RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 NischQ80TM9 1593 aa22.23■■□□□ 1.15
Trim23-203ENSMUST00000069187 Gm35339A0A140LHH9 1649 aa21.88■■□□□ 1.09
Trim23-203ENSMUST00000069187 Abcc9P70170 1546 aa21.47■■□□□ 1.03
Trim23-203ENSMUST00000069187 Abcc8B2RUS7 1588 aa21.19■□□□□ 0.98
Trim23-203ENSMUST00000069187 Rhox8Q6VSS7 320 aa20.44■□□□□ 0.86
Trim23-203ENSMUST00000069187 ScribQ80U72 1612 aa19.96■□□□□ 0.79
Trim23-203ENSMUST00000069187 Rtl1Q7M732 1744 aa19.72■□□□□ 0.75
Trim23-203ENSMUST00000069187 Dcaf1Q80TR8 1506 aa19.63■□□□□ 0.73
Trim23-203ENSMUST00000069187 Rpgrip1Q9EPQ2 1331 aa19.59■□□□□ 0.73
Trim23-203ENSMUST00000069187 Kdm5dQ62240 1548 aa19.59■□□□□ 0.73
Trim23-203ENSMUST00000069187 NacadQ5SWP3 1504 aa19.57■□□□□ 0.72
Trim23-203ENSMUST00000069187 Rb1cc1Q9ESK9 1588 aa19.44■□□□□ 0.7
Trim23-203ENSMUST00000069187 Ccdc180J3QNE4 1664 aa19.4■□□□□ 0.7
Trim23-203ENSMUST00000069187 Baz1aO88379 1555 aa19.17■□□□□ 0.66
Trim23-203ENSMUST00000069187 Sycp2Q9CUU3 1500 aa19.11■□□□□ 0.65
Trim23-203ENSMUST00000069187 Zcchc6Q5BLK4 1491 aaKnown RBP19.05■□□□□ 0.64
Trim23-203ENSMUST00000069187 Ccdc136Q3TVA9 1136 aa18.93■□□□□ 0.62
Trim23-203ENSMUST00000069187 Crybg2B7ZCC2 1516 aa18.88■□□□□ 0.61
Trim23-203ENSMUST00000069187 Acin1Q9JIX8 1338 aaKnown RBP18.83■□□□□ 0.6
Trim23-203ENSMUST00000069187 BicraF8VPZ9 1578 aa18.65■□□□□ 0.58
Trim23-203ENSMUST00000069187 Smarca2Q6DIC0 1577 aa18.62■□□□□ 0.57
Trim23-203ENSMUST00000069187 Trim41Q5NCC3 630 aa18.58■□□□□ 0.57
Trim23-203ENSMUST00000069187 Cecr2E9Q2Z1 1453 aa18.39■□□□□ 0.54
Trim23-203ENSMUST00000069187 Brd4Q9ESU6 1400 aaKnown RBP18.36■□□□□ 0.53
Trim23-203ENSMUST00000069187 Pcgf6Q99NA9 353 aa18.33■□□□□ 0.53
Trim23-203ENSMUST00000069187 HrcG5E8J6 738 aa18.32■□□□□ 0.52
Trim23-203ENSMUST00000069187 Esf1Q3V1V3 845 aaKnown RBP18.31■□□□□ 0.52
Trim23-203ENSMUST00000069187 Cngb1E1AZ71 1325 aa18.23■□□□□ 0.51
Trim23-203ENSMUST00000069187 Pds5bQ4VA53 1446 aaKnown RBP18.21■□□□□ 0.51
Trim23-203ENSMUST00000069187 Smarca4Q3TKT4 1613 aaKnown RBP18.2■□□□□ 0.5
Trim23-203ENSMUST00000069187 Atad2bE9Q166 1460 aaKnown RBP18.12■□□□□ 0.49
Trim23-203ENSMUST00000069187 Synj1Q8CHC4 1574 aa18.11■□□□□ 0.49
Trim23-203ENSMUST00000069187 CftrP26361 1476 aa18.1■□□□□ 0.49
Trim23-203ENSMUST00000069187 Ehmt2Q9Z148 1263 aaKnown RBP18.04■□□□□ 0.48
Trim23-203ENSMUST00000069187 Iqgap2Q3UQ44 1575 aa18.02■□□□□ 0.48
Trim23-203ENSMUST00000069187 Cttnbp2B9EJA2 1648 aa18■□□□□ 0.47
Trim23-203ENSMUST00000069187 Ercc6F8VPZ5 1481 aa17.93■□□□□ 0.46
Trim23-203ENSMUST00000069187 Golga3P55937 1487 aa17.92■□□□□ 0.46
Trim23-203ENSMUST00000069187 Supt5hO55201 1082 aaKnown RBP17.77■□□□□ 0.44
Trim23-203ENSMUST00000069187 Frmpd1A2AKB4 1549 aa17.73■□□□□ 0.43
Trim23-203ENSMUST00000069187 Wdr62Q3U3T8 1523 aa17.71■□□□□ 0.43
Trim23-203ENSMUST00000069187 Chic1Q8CBW7 227 aa17.71■□□□□ 0.43
Trim23-203ENSMUST00000069187 Las1lA2BE28 776 aaKnown RBP17.68■□□□□ 0.42
Trim23-203ENSMUST00000069187 Gab3Q8BSM5 595 aa17.68■□□□□ 0.42
Trim23-203ENSMUST00000069187 Cep164Q5DU05 1446 aa17.67■□□□□ 0.42
Trim23-203ENSMUST00000069187 Rsf1E9PWW9 1441 aaKnown RBP17.65■□□□□ 0.42
Trim23-203ENSMUST00000069187 Neurod1Q60867 357 aa17.63■□□□□ 0.41
Trim23-203ENSMUST00000069187 Ccdc88bQ4QRL3 1481 aa17.62■□□□□ 0.41
Trim23-203ENSMUST00000069187 Ubl4bQ9CQ84 188 aa17.6■□□□□ 0.41
Trim23-203ENSMUST00000069187 Top2bQ64511 1612 aa17.6■□□□□ 0.41
Trim23-203ENSMUST00000069187 Phldb1Q6PDH0 1371 aaKnown RBP17.59■□□□□ 0.41
Trim23-203ENSMUST00000069187 Thoc2B1AZI6 1594 aaKnown RBP17.58■□□□□ 0.41
Trim23-203ENSMUST00000069187 Fmn1Q05860 1466 aa17.56■□□□□ 0.4
Trim23-203ENSMUST00000069187 Kif15Q6P9L6 1387 aa17.55■□□□□ 0.4
Trim23-203ENSMUST00000069187 Il27Q8K3I6 234 aa17.55■□□□□ 0.4
Trim23-203ENSMUST00000069187 Cc2d2aQ8CFW7 1633 aa17.52■□□□□ 0.39
Trim23-203ENSMUST00000069187 NefmP08553 848 aa17.43■□□□□ 0.38
Trim23-203ENSMUST00000069187 Npm2Q80W85 207 aa17.42■□□□□ 0.38
Trim23-203ENSMUST00000069187 Dnajc5bQ9CQ94 199 aa17.41■□□□□ 0.38
Trim23-203ENSMUST00000069187 Npm1Q61937 292 aaKnown RBP17.41■□□□□ 0.38
Trim23-203ENSMUST00000069187 Fam135aQ6NS59 1506 aa17.37■□□□□ 0.37
Trim23-203ENSMUST00000069187 Lamc3Q9R0B6 1581 aa17.33■□□□□ 0.36
Trim23-203ENSMUST00000069187 Cux2P70298 1426 aa17.33■□□□□ 0.36
Trim23-203ENSMUST00000069187 Ccdc18Q640L5 1455 aa17.32■□□□□ 0.36
Trim23-203ENSMUST00000069187 Unc13aQ4KUS2 1712 aa17.32■□□□□ 0.36
Trim23-203ENSMUST00000069187 Myt1Q8CFC2 1127 aa17.3■□□□□ 0.36
Trim23-203ENSMUST00000069187 Anks4bQ8K3X6 423 aa17.29■□□□□ 0.36
Trim23-203ENSMUST00000069187 Top2aQ01320 1528 aaKnown RBP17.27■□□□□ 0.35
Trim23-203ENSMUST00000069187 TnnQ80Z71 1560 aa17.26■□□□□ 0.35
Trim23-203ENSMUST00000069187 Myt1lP97500 1187 aa17.26■□□□□ 0.35
Trim23-203ENSMUST00000069187 Zeb1Q64318 1117 aa17.26■□□□□ 0.35
Trim23-203ENSMUST00000069187 1700123L14RikQ3V2K7 440 aa17.18■□□□□ 0.34
Trim23-203ENSMUST00000069187 Sall2Q9QX96 1004 aa17.16■□□□□ 0.34
Trim23-203ENSMUST00000069187 Camsap1A2AHC3 1581 aa17.16■□□□□ 0.34
Trim23-203ENSMUST00000069187 Mrc2Q64449 1479 aa17.14■□□□□ 0.33
Trim23-203ENSMUST00000069187 Baz1bQ9Z277 1479 aa17.13■□□□□ 0.33
Trim23-203ENSMUST00000069187 Mier1Q5UAK0 511 aa17.09■□□□□ 0.33
Trim23-203ENSMUST00000069187 CenpbP27790 599 aa17.08■□□□□ 0.33
Trim23-203ENSMUST00000069187 LrpprcQ6PB66 1392 aaKnown RBP17.08■□□□□ 0.32
Trim23-203ENSMUST00000069187 Rapgef2Q8CHG7 1496 aa17.07■□□□□ 0.32
Trim23-203ENSMUST00000069187 Aplp2Q06335 707 aa17.04■□□□□ 0.32
Trim23-203ENSMUST00000069187 Cep162Q6ZQ06 1403 aa17.03■□□□□ 0.32
Trim23-203ENSMUST00000069187 Grin2bQ01097 1482 aa17.03■□□□□ 0.32
Trim23-203ENSMUST00000069187 Csrnp3P59055 597 aa17.02■□□□□ 0.32
Trim23-203ENSMUST00000069187 Dhx29Q6PGC1 1365 aaKnown RBP17.01■□□□□ 0.31
Trim23-203ENSMUST00000069187 NrkQ9R0G8 1455 aa16.99■□□□□ 0.31
Trim23-203ENSMUST00000069187 Shroom4Q1W617 1475 aa16.98■□□□□ 0.31
Trim23-203ENSMUST00000069187 PtprkP35822 1457 aa16.97■□□□□ 0.31
Trim23-203ENSMUST00000069187 PogzQ8BZH4 1409 aaKnown RBP16.96■□□□□ 0.31
Trim23-203ENSMUST00000069187 Duox2A2AQ99 1517 aa16.92■□□□□ 0.3
Trim23-203ENSMUST00000069187 Efcab5A0JP43 1406 aa16.92■□□□□ 0.3
Trim23-203ENSMUST00000069187 Cdk11bP24788 784 aaKnown RBP16.9■□□□□ 0.3
Trim23-203ENSMUST00000069187 Kif21aQ9QXL2 1672 aa16.86■□□□□ 0.29
Trim23-203ENSMUST00000069187 ClspnQ80YR7 1315 aa16.85■□□□□ 0.29
Trim23-203ENSMUST00000069187 Arhgap35Q91YM2 1499 aa16.84■□□□□ 0.29
Trim23-203ENSMUST00000069187 Clip1Q922J3 1391 aa16.83■□□□□ 0.29
Trim23-203ENSMUST00000069187 Crocc2F6XLV1 1638 aa16.83■□□□□ 0.28
Trim23-203ENSMUST00000069187 Nop58Q6DFW4 536 aaKnown RBP16.82■□□□□ 0.28
Trim23-203ENSMUST00000069187 Ap3b1Q9Z1T1 1105 aa16.8■□□□□ 0.28
Trim23-203ENSMUST00000069187 Mroh2bQ7M6Y6 1581 aa16.77■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms