RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Gm35339A0A140LHH9 1649 aa25.96■■□□□ 1.75
Upk3b-201ENSMUST00000062606 NischQ80TM9 1593 aa25.23■■□□□ 1.63
Upk3b-201ENSMUST00000062606 Abcc9P70170 1546 aa24.65■■□□□ 1.54
Upk3b-201ENSMUST00000062606 Abcc8B2RUS7 1588 aa24.41■■□□□ 1.5
Upk3b-201ENSMUST00000062606 ScribQ80U72 1612 aa23.34■■□□□ 1.33
Upk3b-201ENSMUST00000062606 Dcaf1Q80TR8 1506 aa22.91■■□□□ 1.26
Upk3b-201ENSMUST00000062606 NacadQ5SWP3 1504 aa22.63■■□□□ 1.21
Upk3b-201ENSMUST00000062606 Kdm5dQ62240 1548 aa22.55■■□□□ 1.2
Upk3b-201ENSMUST00000062606 Ccdc180J3QNE4 1664 aa22.43■■□□□ 1.18
Upk3b-201ENSMUST00000062606 Sycp2Q9CUU3 1500 aa22.18■■□□□ 1.14
Upk3b-201ENSMUST00000062606 Rb1cc1Q9ESK9 1588 aa22.01■■□□□ 1.11
Upk3b-201ENSMUST00000062606 Crybg2B7ZCC2 1516 aa21.99■■□□□ 1.11
Upk3b-201ENSMUST00000062606 Baz1aO88379 1555 aa21.85■■□□□ 1.09
Upk3b-201ENSMUST00000062606 BicraF8VPZ9 1578 aa21.79■■□□□ 1.08
Upk3b-201ENSMUST00000062606 Rtl1Q7M732 1744 aa21.36■■□□□ 1.01
Upk3b-201ENSMUST00000062606 Smarca2Q6DIC0 1577 aa21.3■■□□□ 1
Upk3b-201ENSMUST00000062606 Rhox8Q6VSS7 320 aa21.26■□□□□ 0.99
Upk3b-201ENSMUST00000062606 Pds5bQ4VA53 1446 aaKnown RBP21.05■□□□□ 0.96
Upk3b-201ENSMUST00000062606 Zcchc6Q5BLK4 1491 aaKnown RBP20.98■□□□□ 0.95
Upk3b-201ENSMUST00000062606 Smarca4Q3TKT4 1613 aaKnown RBP20.96■□□□□ 0.95
Upk3b-201ENSMUST00000062606 Atad2bE9Q166 1460 aaKnown RBP20.94■□□□□ 0.94
Upk3b-201ENSMUST00000062606 Thoc2B1AZI6 1594 aaKnown RBP20.92■□□□□ 0.94
Upk3b-201ENSMUST00000062606 Cecr2E9Q2Z1 1453 aa20.73■□□□□ 0.91
Upk3b-201ENSMUST00000062606 Iqgap2Q3UQ44 1575 aa20.72■□□□□ 0.91
Upk3b-201ENSMUST00000062606 Baz1bQ9Z277 1479 aa20.69■□□□□ 0.9
Upk3b-201ENSMUST00000062606 Cttnbp2B9EJA2 1648 aa20.63■□□□□ 0.89
Upk3b-201ENSMUST00000062606 Wdr62Q3U3T8 1523 aa20.57■□□□□ 0.88
Upk3b-201ENSMUST00000062606 Fam135aQ6NS59 1506 aa20.52■□□□□ 0.88
Upk3b-201ENSMUST00000062606 Brd4Q9ESU6 1400 aaKnown RBP20.51■□□□□ 0.87
Upk3b-201ENSMUST00000062606 Ercc6F8VPZ5 1481 aa20.5■□□□□ 0.87
Upk3b-201ENSMUST00000062606 CftrP26361 1476 aa20.49■□□□□ 0.87
Upk3b-201ENSMUST00000062606 Synj1Q8CHC4 1574 aa20.45■□□□□ 0.86
Upk3b-201ENSMUST00000062606 Frmpd1A2AKB4 1549 aa20.42■□□□□ 0.86
Upk3b-201ENSMUST00000062606 Unc13aQ4KUS2 1712 aa20.36■□□□□ 0.85
Upk3b-201ENSMUST00000062606 Cc2d2aQ8CFW7 1633 aa20.34■□□□□ 0.85
Upk3b-201ENSMUST00000062606 Phldb1Q6PDH0 1371 aaKnown RBP20.18■□□□□ 0.82
Upk3b-201ENSMUST00000062606 Top2bQ64511 1612 aa20.09■□□□□ 0.81
Upk3b-201ENSMUST00000062606 Rpgrip1Q9EPQ2 1331 aa20.07■□□□□ 0.8
Upk3b-201ENSMUST00000062606 Pcgf6Q99NA9 353 aa20.07■□□□□ 0.8
Upk3b-201ENSMUST00000062606 DiexfQ8BTT6 772 aaKnown RBP20.02■□□□□ 0.8
Upk3b-201ENSMUST00000062606 Dnajc5bQ9CQ94 199 aa20.02■□□□□ 0.79
Upk3b-201ENSMUST00000062606 Trim41Q5NCC3 630 aa20■□□□□ 0.79
Upk3b-201ENSMUST00000062606 Lamc3Q9R0B6 1581 aa19.98■□□□□ 0.79
Upk3b-201ENSMUST00000062606 TnnQ80Z71 1560 aa19.98■□□□□ 0.79
Upk3b-201ENSMUST00000062606 Golga3P55937 1487 aa19.89■□□□□ 0.77
Upk3b-201ENSMUST00000062606 Ccdc136Q3TVA9 1136 aa19.84■□□□□ 0.77
Upk3b-201ENSMUST00000062606 Mrc2Q64449 1479 aa19.8■□□□□ 0.76
Upk3b-201ENSMUST00000062606 Rsf1E9PWW9 1441 aaKnown RBP19.74■□□□□ 0.75
Upk3b-201ENSMUST00000062606 Fmn1Q05860 1466 aa19.68■□□□□ 0.74
Upk3b-201ENSMUST00000062606 Ubl4bQ9CQ84 188 aa19.57■□□□□ 0.72
Upk3b-201ENSMUST00000062606 Camsap1A2AHC3 1581 aa19.55■□□□□ 0.72
Upk3b-201ENSMUST00000062606 Kif15Q6P9L6 1387 aa19.52■□□□□ 0.71
Upk3b-201ENSMUST00000062606 Cux2P70298 1426 aa19.51■□□□□ 0.71
Upk3b-201ENSMUST00000062606 Myt1Q8CFC2 1127 aa19.5■□□□□ 0.71
Upk3b-201ENSMUST00000062606 CenpbP27790 599 aa19.49■□□□□ 0.71
Upk3b-201ENSMUST00000062606 Kif21aQ9QXL2 1672 aa19.48■□□□□ 0.71
Upk3b-201ENSMUST00000062606 Esf1Q3V1V3 845 aaKnown RBP19.47■□□□□ 0.71
Upk3b-201ENSMUST00000062606 Top2aQ01320 1528 aaKnown RBP19.44■□□□□ 0.7
Upk3b-201ENSMUST00000062606 Bcl11aQ9QYE3 773 aa19.42■□□□□ 0.7
Upk3b-201ENSMUST00000062606 Ccdc18Q640L5 1455 aa19.42■□□□□ 0.7
Upk3b-201ENSMUST00000062606 Lrriq1Q0P5X1 1673 aa19.4■□□□□ 0.7
Upk3b-201ENSMUST00000062606 Gpatch8A2A6A1 1505 aa19.39■□□□□ 0.69
Upk3b-201ENSMUST00000062606 Cep164Q5DU05 1446 aa19.37■□□□□ 0.69
Upk3b-201ENSMUST00000062606 HrcG5E8J6 738 aa19.28■□□□□ 0.68
Upk3b-201ENSMUST00000062606 Eif4g3Q80XI3 1579 aaKnown RBP19.27■□□□□ 0.67
Upk3b-201ENSMUST00000062606 Grin2bQ01097 1482 aa19.27■□□□□ 0.67
Upk3b-201ENSMUST00000062606 NrkQ9R0G8 1455 aa19.26■□□□□ 0.67
Upk3b-201ENSMUST00000062606 PogzQ8BZH4 1409 aaKnown RBP19.25■□□□□ 0.67
Upk3b-201ENSMUST00000062606 Crocc2F6XLV1 1638 aa19.25■□□□□ 0.67
Upk3b-201ENSMUST00000062606 Ccdc88bQ4QRL3 1481 aa19.25■□□□□ 0.67
Upk3b-201ENSMUST00000062606 Pbrm1Q8BSQ9 1634 aaKnown RBP19.23■□□□□ 0.67
Upk3b-201ENSMUST00000062606 Las1lA2BE28 776 aaKnown RBP19.23■□□□□ 0.67
Upk3b-201ENSMUST00000062606 LrpprcQ6PB66 1392 aaKnown RBP19.23■□□□□ 0.67
Upk3b-201ENSMUST00000062606 Amer1Q7TS75 1132 aa19.23■□□□□ 0.67
Upk3b-201ENSMUST00000062606 Acin1Q9JIX8 1338 aaKnown RBP19.22■□□□□ 0.67
Upk3b-201ENSMUST00000062606 Efcab5A0JP43 1406 aa19.15■□□□□ 0.66
Upk3b-201ENSMUST00000062606 Dhx29Q6PGC1 1365 aaKnown RBP19.13■□□□□ 0.65
Upk3b-201ENSMUST00000062606 Urb2E9Q7L1 1524 aaKnown RBP19.12■□□□□ 0.65
Upk3b-201ENSMUST00000062606 Cngb1E1AZ71 1325 aa19.12■□□□□ 0.65
Upk3b-201ENSMUST00000062606 PrkcshO08795 521 aa19.11■□□□□ 0.65
Upk3b-201ENSMUST00000062606 Duox2A2AQ99 1517 aa19.1■□□□□ 0.65
Upk3b-201ENSMUST00000062606 Ift140E9PY46 1464 aa19.09■□□□□ 0.65
Upk3b-201ENSMUST00000062606 Npm1Q61937 292 aaKnown RBP19.08■□□□□ 0.65
Upk3b-201ENSMUST00000062606 Shroom4Q1W617 1475 aa19.08■□□□□ 0.65
Upk3b-201ENSMUST00000062606 Neurod1Q60867 357 aa19.07■□□□□ 0.64
Upk3b-201ENSMUST00000062606 Eif4g1Q6NZJ6 1600 aaKnown RBP19.03■□□□□ 0.64
Upk3b-201ENSMUST00000062606 1700123L14RikQ3V2K7 440 aa19.03■□□□□ 0.64
Upk3b-201ENSMUST00000062606 Samd9lQ69Z37 1561 aa19.03■□□□□ 0.64
Upk3b-201ENSMUST00000062606 Plb1Q3TTY0 1478 aa19.01■□□□□ 0.63
Upk3b-201ENSMUST00000062606 Rusc2Q80U22 1514 aa18.99■□□□□ 0.63
Upk3b-201ENSMUST00000062606 Setd1bQ8CFT2 1985 aa18.97■□□□□ 0.63
Upk3b-201ENSMUST00000062606 Nup160Q9Z0W3 1402 aaKnown RBP18.95■□□□□ 0.62
Upk3b-201ENSMUST00000062606 Map3k1P53349 1493 aa18.93■□□□□ 0.62
Upk3b-201ENSMUST00000062606 Disp1Q3TDN0 1521 aa18.92■□□□□ 0.62
Upk3b-201ENSMUST00000062606 Rapgef2Q8CHG7 1496 aa18.92■□□□□ 0.62
Upk3b-201ENSMUST00000062606 SynmQ70IV5 1561 aa18.91■□□□□ 0.62
Upk3b-201ENSMUST00000062606 AqrQ8CFQ3 1481 aaKnown RBP18.89■□□□□ 0.61
Upk3b-201ENSMUST00000062606 Chic1Q8CBW7 227 aa18.89■□□□□ 0.61
Upk3b-201ENSMUST00000062606 Magi3Q9EQJ9 1476 aa18.87■□□□□ 0.61
Upk3b-201ENSMUST00000062606 PtprkP35822 1457 aa18.86■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 173.8 ms