RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Plb1Q3TTY0 1478 aa16.77■□□□□ 0.28
Trim23-203ENSMUST00000069187 Wdr66E9Q743 1299 aa16.76■□□□□ 0.27
Trim23-203ENSMUST00000069187 Urb2E9Q7L1 1524 aaKnown RBP16.76■□□□□ 0.27
Trim23-203ENSMUST00000069187 Map3k1P53349 1493 aa16.76■□□□□ 0.27
Trim23-203ENSMUST00000069187 Rad54l2Q99NG0 1466 aa16.74■□□□□ 0.27
Trim23-203ENSMUST00000069187 Setd5Q5XJV7 1441 aa16.73■□□□□ 0.27
Trim23-203ENSMUST00000069187 Carmil1Q6EDY6 1374 aa16.72■□□□□ 0.27
Trim23-203ENSMUST00000069187 Eea1Q8BL66 1411 aa16.72■□□□□ 0.27
Trim23-203ENSMUST00000069187 Aebp2Q9Z248 504 aaKnown RBP16.72■□□□□ 0.27
Trim23-203ENSMUST00000069187 Samd9lQ69Z37 1561 aa16.71■□□□□ 0.27
Trim23-203ENSMUST00000069187 UbtfP25976 765 aaKnown RBP16.71■□□□□ 0.27
Trim23-203ENSMUST00000069187 Eif4g1Q6NZJ6 1600 aaKnown RBP16.69■□□□□ 0.26
Trim23-203ENSMUST00000069187 Plekhg3Q4VAC9 1341 aa16.68■□□□□ 0.26
Trim23-203ENSMUST00000069187 SynmQ70IV5 1561 aa16.67■□□□□ 0.26
Trim23-203ENSMUST00000069187 Ift140E9PY46 1464 aa16.63■□□□□ 0.25
Trim23-203ENSMUST00000069187 AqrQ8CFQ3 1481 aaKnown RBP16.63■□□□□ 0.25
Trim23-203ENSMUST00000069187 Lrriq1Q0P5X1 1673 aa16.61■□□□□ 0.25
Trim23-203ENSMUST00000069187 Disp1Q3TDN0 1521 aa16.57■□□□□ 0.24
Trim23-203ENSMUST00000069187 Grin2aP35436 1464 aa16.57■□□□□ 0.24
Trim23-203ENSMUST00000069187 Fyco1Q8VDC1 1437 aa16.53■□□□□ 0.24
Trim23-203ENSMUST00000069187 Polr1aO35134 1717 aaKnown RBP16.53■□□□□ 0.24
Trim23-203ENSMUST00000069187 TonslQ6NZL6 1363 aa16.53■□□□□ 0.24
Trim23-203ENSMUST00000069187 Lmod2Q3UHZ5 550 aa16.52■□□□□ 0.24
Trim23-203ENSMUST00000069187 Rpap1Q80TE0 1409 aa16.52■□□□□ 0.23
Trim23-203ENSMUST00000069187 Pla2r1Q62028 1487 aa16.52■□□□□ 0.23
Trim23-203ENSMUST00000069187 EprsQ8CGC7 1512 aaKnown RBP16.51■□□□□ 0.23
Trim23-203ENSMUST00000069187 Magi3Q9EQJ9 1476 aa16.51■□□□□ 0.23
Trim23-203ENSMUST00000069187 Arap1Q4LDD4 1452 aa16.5■□□□□ 0.23
Trim23-203ENSMUST00000069187 DiexfQ8BTT6 772 aaKnown RBP16.5■□□□□ 0.23
Trim23-203ENSMUST00000069187 Arhgap27A2AB59 869 aa16.49■□□□□ 0.23
Trim23-203ENSMUST00000069187 Cux1P53564 1515 aa16.49■□□□□ 0.23
Trim23-203ENSMUST00000069187 Cc2d2bA0A286YDU8 1405 aa16.48■□□□□ 0.23
Trim23-203ENSMUST00000069187 BlmO88700 1416 aa16.48■□□□□ 0.23
Trim23-203ENSMUST00000069187 Tnnt3Q9QZ47 272 aa16.48■□□□□ 0.23
Trim23-203ENSMUST00000069187 Aebp1Q640N1 1128 aa16.47■□□□□ 0.23
Trim23-203ENSMUST00000069187 Ankrd26Q811D2 1581 aa16.47■□□□□ 0.23
Trim23-203ENSMUST00000069187 Nup160Q9Z0W3 1402 aaKnown RBP16.45■□□□□ 0.22
Trim23-203ENSMUST00000069187 CadpsQ80TJ1 1355 aa16.42■□□□□ 0.22
Trim23-203ENSMUST00000069187 Gm7298A0A0N4SVU1 1476 aa16.42■□□□□ 0.22
Trim23-203ENSMUST00000069187 Arhgef5E9Q7D5 1581 aa16.42■□□□□ 0.22
Trim23-203ENSMUST00000069187 Pbrm1Q8BSQ9 1634 aaKnown RBP16.41■□□□□ 0.22
Trim23-203ENSMUST00000069187 CntlnA2AM05 1397 aa16.41■□□□□ 0.22
Trim23-203ENSMUST00000069187 TchhA0A0B4J1F9 1599 aa16.38■□□□□ 0.21
Trim23-203ENSMUST00000069187 Pcf11G3X9Z4 1553 aa16.38■□□□□ 0.21
Trim23-203ENSMUST00000069187 Gm38655A0A286YDK6 273 aa16.36■□□□□ 0.21
Trim23-203ENSMUST00000069187 WizO88286 1684 aaKnown RBP16.36■□□□□ 0.21
Trim23-203ENSMUST00000069187 Erich3F6QRE9 1637 aa16.36■□□□□ 0.21
Trim23-203ENSMUST00000069187 Kif27Q7M6Z4 1394 aa16.36■□□□□ 0.21
Trim23-203ENSMUST00000069187 Eif4g3Q80XI3 1579 aaKnown RBP16.35■□□□□ 0.21
Trim23-203ENSMUST00000069187 Rusc2Q80U22 1514 aa16.35■□□□□ 0.21
Trim23-203ENSMUST00000069187 Naip1Q9QWK5 1403 aa16.34■□□□□ 0.21
Trim23-203ENSMUST00000069187 Bcl11aQ9QYE3 773 aa16.33■□□□□ 0.21
Trim23-203ENSMUST00000069187 WrnO09053 1401 aa16.33■□□□□ 0.2
Trim23-203ENSMUST00000069187 PxdnQ3UQ28 1475 aa16.33■□□□□ 0.2
Trim23-203ENSMUST00000069187 Tiam1Q60610 1591 aa16.33■□□□□ 0.2
Trim23-203ENSMUST00000069187 AknaQ80VW7 1404 aa16.33■□□□□ 0.2
Trim23-203ENSMUST00000069187 Soga1E1U8D0 1418 aa16.31■□□□□ 0.2
Trim23-203ENSMUST00000069187 Ncapd3Q6ZQK0 1506 aa16.31■□□□□ 0.2
Trim23-203ENSMUST00000069187 Adamts12Q811B3 1600 aa16.3■□□□□ 0.2
Trim23-203ENSMUST00000069187 Fam71e1A1L3C1 212 aa16.3■□□□□ 0.2
Trim23-203ENSMUST00000069187 Fkbp15Q6P9Q6 1216 aaKnown RBP16.29■□□□□ 0.2
Trim23-203ENSMUST00000069187 Ppargc1bQ8VHJ7 1014 aa16.29■□□□□ 0.2
Trim23-203ENSMUST00000069187 Fam50aQ9WV03 339 aaKnown RBP16.28■□□□□ 0.2
Trim23-203ENSMUST00000069187 Pelp1Q9DBD5 1123 aaKnown RBP16.27■□□□□ 0.19
Trim23-203ENSMUST00000069187 Lmo7E9PYF4 1699 aaKnown RBP16.26■□□□□ 0.19
Trim23-203ENSMUST00000069187 Fgd6Q69ZL1 1399 aa16.26■□□□□ 0.19
Trim23-203ENSMUST00000069187 Gpatch8A2A6A1 1505 aa16.26■□□□□ 0.19
Trim23-203ENSMUST00000069187 Abca5Q8K448 1642 aa16.25■□□□□ 0.19
Trim23-203ENSMUST00000069187 Setd1bQ8CFT2 1985 aa16.25■□□□□ 0.19
Trim23-203ENSMUST00000069187 Slx4Q6P1D7 1565 aa16.24■□□□□ 0.19
Trim23-203ENSMUST00000069187 Hnrnpul2Q00PI9 745 aaKnown RBP16.23■□□□□ 0.19
Trim23-203ENSMUST00000069187 Abca16E9PWJ7 1678 aa16.23■□□□□ 0.19
Trim23-203ENSMUST00000069187 Rtl5Q5DTT4 599 aa16.2■□□□□ 0.18
Trim23-203ENSMUST00000069187 Neo1P97798 1493 aa16.18■□□□□ 0.18
Trim23-203ENSMUST00000069187 Shroom2A2ALU4 1481 aa16.17■□□□□ 0.18
Trim23-203ENSMUST00000069187 Jph4Q80WT0 628 aa16.17■□□□□ 0.18
Trim23-203ENSMUST00000069187 Anp32aO35381 247 aa16.16■□□□□ 0.18
Trim23-203ENSMUST00000069187 Ube2uB1AUC4 352 aa16.16■□□□□ 0.18
Trim23-203ENSMUST00000069187 Stra8P70278 393 aa16.15■□□□□ 0.18
Trim23-203ENSMUST00000069187 Abcc2Q8VI47 1543 aa16.15■□□□□ 0.18
Trim23-203ENSMUST00000069187 Arhgap31A6X8Z5 1425 aa16.14■□□□□ 0.17
Trim23-203ENSMUST00000069187 Gm1043A0A140LJC2 1431 aa16.14■□□□□ 0.17
Trim23-203ENSMUST00000069187 SafbD3YXK2 937 aaKnown RBP16.14■□□□□ 0.17
Trim23-203ENSMUST00000069187 Peg3Q3URU2 1571 aa16.13■□□□□ 0.17
Trim23-203ENSMUST00000069187 Ccnb3Q810T2 1396 aa16.13■□□□□ 0.17
Trim23-203ENSMUST00000069187 Ifnlr1Q8CGK5 535 aa16.11■□□□□ 0.17
Trim23-203ENSMUST00000069187 Kdm5bQ80Y84 1544 aa16.11■□□□□ 0.17
Trim23-203ENSMUST00000069187 Ncoa2Q61026 1462 aa16.1■□□□□ 0.17
Trim23-203ENSMUST00000069187 Mapk8ip2Q9ERE9 830 aa16.09■□□□□ 0.17
Trim23-203ENSMUST00000069187 Gm14025A2AP89 1413 aa16.09■□□□□ 0.17
Trim23-203ENSMUST00000069187 Map3k4O08648 1597 aa16.08■□□□□ 0.16
Trim23-203ENSMUST00000069187 Ccdc141E9Q8Q6 1531 aa16.08■□□□□ 0.16
Trim23-203ENSMUST00000069187 Dhx57Q6P5D3 1388 aaKnown RBP16.07■□□□□ 0.16
Trim23-203ENSMUST00000069187 Pabpn1Q8CCS6 302 aaKnown RBP16.07■□□□□ 0.16
Trim23-203ENSMUST00000069187 Rapgef6Q5NCJ1 1609 aa16.06■□□□□ 0.16
Trim23-203ENSMUST00000069187 Chic2Q9D9G3 165 aa16.06■□□□□ 0.16
Trim23-203ENSMUST00000069187 Mug1P28665 1476 aa16.05■□□□□ 0.16
Trim23-203ENSMUST00000069187 NexmifQ5DTT1 1515 aa16.04■□□□□ 0.16
Trim23-203ENSMUST00000069187 Dnmt1P13864 1620 aaKnown RBP16.04■□□□□ 0.16
Trim23-203ENSMUST00000069187 BC005561E9Q5E2 1589 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms