RNA–Protein interactions for RNA: ENSMUST00000075141.6

Trim17-202, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim17, Length 3,028 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-202ENSMUST00000075141 NischQ80TM9 1593 aa16.36■□□□□ 0.21
Trim17-202ENSMUST00000075141 Rhox8Q6VSS7 320 aa16.23■□□□□ 0.19
Trim17-202ENSMUST00000075141 Abcc9P70170 1546 aa15.76■□□□□ 0.11
Trim17-202ENSMUST00000075141 Ehmt2Q9Z148 1263 aaKnown RBP15.6■□□□□ 0.09
Trim17-202ENSMUST00000075141 Rpgrip1Q9EPQ2 1331 aa15.53■□□□□ 0.08
Trim17-202ENSMUST00000075141 Gm35339A0A140LHH9 1649 aa15.47■□□□□ 0.07
Trim17-202ENSMUST00000075141 Rtl1Q7M732 1744 aa15.43■□□□□ 0.06
Trim17-202ENSMUST00000075141 Ccdc180J3QNE4 1664 aa15.42■□□□□ 0.06
Trim17-202ENSMUST00000075141 Abcc8B2RUS7 1588 aa15.33■□□□□ 0.04
Trim17-202ENSMUST00000075141 Acin1Q9JIX8 1338 aaKnown RBP15.3■□□□□ 0.04
Trim17-202ENSMUST00000075141 Pcgf6Q99NA9 353 aa15.07■□□□□ 0
Trim17-202ENSMUST00000075141 Ccdc136Q3TVA9 1136 aa15.02■□□□□ -0
Trim17-202ENSMUST00000075141 Zcchc6Q5BLK4 1491 aaKnown RBP14.97□□□□□ -0.01
Trim17-202ENSMUST00000075141 HrcG5E8J6 738 aa14.8□□□□□ -0.04
Trim17-202ENSMUST00000075141 Supt5hO55201 1082 aaKnown RBP14.79□□□□□ -0.04
Trim17-202ENSMUST00000075141 Dcaf1Q80TR8 1506 aa14.72□□□□□ -0.05
Trim17-202ENSMUST00000075141 Trim41Q5NCC3 630 aa14.72□□□□□ -0.05
Trim17-202ENSMUST00000075141 Zeb1Q64318 1117 aa14.6□□□□□ -0.07
Trim17-202ENSMUST00000075141 Neurod1Q60867 357 aa14.55□□□□□ -0.08
Trim17-202ENSMUST00000075141 Gab3Q8BSM5 595 aa14.46□□□□□ -0.09
Trim17-202ENSMUST00000075141 Rb1cc1Q9ESK9 1588 aa14.38□□□□□ -0.11
Trim17-202ENSMUST00000075141 Cngb1E1AZ71 1325 aa14.35□□□□□ -0.11
Trim17-202ENSMUST00000075141 Sall2Q9QX96 1004 aa14.26□□□□□ -0.13
Trim17-202ENSMUST00000075141 Mier1Q5UAK0 511 aa14.24□□□□□ -0.13
Trim17-202ENSMUST00000075141 Cep164Q5DU05 1446 aa14.21□□□□□ -0.13
Trim17-202ENSMUST00000075141 Chic1Q8CBW7 227 aa14.21□□□□□ -0.13
Trim17-202ENSMUST00000075141 Ppargc1bQ8VHJ7 1014 aa14.17□□□□□ -0.14
Trim17-202ENSMUST00000075141 Las1lA2BE28 776 aaKnown RBP14.17□□□□□ -0.14
Trim17-202ENSMUST00000075141 Wdr66E9Q743 1299 aa14.15□□□□□ -0.14
Trim17-202ENSMUST00000075141 Csrnp3P59055 597 aa14.14□□□□□ -0.15
Trim17-202ENSMUST00000075141 NefmP08553 848 aa14.13□□□□□ -0.15
Trim17-202ENSMUST00000075141 Baz1aO88379 1555 aa14.12□□□□□ -0.15
Trim17-202ENSMUST00000075141 ScribQ80U72 1612 aa14.11□□□□□ -0.15
Trim17-202ENSMUST00000075141 1700123L14RikQ3V2K7 440 aa14.09□□□□□ -0.15
Trim17-202ENSMUST00000075141 UbtfP25976 765 aaKnown RBP14.03□□□□□ -0.16
Trim17-202ENSMUST00000075141 Rsf1E9PWW9 1441 aaKnown RBP14.03□□□□□ -0.16
Trim17-202ENSMUST00000075141 Myt1Q8CFC2 1127 aa14.01□□□□□ -0.17
Trim17-202ENSMUST00000075141 Kdm5dQ62240 1548 aa14□□□□□ -0.17
Trim17-202ENSMUST00000075141 Gm38655A0A286YDK6 273 aa13.99□□□□□ -0.17
Trim17-202ENSMUST00000075141 Aebp2Q9Z248 504 aaKnown RBP13.99□□□□□ -0.17
Trim17-202ENSMUST00000075141 Anks4bQ8K3X6 423 aa13.97□□□□□ -0.17
Trim17-202ENSMUST00000075141 Ccdc88bQ4QRL3 1481 aa13.88□□□□□ -0.19
Trim17-202ENSMUST00000075141 Cdk11bP24788 784 aaKnown RBP13.88□□□□□ -0.19
Trim17-202ENSMUST00000075141 Nop58Q6DFW4 536 aaKnown RBP13.88□□□□□ -0.19
Trim17-202ENSMUST00000075141 Esf1Q3V1V3 845 aaKnown RBP13.86□□□□□ -0.19
Trim17-202ENSMUST00000075141 CenpbP27790 599 aa13.83□□□□□ -0.19
Trim17-202ENSMUST00000075141 DiexfQ8BTT6 772 aaKnown RBP13.83□□□□□ -0.2
Trim17-202ENSMUST00000075141 Myt1lP97500 1187 aa13.81□□□□□ -0.2
Trim17-202ENSMUST00000075141 Smarca2Q6DIC0 1577 aa13.81□□□□□ -0.2
Trim17-202ENSMUST00000075141 NacadQ5SWP3 1504 aa13.75□□□□□ -0.21
Trim17-202ENSMUST00000075141 ClspnQ80YR7 1315 aa13.74□□□□□ -0.21
Trim17-202ENSMUST00000075141 Aplp2Q06335 707 aa13.68□□□□□ -0.22
Trim17-202ENSMUST00000075141 Golga3P55937 1487 aa13.66□□□□□ -0.22
Trim17-202ENSMUST00000075141 TonslQ6NZL6 1363 aa13.65□□□□□ -0.22
Trim17-202ENSMUST00000075141 Brd4Q9ESU6 1400 aaKnown RBP13.64□□□□□ -0.23
Trim17-202ENSMUST00000075141 Cecr2E9Q2Z1 1453 aa13.64□□□□□ -0.23
Trim17-202ENSMUST00000075141 Plekhg3Q4VAC9 1341 aa13.61□□□□□ -0.23
Trim17-202ENSMUST00000075141 Mapk8ip2Q9ERE9 830 aa13.57□□□□□ -0.24
Trim17-202ENSMUST00000075141 Npm2Q80W85 207 aa13.56□□□□□ -0.24
Trim17-202ENSMUST00000075141 Crybg2B7ZCC2 1516 aa13.54□□□□□ -0.24
Trim17-202ENSMUST00000075141 SafbD3YXK2 937 aaKnown RBP13.54□□□□□ -0.24
Trim17-202ENSMUST00000075141 Bcl11aQ9QYE3 773 aa13.54□□□□□ -0.24
Trim17-202ENSMUST00000075141 Eid3Q3V124 375 aa13.54□□□□□ -0.24
Trim17-202ENSMUST00000075141 Ap3b1Q9Z1T1 1105 aa13.54□□□□□ -0.24
Trim17-202ENSMUST00000075141 Synj1Q8CHC4 1574 aa13.53□□□□□ -0.24
Trim17-202ENSMUST00000075141 Hnrnpul2Q00PI9 745 aaKnown RBP13.49□□□□□ -0.25
Trim17-202ENSMUST00000075141 Fam71e1A1L3C1 212 aa13.46□□□□□ -0.25
Trim17-202ENSMUST00000075141 Sycp2Q9CUU3 1500 aa13.44□□□□□ -0.26
Trim17-202ENSMUST00000075141 Clip1Q922J3 1391 aa13.39□□□□□ -0.27
Trim17-202ENSMUST00000075141 CftrP26361 1476 aa13.36□□□□□ -0.27
Trim17-202ENSMUST00000075141 Rapgef2Q8CHG7 1496 aa13.35□□□□□ -0.27
Trim17-202ENSMUST00000075141 Cep162Q6ZQ06 1403 aa13.35□□□□□ -0.27
Trim17-202ENSMUST00000075141 Cc2d2aQ8CFW7 1633 aa13.34□□□□□ -0.27
Trim17-202ENSMUST00000075141 Top2bQ64511 1612 aa13.27□□□□□ -0.28
Trim17-202ENSMUST00000075141 Slc24a1Q91WD8 1130 aa13.27□□□□□ -0.29
Trim17-202ENSMUST00000075141 Tnnt3Q9QZ47 272 aa13.26□□□□□ -0.29
Trim17-202ENSMUST00000075141 NclP09405 707 aaKnown RBP13.22□□□□□ -0.29
Trim17-202ENSMUST00000075141 Il27Q8K3I6 234 aa13.22□□□□□ -0.29
Trim17-202ENSMUST00000075141 Ncapd3Q6ZQK0 1506 aa13.2□□□□□ -0.3
Trim17-202ENSMUST00000075141 Fam50aQ9WV03 339 aaKnown RBP13.2□□□□□ -0.3
Trim17-202ENSMUST00000075141 PrkcshO08795 521 aa13.18□□□□□ -0.3
Trim17-202ENSMUST00000075141 Fmn1Q05860 1466 aa13.15□□□□□ -0.3
Trim17-202ENSMUST00000075141 Amer1Q7TS75 1132 aa13.15□□□□□ -0.3
Trim17-202ENSMUST00000075141 Ifnlr1Q8CGK5 535 aa13.15□□□□□ -0.3
Trim17-202ENSMUST00000075141 Top2aQ01320 1528 aaKnown RBP13.14□□□□□ -0.31
Trim17-202ENSMUST00000075141 Cttnbp2B9EJA2 1648 aa13.13□□□□□ -0.31
Trim17-202ENSMUST00000075141 BicraF8VPZ9 1578 aa13.13□□□□□ -0.31
Trim17-202ENSMUST00000075141 Anp32aO35381 247 aa13.12□□□□□ -0.31
Trim17-202ENSMUST00000075141 Lmod2Q3UHZ5 550 aa13.11□□□□□ -0.31
Trim17-202ENSMUST00000075141 Nolc1E9Q5C9 702 aaKnown RBP13.1□□□□□ -0.31
Trim17-202ENSMUST00000075141 Znf710Q3U288 666 aa13.09□□□□□ -0.31
Trim17-202ENSMUST00000075141 Eif5bQ05D44 1216 aaKnown RBP13.08□□□□□ -0.32
Trim17-202ENSMUST00000075141 Calr4Q3TQS0 420 aa13.07□□□□□ -0.32
Trim17-202ENSMUST00000075141 Ube2uB1AUC4 352 aa13.05□□□□□ -0.32
Trim17-202ENSMUST00000075141 Rpap1Q80TE0 1409 aa13.05□□□□□ -0.32
Trim17-202ENSMUST00000075141 Setd5Q5XJV7 1441 aa13.04□□□□□ -0.32
Trim17-202ENSMUST00000075141 Stra8P70278 393 aa13.04□□□□□ -0.32
Trim17-202ENSMUST00000075141 Hspa5P20029 655 aaKnown RBP13.03□□□□□ -0.32
Trim17-202ENSMUST00000075141 Eea1Q8BL66 1411 aa13.01□□□□□ -0.33
Trim17-202ENSMUST00000075141 Arap1Q4LDD4 1452 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 85.5 ms