RNA–Protein interactions for RNA: ENSMUST00000063838.10

Fam49b-201, Transcript of Protein FAM49B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Fam49b, Length 3,797 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fam49b-201ENSMUST00000063838 Ppp4r2Q0VGB7 417 aa18.15■□□□□ 0.5
Fam49b-201ENSMUST00000063838 PtprkP35822 1457 aa18.13■□□□□ 0.49
Fam49b-201ENSMUST00000063838 Wwc2Q6NXJ0 1187 aa18.1■□□□□ 0.49
Fam49b-201ENSMUST00000063838 Smarca4Q3TKT4 1613 aaKnown RBP18.1■□□□□ 0.49
Fam49b-201ENSMUST00000063838 Cttnbp2B9EJA2 1648 aa18.09■□□□□ 0.49
Fam49b-201ENSMUST00000063838 Anp32aO35381 247 aa18.06■□□□□ 0.48
Fam49b-201ENSMUST00000063838 Rgl3Q3UYI5 709 aa18.06■□□□□ 0.48
Fam49b-201ENSMUST00000063838 Slc4a3P16283 1227 aa18.06■□□□□ 0.48
Fam49b-201ENSMUST00000063838 Grwd1Q810D6 446 aaKnown RBP18.02■□□□□ 0.48
Fam49b-201ENSMUST00000063838 Aebp1Q640N1 1128 aa18.02■□□□□ 0.47
Fam49b-201ENSMUST00000063838 Baz1bQ9Z277 1479 aa18■□□□□ 0.47
Fam49b-201ENSMUST00000063838 Top2aQ01320 1528 aaKnown RBP18■□□□□ 0.47
Fam49b-201ENSMUST00000063838 Arap1Q4LDD4 1452 aa17.98■□□□□ 0.47
Fam49b-201ENSMUST00000063838 Rad21Q61550 635 aaKnown RBP17.98■□□□□ 0.47
Fam49b-201ENSMUST00000063838 Pelp1Q9DBD5 1123 aaKnown RBP17.96■□□□□ 0.47
Fam49b-201ENSMUST00000063838 Arhgap35Q91YM2 1499 aa17.96■□□□□ 0.46
Fam49b-201ENSMUST00000063838 Top2bQ64511 1612 aa17.95■□□□□ 0.46
Fam49b-201ENSMUST00000063838 Iqgap2Q3UQ44 1575 aa17.95■□□□□ 0.46
Fam49b-201ENSMUST00000063838 Ncapd3Q6ZQK0 1506 aa17.94■□□□□ 0.46
Fam49b-201ENSMUST00000063838 Erich6D3Z6S9 713 aa17.93■□□□□ 0.46
Fam49b-201ENSMUST00000063838 Os9Q8K2C7 672 aa17.92■□□□□ 0.46
Fam49b-201ENSMUST00000063838 Ccdc18Q640L5 1455 aa17.92■□□□□ 0.46
Fam49b-201ENSMUST00000063838 Nolc1E9Q5C9 702 aaKnown RBP17.92■□□□□ 0.46
Fam49b-201ENSMUST00000063838 Cabp1Q9JLK7 227 aa17.92■□□□□ 0.46
Fam49b-201ENSMUST00000063838 Ccer2J3QPU5 274 aa17.87■□□□□ 0.45
Fam49b-201ENSMUST00000063838 Arhgap27A2AB59 869 aa17.87■□□□□ 0.45
Fam49b-201ENSMUST00000063838 Cux2P70298 1426 aa17.87■□□□□ 0.45
Fam49b-201ENSMUST00000063838 Atad2bE9Q166 1460 aaKnown RBP17.87■□□□□ 0.45
Fam49b-201ENSMUST00000063838 Zfp644E9QA22 1323 aa17.86■□□□□ 0.45
Fam49b-201ENSMUST00000063838 AqrQ8CFQ3 1481 aaKnown RBP17.86■□□□□ 0.45
Fam49b-201ENSMUST00000063838 Pds5bQ4VA53 1446 aaKnown RBP17.85■□□□□ 0.45
Fam49b-201ENSMUST00000063838 Wdr43Q6ZQL4 677 aaKnown RBP17.85■□□□□ 0.45
Fam49b-201ENSMUST00000063838 Gm13697A2AK42 830 aa17.83■□□□□ 0.45
Fam49b-201ENSMUST00000063838 Exoc6Q8R313 802 aa17.83■□□□□ 0.45
Fam49b-201ENSMUST00000063838 Ercc6F8VPZ5 1481 aa17.82■□□□□ 0.44
Fam49b-201ENSMUST00000063838 Pkd2O35245 966 aa17.82■□□□□ 0.44
Fam49b-201ENSMUST00000063838 Znf710Q3U288 666 aa17.81■□□□□ 0.44
Fam49b-201ENSMUST00000063838 Mphosph9A6H5Y1 991 aa17.81■□□□□ 0.44
Fam49b-201ENSMUST00000063838 ArxO35085 564 aa17.8■□□□□ 0.44
Fam49b-201ENSMUST00000063838 Naip1Q9QWK5 1403 aa17.79■□□□□ 0.44
Fam49b-201ENSMUST00000063838 Rangap1P46061 589 aaKnown RBP17.77■□□□□ 0.44
Fam49b-201ENSMUST00000063838 Myt1Q8CFC2 1127 aa17.75■□□□□ 0.43
Fam49b-201ENSMUST00000063838 Ofd1Q80Z25 1017 aa17.75■□□□□ 0.43
Fam49b-201ENSMUST00000063838 Ecm2Q5FW85 670 aa17.74■□□□□ 0.43
Fam49b-201ENSMUST00000063838 Ccnb3Q810T2 1396 aa17.73■□□□□ 0.43
Fam49b-201ENSMUST00000063838 Amer1Q7TS75 1132 aa17.73■□□□□ 0.43
Fam49b-201ENSMUST00000063838 Rpap1Q80TE0 1409 aa17.72■□□□□ 0.43
Fam49b-201ENSMUST00000063838 DiexfQ8BTT6 772 aaKnown RBP17.72■□□□□ 0.43
Fam49b-201ENSMUST00000063838 Trak1Q6PD31 939 aa17.7■□□□□ 0.42
Fam49b-201ENSMUST00000063838 NeflP08551 543 aa17.7■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Kif27Q7M6Z4 1394 aa17.7■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Apbb1Q9QXJ1 710 aa17.7■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Rad54l2Q99NG0 1466 aa17.69■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Anp32bQ9EST5 272 aaKnown RBP17.68■□□□□ 0.42
Fam49b-201ENSMUST00000063838 CntlnA2AM05 1397 aa17.68■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Frmpd1A2AKB4 1549 aa17.67■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Shroom4Q1W617 1475 aa17.67■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Supt16hQ920B9 1047 aa17.67■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Fyco1Q8VDC1 1437 aa17.66■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Rundc1Q0VDN7 615 aa17.66■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Card11Q8CIS0 1159 aa17.66■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Mia2Q91ZV0 1396 aa17.66■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Arhgef5E9Q7D5 1581 aa17.66■□□□□ 0.42
Fam49b-201ENSMUST00000063838 4933416C03RikQ3V063 378 aa17.65■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Kdm2aP59997 1161 aa17.65■□□□□ 0.42
Fam49b-201ENSMUST00000063838 LrpprcQ6PB66 1392 aaKnown RBP17.64■□□□□ 0.42
Fam49b-201ENSMUST00000063838 Polr3glQ8R0C0 218 aa17.64■□□□□ 0.41
Fam49b-201ENSMUST00000063838 Carmil1Q6EDY6 1374 aa17.63■□□□□ 0.41
Fam49b-201ENSMUST00000063838 Kcnh8P59111 1102 aa17.61■□□□□ 0.41
Fam49b-201ENSMUST00000063838 Rrp7aQ9D1C9 280 aaKnown RBP17.6■□□□□ 0.41
Fam49b-201ENSMUST00000063838 Dbr1Q923B1 550 aa17.59■□□□□ 0.41
Fam49b-201ENSMUST00000063838 Smg6P61406 1418 aaKnown RBP17.58■□□□□ 0.41
Fam49b-201ENSMUST00000063838 Dhx29Q6PGC1 1365 aaKnown RBP17.57■□□□□ 0.4
Fam49b-201ENSMUST00000063838 DaxxO35613 739 aa17.57■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Slc4a2P13808 1237 aaKnown RBP17.57■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Usp47Q8BY87 1376 aa17.55■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Mtus2Q3UHD3 1353 aa17.55■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Pak3Q61036 559 aa17.55■□□□□ 0.4
Fam49b-201ENSMUST00000063838 B4galnt3Q6L8S8 986 aa17.54■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Mroh2bQ7M6Y6 1581 aa17.53■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Trim26Q99PN3 545 aa17.53■□□□□ 0.4
Fam49b-201ENSMUST00000063838 3425401B19RikD3Z1D3 1412 aa17.53■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Neurod2Q62414 383 aa17.52■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Bcl11aQ9QYE3 773 aa17.52■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Phldb1Q6PDH0 1371 aaKnown RBP17.52■□□□□ 0.4
Fam49b-201ENSMUST00000063838 Grin2bQ01097 1482 aa17.52■□□□□ 0.39
Fam49b-201ENSMUST00000063838 NrkQ9R0G8 1455 aa17.51■□□□□ 0.39
Fam49b-201ENSMUST00000063838 Tiam1Q60610 1591 aa17.5■□□□□ 0.39
Fam49b-201ENSMUST00000063838 Map4P27546 1125 aaKnown RBP17.49■□□□□ 0.39
Fam49b-201ENSMUST00000063838 Nlrp6Q91WS2 869 aa17.49■□□□□ 0.39
Fam49b-201ENSMUST00000063838 Cux1P53564 1515 aa17.48■□□□□ 0.39
Fam49b-201ENSMUST00000063838 Cnga1P29974 684 aa17.47■□□□□ 0.39
Fam49b-201ENSMUST00000063838 Duox2A2AQ99 1517 aa17.46■□□□□ 0.39
Fam49b-201ENSMUST00000063838 Slx4Q6P1D7 1565 aa17.45■□□□□ 0.38
Fam49b-201ENSMUST00000063838 Atp1b4Q99ME6 356 aa17.45■□□□□ 0.38
Fam49b-201ENSMUST00000063838 WrnO09053 1401 aa17.44■□□□□ 0.38
Fam49b-201ENSMUST00000063838 Pcf11G3X9Z4 1553 aa17.44■□□□□ 0.38
Fam49b-201ENSMUST00000063838 Ifit1bl1D3Z6F0 470 aa17.42■□□□□ 0.38
Fam49b-201ENSMUST00000063838 Camsap1A2AHC3 1581 aa17.41■□□□□ 0.38
Fam49b-201ENSMUST00000063838 Fhad1A6PWD2 1420 aa17.41■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms