RNA–Protein interactions for RNA: ENSMUST00000063838.10

Fam49b-201, Transcript of Protein FAM49B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Fam49b, Length 3,797 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fam49b-201ENSMUST00000063838 Rhox8Q6VSS7 320 aa23.75■■□□□ 1.39
Fam49b-201ENSMUST00000063838 NischQ80TM9 1593 aa22.76■■□□□ 1.23
Fam49b-201ENSMUST00000063838 Ehmt2Q9Z148 1263 aaKnown RBP22.38■■□□□ 1.17
Fam49b-201ENSMUST00000063838 Ccdc136Q3TVA9 1136 aa21.88■■□□□ 1.09
Fam49b-201ENSMUST00000063838 Abcc9P70170 1546 aa21.6■■□□□ 1.05
Fam49b-201ENSMUST00000063838 Abcc8B2RUS7 1588 aa21.2■□□□□ 0.98
Fam49b-201ENSMUST00000063838 Gab3Q8BSM5 595 aa21.08■□□□□ 0.96
Fam49b-201ENSMUST00000063838 Trim41Q5NCC3 630 aa21.05■□□□□ 0.96
Fam49b-201ENSMUST00000063838 Rpgrip1Q9EPQ2 1331 aa21.03■□□□□ 0.96
Fam49b-201ENSMUST00000063838 Cngb1E1AZ71 1325 aa20.92■□□□□ 0.94
Fam49b-201ENSMUST00000063838 Acin1Q9JIX8 1338 aaKnown RBP20.87■□□□□ 0.93
Fam49b-201ENSMUST00000063838 Ccdc180J3QNE4 1664 aa20.76■□□□□ 0.91
Fam49b-201ENSMUST00000063838 Zeb1Q64318 1117 aa20.75■□□□□ 0.91
Fam49b-201ENSMUST00000063838 Gm35339A0A140LHH9 1649 aa20.75■□□□□ 0.91
Fam49b-201ENSMUST00000063838 Pcgf6Q99NA9 353 aa20.55■□□□□ 0.88
Fam49b-201ENSMUST00000063838 Esf1Q3V1V3 845 aaKnown RBP20.53■□□□□ 0.88
Fam49b-201ENSMUST00000063838 HrcG5E8J6 738 aa20.48■□□□□ 0.87
Fam49b-201ENSMUST00000063838 Rtl1Q7M732 1744 aa20.47■□□□□ 0.87
Fam49b-201ENSMUST00000063838 Zcchc6Q5BLK4 1491 aaKnown RBP20.36■□□□□ 0.85
Fam49b-201ENSMUST00000063838 Supt5hO55201 1082 aaKnown RBP20.36■□□□□ 0.85
Fam49b-201ENSMUST00000063838 Ppargc1bQ8VHJ7 1014 aa20.33■□□□□ 0.84
Fam49b-201ENSMUST00000063838 Myt1lP97500 1187 aa20.3■□□□□ 0.84
Fam49b-201ENSMUST00000063838 Wdr66E9Q743 1299 aa20.25■□□□□ 0.83
Fam49b-201ENSMUST00000063838 UbtfP25976 765 aaKnown RBP20.21■□□□□ 0.83
Fam49b-201ENSMUST00000063838 Chic1Q8CBW7 227 aa20.15■□□□□ 0.82
Fam49b-201ENSMUST00000063838 Dcaf1Q80TR8 1506 aa20.01■□□□□ 0.79
Fam49b-201ENSMUST00000063838 Rb1cc1Q9ESK9 1588 aa19.96■□□□□ 0.79
Fam49b-201ENSMUST00000063838 Npm2Q80W85 207 aa19.95■□□□□ 0.78
Fam49b-201ENSMUST00000063838 Mier1Q5UAK0 511 aa19.94■□□□□ 0.78
Fam49b-201ENSMUST00000063838 Las1lA2BE28 776 aaKnown RBP19.8■□□□□ 0.76
Fam49b-201ENSMUST00000063838 Neurod1Q60867 357 aa19.77■□□□□ 0.75
Fam49b-201ENSMUST00000063838 Il27Q8K3I6 234 aa19.73■□□□□ 0.75
Fam49b-201ENSMUST00000063838 Ap3b1Q9Z1T1 1105 aa19.7■□□□□ 0.74
Fam49b-201ENSMUST00000063838 Sall2Q9QX96 1004 aa19.69■□□□□ 0.74
Fam49b-201ENSMUST00000063838 NefmP08553 848 aa19.68■□□□□ 0.74
Fam49b-201ENSMUST00000063838 Plekhg3Q4VAC9 1341 aa19.57■□□□□ 0.72
Fam49b-201ENSMUST00000063838 Cep164Q5DU05 1446 aa19.57■□□□□ 0.72
Fam49b-201ENSMUST00000063838 Kdm5dQ62240 1548 aa19.54■□□□□ 0.72
Fam49b-201ENSMUST00000063838 Gm38655A0A286YDK6 273 aa19.53■□□□□ 0.72
Fam49b-201ENSMUST00000063838 Rsf1E9PWW9 1441 aaKnown RBP19.5■□□□□ 0.71
Fam49b-201ENSMUST00000063838 Baz1aO88379 1555 aa19.49■□□□□ 0.71
Fam49b-201ENSMUST00000063838 Mapk8ip2Q9ERE9 830 aa19.46■□□□□ 0.71
Fam49b-201ENSMUST00000063838 ScribQ80U72 1612 aa19.45■□□□□ 0.7
Fam49b-201ENSMUST00000063838 Eid3Q3V124 375 aa19.42■□□□□ 0.7
Fam49b-201ENSMUST00000063838 Ube2uB1AUC4 352 aa19.41■□□□□ 0.7
Fam49b-201ENSMUST00000063838 Aebp2Q9Z248 504 aaKnown RBP19.41■□□□□ 0.7
Fam49b-201ENSMUST00000063838 Ccdc88bQ4QRL3 1481 aa19.34■□□□□ 0.69
Fam49b-201ENSMUST00000063838 Nop58Q6DFW4 536 aaKnown RBP19.33■□□□□ 0.69
Fam49b-201ENSMUST00000063838 Csrnp3P59055 597 aa19.33■□□□□ 0.68
Fam49b-201ENSMUST00000063838 Cdk11bP24788 784 aaKnown RBP19.32■□□□□ 0.68
Fam49b-201ENSMUST00000063838 NacadQ5SWP3 1504 aa19.31■□□□□ 0.68
Fam49b-201ENSMUST00000063838 Slc24a1Q91WD8 1130 aa19.28■□□□□ 0.68
Fam49b-201ENSMUST00000063838 Fam50aQ9WV03 339 aaKnown RBP19.24■□□□□ 0.67
Fam49b-201ENSMUST00000063838 Brd4Q9ESU6 1400 aaKnown RBP19.22■□□□□ 0.67
Fam49b-201ENSMUST00000063838 TonslQ6NZL6 1363 aa19.19■□□□□ 0.66
Fam49b-201ENSMUST00000063838 Lmod2Q3UHZ5 550 aa19.19■□□□□ 0.66
Fam49b-201ENSMUST00000063838 Cecr2E9Q2Z1 1453 aa19.15■□□□□ 0.66
Fam49b-201ENSMUST00000063838 Golga3P55937 1487 aa19.06■□□□□ 0.64
Fam49b-201ENSMUST00000063838 Clip1Q922J3 1391 aa19■□□□□ 0.63
Fam49b-201ENSMUST00000063838 ClspnQ80YR7 1315 aa18.99■□□□□ 0.63
Fam49b-201ENSMUST00000063838 NclP09405 707 aaKnown RBP18.98■□□□□ 0.63
Fam49b-201ENSMUST00000063838 1700123L14RikQ3V2K7 440 aa18.97■□□□□ 0.63
Fam49b-201ENSMUST00000063838 Anks4bQ8K3X6 423 aa18.9■□□□□ 0.62
Fam49b-201ENSMUST00000063838 CenpbP27790 599 aa18.88■□□□□ 0.61
Fam49b-201ENSMUST00000063838 Smarca2Q6DIC0 1577 aa18.88■□□□□ 0.61
Fam49b-201ENSMUST00000063838 Sycp2Q9CUU3 1500 aa18.79■□□□□ 0.6
Fam49b-201ENSMUST00000063838 Eif5bQ05D44 1216 aaKnown RBP18.77■□□□□ 0.6
Fam49b-201ENSMUST00000063838 Synj1Q8CHC4 1574 aa18.75■□□□□ 0.59
Fam49b-201ENSMUST00000063838 SafbD3YXK2 937 aaKnown RBP18.69■□□□□ 0.58
Fam49b-201ENSMUST00000063838 CftrP26361 1476 aa18.66■□□□□ 0.58
Fam49b-201ENSMUST00000063838 Chic2Q9D9G3 165 aa18.65■□□□□ 0.58
Fam49b-201ENSMUST00000063838 Zbtb7cQ8VCZ7 619 aa18.63■□□□□ 0.57
Fam49b-201ENSMUST00000063838 Npm1Q61937 292 aaKnown RBP18.6■□□□□ 0.57
Fam49b-201ENSMUST00000063838 Zbtb4Q5F293 982 aa18.6■□□□□ 0.57
Fam49b-201ENSMUST00000063838 Cep162Q6ZQ06 1403 aa18.59■□□□□ 0.57
Fam49b-201ENSMUST00000063838 Rapgef2Q8CHG7 1496 aa18.59■□□□□ 0.57
Fam49b-201ENSMUST00000063838 BlmO88700 1416 aa18.58■□□□□ 0.56
Fam49b-201ENSMUST00000063838 Setd5Q5XJV7 1441 aa18.57■□□□□ 0.56
Fam49b-201ENSMUST00000063838 Hnrnpul2Q00PI9 745 aaKnown RBP18.57■□□□□ 0.56
Fam49b-201ENSMUST00000063838 Crybg2B7ZCC2 1516 aa18.51■□□□□ 0.55
Fam49b-201ENSMUST00000063838 Kif15Q6P9L6 1387 aa18.46■□□□□ 0.55
Fam49b-201ENSMUST00000063838 Hspa5P20029 655 aaKnown RBP18.44■□□□□ 0.54
Fam49b-201ENSMUST00000063838 Ubl4bQ9CQ84 188 aa18.43■□□□□ 0.54
Fam49b-201ENSMUST00000063838 Ttbk1Q6PCN3 1308 aa18.42■□□□□ 0.54
Fam49b-201ENSMUST00000063838 Aplp2Q06335 707 aa18.4■□□□□ 0.54
Fam49b-201ENSMUST00000063838 Sin3aQ60520 1274 aaKnown RBP18.4■□□□□ 0.54
Fam49b-201ENSMUST00000063838 P3h3Q8CG70 732 aa18.37■□□□□ 0.53
Fam49b-201ENSMUST00000063838 Fkbp15Q6P9Q6 1216 aaKnown RBP18.37■□□□□ 0.53
Fam49b-201ENSMUST00000063838 Fam71e1A1L3C1 212 aa18.36■□□□□ 0.53
Fam49b-201ENSMUST00000063838 Eea1Q8BL66 1411 aa18.32■□□□□ 0.52
Fam49b-201ENSMUST00000063838 Cc2d2aQ8CFW7 1633 aa18.32■□□□□ 0.52
Fam49b-201ENSMUST00000063838 Stra8P70278 393 aa18.32■□□□□ 0.52
Fam49b-201ENSMUST00000063838 Tnnt3Q9QZ47 272 aa18.31■□□□□ 0.52
Fam49b-201ENSMUST00000063838 Fmn1Q05860 1466 aa18.31■□□□□ 0.52
Fam49b-201ENSMUST00000063838 NrdcQ8BHG1 1161 aa18.28■□□□□ 0.52
Fam49b-201ENSMUST00000063838 BicraF8VPZ9 1578 aa18.21■□□□□ 0.51
Fam49b-201ENSMUST00000063838 Mrs2Q5NCE8 434 aa18.19■□□□□ 0.5
Fam49b-201ENSMUST00000063838 Ifnlr1Q8CGK5 535 aa18.19■□□□□ 0.5
Fam49b-201ENSMUST00000063838 Prdm10Q3UTQ7 1184 aa18.17■□□□□ 0.5
Fam49b-201ENSMUST00000063838 Calr4Q3TQS0 420 aa18.17■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms