RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Cc2d2bA0A286YDU8 1405 aa18.84■□□□□ 0.61
Upk3b-201ENSMUST00000062606 Mroh2bQ7M6Y6 1581 aa18.83■□□□□ 0.6
Upk3b-201ENSMUST00000062606 Shroom2A2ALU4 1481 aa18.8■□□□□ 0.6
Upk3b-201ENSMUST00000062606 Grin2aP35436 1464 aa18.78■□□□□ 0.6
Upk3b-201ENSMUST00000062606 EprsQ8CGC7 1512 aaKnown RBP18.78■□□□□ 0.6
Upk3b-201ENSMUST00000062606 Pla2r1Q62028 1487 aa18.76■□□□□ 0.59
Upk3b-201ENSMUST00000062606 Adamts12Q811B3 1600 aa18.74■□□□□ 0.59
Upk3b-201ENSMUST00000062606 Arhgap35Q91YM2 1499 aa18.71■□□□□ 0.59
Upk3b-201ENSMUST00000062606 Polr1aO35134 1717 aaKnown RBP18.7■□□□□ 0.58
Upk3b-201ENSMUST00000062606 Il27Q8K3I6 234 aa18.65■□□□□ 0.58
Upk3b-201ENSMUST00000062606 Ehmt2Q9Z148 1263 aaKnown RBP18.65■□□□□ 0.58
Upk3b-201ENSMUST00000062606 Cep162Q6ZQ06 1403 aa18.63■□□□□ 0.57
Upk3b-201ENSMUST00000062606 Abca16E9PWJ7 1678 aa18.63■□□□□ 0.57
Upk3b-201ENSMUST00000062606 Rad54l2Q99NG0 1466 aa18.62■□□□□ 0.57
Upk3b-201ENSMUST00000062606 Carmil1Q6EDY6 1374 aa18.61■□□□□ 0.57
Upk3b-201ENSMUST00000062606 Abca5Q8K448 1642 aa18.61■□□□□ 0.57
Upk3b-201ENSMUST00000062606 Rpap1Q80TE0 1409 aa18.61■□□□□ 0.57
Upk3b-201ENSMUST00000062606 Map3k4O08648 1597 aa18.59■□□□□ 0.57
Upk3b-201ENSMUST00000062606 TchhA0A0B4J1F9 1599 aa18.59■□□□□ 0.57
Upk3b-201ENSMUST00000062606 Supt5hO55201 1082 aaKnown RBP18.57■□□□□ 0.56
Upk3b-201ENSMUST00000062606 Erich3F6QRE9 1637 aa18.57■□□□□ 0.56
Upk3b-201ENSMUST00000062606 Dnmt1P13864 1620 aaKnown RBP18.57■□□□□ 0.56
Upk3b-201ENSMUST00000062606 Abcc2Q8VI47 1543 aa18.54■□□□□ 0.56
Upk3b-201ENSMUST00000062606 Csrnp3P59055 597 aa18.52■□□□□ 0.56
Upk3b-201ENSMUST00000062606 WizO88286 1684 aaKnown RBP18.5■□□□□ 0.55
Upk3b-201ENSMUST00000062606 Zcchc11B2RX14 1644 aaKnown RBP18.5■□□□□ 0.55
Upk3b-201ENSMUST00000062606 Soga1E1U8D0 1418 aa18.46■□□□□ 0.55
Upk3b-201ENSMUST00000062606 Fgd6Q69ZL1 1399 aa18.44■□□□□ 0.54
Upk3b-201ENSMUST00000062606 Ankrd26Q811D2 1581 aa18.43■□□□□ 0.54
Upk3b-201ENSMUST00000062606 Clip1Q922J3 1391 aa18.41■□□□□ 0.54
Upk3b-201ENSMUST00000062606 Lmo7E9PYF4 1699 aaKnown RBP18.41■□□□□ 0.54
Upk3b-201ENSMUST00000062606 Slx4Q6P1D7 1565 aa18.41■□□□□ 0.54
Upk3b-201ENSMUST00000062606 Chd1P40201 1711 aa18.41■□□□□ 0.54
Upk3b-201ENSMUST00000062606 Fyco1Q8VDC1 1437 aa18.4■□□□□ 0.54
Upk3b-201ENSMUST00000062606 Plppr3Q7TPB0 716 aa18.39■□□□□ 0.53
Upk3b-201ENSMUST00000062606 Ifnlr1Q8CGK5 535 aa18.39■□□□□ 0.53
Upk3b-201ENSMUST00000062606 BC005561E9Q5E2 1589 aa18.39■□□□□ 0.53
Upk3b-201ENSMUST00000062606 Cux1P53564 1515 aa18.38■□□□□ 0.53
Upk3b-201ENSMUST00000062606 CadpsQ80TJ1 1355 aa18.38■□□□□ 0.53
Upk3b-201ENSMUST00000062606 PxdnQ3UQ28 1475 aa18.37■□□□□ 0.53
Upk3b-201ENSMUST00000062606 Rrbp1Q99PL5 1605 aaKnown RBP18.37■□□□□ 0.53
Upk3b-201ENSMUST00000062606 Arhgef12Q8R4H2 1543 aaKnown RBP18.37■□□□□ 0.53
Upk3b-201ENSMUST00000062606 Gm7298A0A0N4SVU1 1476 aa18.36■□□□□ 0.53
Upk3b-201ENSMUST00000062606 Peg3Q3URU2 1571 aa18.33■□□□□ 0.52
Upk3b-201ENSMUST00000062606 Abcc1O35379 1528 aa18.29■□□□□ 0.52
Upk3b-201ENSMUST00000062606 Col17a1Q07563 1470 aa18.29■□□□□ 0.52
Upk3b-201ENSMUST00000062606 BlmO88700 1416 aa18.28■□□□□ 0.52
Upk3b-201ENSMUST00000062606 Neo1P97798 1493 aa18.28■□□□□ 0.52
Upk3b-201ENSMUST00000062606 Kiaa1210E9Q0C6 1637 aa18.27■□□□□ 0.52
Upk3b-201ENSMUST00000062606 Npm2Q80W85 207 aa18.24■□□□□ 0.51
Upk3b-201ENSMUST00000062606 Aplp2Q06335 707 aa18.23■□□□□ 0.51
Upk3b-201ENSMUST00000062606 Cep170Q6A065 1588 aa18.2■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Pcf11G3X9Z4 1553 aa18.18■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Pabpn1Q8CCS6 302 aaKnown RBP18.18■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Eea1Q8BL66 1411 aa18.18■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Kdm5bQ80Y84 1544 aa18.16■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Arhgef5E9Q7D5 1581 aa18.16■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Anks4bQ8K3X6 423 aa18.15■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Wdr7Q920I9 1489 aa18.15■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Gab3Q8BSM5 595 aa18.15■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Gapvd1Q6PAR5 1458 aa18.14■□□□□ 0.5
Upk3b-201ENSMUST00000062606 Rapgef6Q5NCJ1 1609 aa18.14■□□□□ 0.49
Upk3b-201ENSMUST00000062606 Gm14025A2AP89 1413 aa18.13■□□□□ 0.49
Upk3b-201ENSMUST00000062606 Cul7Q8VE73 1689 aa18.13■□□□□ 0.49
Upk3b-201ENSMUST00000062606 NhsB1AV60 1647 aa18.12■□□□□ 0.49
Upk3b-201ENSMUST00000062606 Arap1Q4LDD4 1452 aa18.1■□□□□ 0.49
Upk3b-201ENSMUST00000062606 Pknox2Q8BG99 474 aa18.1■□□□□ 0.49
Upk3b-201ENSMUST00000062606 Setbp1Q9Z180 1582 aa18.1■□□□□ 0.49
Upk3b-201ENSMUST00000062606 Gcc2Q8CHG3 1679 aa18.09■□□□□ 0.49
Upk3b-201ENSMUST00000062606 Gm38655A0A286YDK6 273 aa18.08■□□□□ 0.49
Upk3b-201ENSMUST00000062606 Zeb1Q64318 1117 aa18.07■□□□□ 0.48
Upk3b-201ENSMUST00000062606 Tiam1Q60610 1591 aa18.07■□□□□ 0.48
Upk3b-201ENSMUST00000062606 AI481877A2ALV5 1481 aa18.07■□□□□ 0.48
Upk3b-201ENSMUST00000062606 Arhgef11Q68FM7 1552 aa18.05■□□□□ 0.48
Upk3b-201ENSMUST00000062606 CntlnA2AM05 1397 aa18.05■□□□□ 0.48
Upk3b-201ENSMUST00000062606 Ncoa2Q61026 1462 aa18.05■□□□□ 0.48
Upk3b-201ENSMUST00000062606 Adgrl3Q80TS3 1537 aa18.04■□□□□ 0.48
Upk3b-201ENSMUST00000062606 Mroh2aD3Z750 1679 aa18.03■□□□□ 0.48
Upk3b-201ENSMUST00000062606 Setd5Q5XJV7 1441 aa18.03■□□□□ 0.48
Upk3b-201ENSMUST00000062606 Ttbk1Q6PCN3 1308 aa18.03■□□□□ 0.48
Upk3b-201ENSMUST00000062606 PtprtQ99M80 1454 aa18.02■□□□□ 0.48
Upk3b-201ENSMUST00000062606 Ccdc141E9Q8Q6 1531 aa18.02■□□□□ 0.48
Upk3b-201ENSMUST00000062606 WrnO09053 1401 aa18.02■□□□□ 0.48
Upk3b-201ENSMUST00000062606 Ythdc2B2RR83 1445 aaKnown RBP18.01■□□□□ 0.47
Upk3b-201ENSMUST00000062606 Kiaa1551Q5DTW7 1521 aa18.01■□□□□ 0.47
Upk3b-201ENSMUST00000062606 AknaQ80VW7 1404 aa18.01■□□□□ 0.47
Upk3b-201ENSMUST00000062606 Cdc42bpaQ3UU96 1719 aa18■□□□□ 0.47
Upk3b-201ENSMUST00000062606 Pprc1Q6NZN1 1644 aa17.98■□□□□ 0.47
Upk3b-201ENSMUST00000062606 Igf1rQ60751 1373 aa17.98■□□□□ 0.47
Upk3b-201ENSMUST00000062606 CatipB9EKE5 520 aa17.98■□□□□ 0.47
Upk3b-201ENSMUST00000062606 Jph4Q80WT0 628 aa17.98■□□□□ 0.47
Upk3b-201ENSMUST00000062606 Dnajc5P60904 198 aa17.98■□□□□ 0.47
Upk3b-201ENSMUST00000062606 Arhgap27A2AB59 869 aa17.97■□□□□ 0.47
Upk3b-201ENSMUST00000062606 Abca8bQ8K440 1620 aa17.97■□□□□ 0.47
Upk3b-201ENSMUST00000062606 Fam208aQ69ZR9 1610 aaKnown RBP17.96■□□□□ 0.46
Upk3b-201ENSMUST00000062606 Gm1043A0A140LJC2 1431 aa17.95■□□□□ 0.46
Upk3b-201ENSMUST00000062606 Mapkbp1Q6NS57 1503 aa17.95■□□□□ 0.46
Upk3b-201ENSMUST00000062606 Lmtk2Q3TYD6 1471 aa17.94■□□□□ 0.46
Upk3b-201ENSMUST00000062606 Aebp1Q640N1 1128 aa17.94■□□□□ 0.46
Upk3b-201ENSMUST00000062606 Naip1Q9QWK5 1403 aa17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms