.36
Trim17-202ENSMUST00000075141 Smg6P61406 1418 aaKnown RBP12.78□□□□□ -0.36
Trim17-202ENSMUST00000075141 Tiam1Q60610 1591 aa12.77□□□□□ -0.36
Trim17-202ENSMUST00000075141 Kif15Q6P9L6 1387 aa12.76□□□□□ -0.37
Trim17-202ENSMUST00000075141 NrdcQ8BHG1 1161 aa12.75□□□□□ -0.37
Trim17-202ENSMUST00000075141 NrkQ9R0G8 1455 aa12.74□□□□□ -0.37
Trim17-202ENSMUST00000075141 Dhx29Q6PGC1 1365 aaKnown RBP12.72□□□□□ -0.37
Trim17-202ENSMUST00000075141 Slx4Q6P1D7 1565 aa12.72□□□□□ -0.37
Trim17-202ENSMUST00000075141 3425401B19RikD3Z1D3 1412 aa12.71□□□□□ -0.37
Trim17-202ENSMUST00000075141 TchhA0A0B4J1F9 1599 aa12.71□□□□□ -0.38
Trim17-202ENSMUST00000075141 UacaQ8CGB3 1411 aa12.7□□□□□ -0.38
Trim17-202ENSMUST00000075141 Shroom4Q1W617 1475 aa12.7□□□□□ -0.38
Trim17-202ENSMUST00000075141 Ccer2J3QPU5 274 aa12.69□□□□□ -0.38
Trim17-202ENSMUST00000075141 Washc2Q6PGL7 1334 aa12.69□□□□□ -0.38
Trim17-202ENSMUST00000075141 Exoc6Q8R313 802 aa12.68□□□□□ -0.38
Trim17-202ENSMUST00000075141 Slc4a2P13808 1237 aaKnown RBP12.68□□□□□ -0.38
Trim17-202ENSMUST00000075141 Pcf11G3X9Z4 1553 aa12.67□□□□□ -0.38
Trim17-202ENSMUST00000075141 Kcnh8P59111 1102 aa12.67□□□□□ -0.38
Trim17-202ENSMUST00000075141 Liat1Q810M6 228 aa12.67□□□□□ -0.38
Trim17-202ENSMUST00000075141 Plppr3Q7TPB0 716 aa12.66□□□□□ -0.38
Trim17-202ENSMUST00000075141 Ankrd26Q811D2 1581 aa12.65□□□□□ -0.39
Trim17-202ENSMUST00000075141 Mia2Q91ZV0 1396 aa12.64□□□□□ -0.39
Trim17-202ENSMUST00000075141 TnnQ80Z71 1560 aa12.63□□□□□ -0.39
Trim17-202ENSMUST00000075141 Fhad1A6PWD2 1420 aa12.62□□□□□ -0.39
Trim17-202ENSMUST00000075141 Mroh2bQ7M6Y6 1581 aa12.61□□□□□ -0.39
Trim17-202ENSMUST00000075141 Ankrd36D3Z4K0 1415 aa12.61□□□□□ -0.39
Trim17-202ENSMUST00000075141 Aebp1Q640N1 1128 aa12.61□□□□□ -0.39
Trim17-202ENSMUST00000075141 Fyco1Q8VDC1 1437 aa12.6□□□□□ -0.39
Trim17-202ENSMUST00000075141 Egfem1Q8C088 590 aa12.6□□□□□ -0.39
Trim17-202ENSMUST00000075141 Hdac5Q9Z2V6 1113 aa12.6□□□□□ -0.39
Trim17-202ENSMUST00000075141 CntlnA2AM05 1397 aa12.6□□□□□ -0.39
Trim17-202ENSMUST00000075141 Map3k1P53349 1493 aa12.6□□□□□ -0.39
Trim17-202ENSMUST00000075141 Fgd1P52734 960 aa12.59□□□□□ -0.39
Trim17-202ENSMUST00000075141 Atad2bE9Q166 1460 aaKnown RBP12.59□□□□□ -0.39
Trim17-202ENSMUST00000075141 Ofd1Q80Z25 1017 aa12.58□□□□□ -0.4
Trim17-202ENSMUST00000075141 Vps8Q0P5W1 1427 aa12.57□□□□□ -0.4
Trim17-202ENSMUST00000075141 Naip5Q9R016 1403 aa12.57□□□□□ -0.4
Trim17-202ENSMUST00000075141 Arhgap27A2AB59 869 aa12.57□□□□□ -0.4
Trim17-202ENSMUST00000075141 Mphosph9A6H5Y1 991 aa12.57□□□□□ -0.4
Trim17-202ENSMUST00000075141 Zbtb4Q5F293 982 aa12.57□□□□□ -0.4
Trim17-202ENSMUST00000075141 Cux1P53564 1515 aa12.57□□□□□ -0.4
Trim17-202ENSMUST00000075141 Npm1Q61937 292 aaKnown RBP12.56□□□□□ -0.4
Trim17-202ENSMUST00000075141 Camsap1A2AHC3 1581 aa12.55□□□□□ -0.4
Trim17-202ENSMUST00000075141 Naip2Q9QUK4 1447 aa12.55□□□□□ -0.4
Trim17-202ENSMUST00000075141 Zfp644E9QA22 1323 aa12.55□□□□□ -0.4
Trim17-202ENSMUST00000075141 Ccdc27Q3V036 639 aa12.55□□□□□ -0.4
Trim17-202ENSMUST00000075141 Upf2A2AT37 1269 aaKnown RBP12.54□□□□□ -0.4
Trim17-202ENSMUST00000075141 Pknox2Q8BG99 474 aa12.54□□□□□ -0.4
Trim17-202ENSMUST00000075141 Grin2bQ01097 1482 aa12.54□□□□□ -0.4
Trim17-202ENSMUST00000075141 Frmpd1A2AKB4 1549 aa12.53□□□□□ -0.4
Trim17-202ENSMUST00000075141 Gm7298A0A0N4SVU1 1476 aa12.53□□□□□ -0.4
Trim17-202ENSMUST00000075141 Ncoa2Q61026 1462 aa12.53□□□□□ -0.4
Trim17-202ENSMUST00000075141 Erich3F6QRE9 1637 aa12.52□□□□□ -0.4
Trim17-202ENSMUST00000075141 Gm13695A2AK44 830 aa12.52□□□□□ -0.4
Trim17-202ENSMUST00000075141 A2mQ6GQT1 1474 aa12.52□□□□□ -0.41
Trim17-202ENSMUST00000075141 Phf23Q8BSN5 401 aa12.52□□□□□ -0.41
Trim17-202ENSMUST00000075141 Ccnb3Q810T2 1396 aa12.51□□□□□ -0.41
Trim17-202ENSMUST00000075141 Pkd2O35245 966 aa12.51□□□□□ -0.41
Trim17-202ENSMUST00000075141 Efcab5A0JP43 1406 aa12.51□□□□□ -0.41
Trim17-202ENSMUST00000075141 ChgaP26339 463 aaKnown RBP12.5□□□□□ -0.41
Trim17-202ENSMUST00000075141 Rgl3Q3UYI5 709 aa12.5□□□□□ -0.41
Trim17-202ENSMUST00000075141 Lamc3Q9R0B6 1581 aa12.5□□□□□ -0.41
Trim17-202ENSMUST00000075141 4933416C03RikQ3V063 378 aa12.5□□□□□ -0.41
Trim17-202ENSMUST00000075141 Cabp1Q9JLK7 227 aa12.49□□□□□ -0.41
Trim17-202ENSMUST00000075141 L3mbtl2P59178 703 aa12.49□□□□□ -0.41
Trim17-202ENSMUST00000075141 Carmil1Q6EDY6 1374 aa12.49□□□□□ -0.41
Trim17-202ENSMUST00000075141 DaxxO35613 739 aa12.48□□□□□ -0.41
Trim17-202ENSMUST00000075141 Rad21Q61550 635 aaKnown RBP12.48□□□□□ -0.41
Trim17-202ENSMUST00000075141 Ipo9Q91YE6 1041 aa12.48□□□□□ -0.41
Trim17-202ENSMUST00000075141 Usp47Q8BY87 1376 aa12.48□□□□□ -0.41
Trim17-202ENSMUST00000075141 PnisrA2AJT4 805 aaKnown RBP12.47□□□□□ -0.41
Trim17-202ENSMUST00000075141 Lmo7E9PYF4 1699 aaKnown RBP12.46□□□□□ -0.41
Trim17-202ENSMUST00000075141 Pds5bQ4VA53 1446 aaKnown RBP12.46□□□□□ -0.42
Trim17-202ENSMUST00000075141 Gm1043A0A140LJC2 1431 aa12.45□□□□□ -0.42
Trim17-202ENSMUST00000075141 Tcerg1Q8CGF7 1100 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms