RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Hsp90ab1P11499 724 aaKnown RBP16.31■□□□□ 0.2
Vcpip1-201ENSMUST00000057438 Ifnlr1Q8CGK5 535 aa16.31■□□□□ 0.2
Vcpip1-201ENSMUST00000057438 Fgd1P52734 960 aa16.28■□□□□ 0.2
Vcpip1-201ENSMUST00000057438 CanxP35564 591 aaKnown RBP16.26■□□□□ 0.19
Vcpip1-201ENSMUST00000057438 Ccdc27Q3V036 639 aa16.25■□□□□ 0.19
Vcpip1-201ENSMUST00000057438 PtmaP26350 111 aa16.25■□□□□ 0.19
Vcpip1-201ENSMUST00000057438 Mrs2Q5NCE8 434 aa16.25■□□□□ 0.19
Vcpip1-201ENSMUST00000057438 Plppr3Q7TPB0 716 aa16.25■□□□□ 0.19
Vcpip1-201ENSMUST00000057438 Rad21Q61550 635 aaKnown RBP16.24■□□□□ 0.19
Vcpip1-201ENSMUST00000057438 Trim30dE9PWL0 497 aa16.23■□□□□ 0.19
Vcpip1-201ENSMUST00000057438 BlmO88700 1416 aa16.16■□□□□ 0.18
Vcpip1-201ENSMUST00000057438 Vsig10D3YX43 558 aa16.16■□□□□ 0.18
Vcpip1-201ENSMUST00000057438 Chmp4bQ9D8B3 224 aaKnown RBP16.16■□□□□ 0.18
Vcpip1-201ENSMUST00000057438 Ppm1gQ61074 542 aa16.16■□□□□ 0.18
Vcpip1-201ENSMUST00000057438 Znf326O88291 580 aa16.14■□□□□ 0.17
Vcpip1-201ENSMUST00000057438 Rangap1P46061 589 aaKnown RBP16.14■□□□□ 0.17
Vcpip1-201ENSMUST00000057438 Map7O88735 730 aa16.12■□□□□ 0.17
Vcpip1-201ENSMUST00000057438 Safb2Q80YR5 991 aaKnown RBP16.08■□□□□ 0.16
Vcpip1-201ENSMUST00000057438 PnnO35691 725 aaKnown RBP16.07■□□□□ 0.16
Vcpip1-201ENSMUST00000057438 Plcb2A3KGF7 1181 aa16.06■□□□□ 0.16
Vcpip1-201ENSMUST00000057438 Ofd1Q80Z25 1017 aa16.06■□□□□ 0.16
Vcpip1-201ENSMUST00000057438 Fam71e1A1L3C1 212 aa16.05■□□□□ 0.16
Vcpip1-201ENSMUST00000057438 Mbd3Q9Z2D8 285 aaKnown RBP16.04■□□□□ 0.16
Vcpip1-201ENSMUST00000057438 Cwc22Q8C5N3 908 aaKnown RBP16.03■□□□□ 0.16
Vcpip1-201ENSMUST00000057438 Zfp777B9EKF4 885 aa16.02■□□□□ 0.16
Vcpip1-201ENSMUST00000057438 Tnnt2P50752 301 aa16.02■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 Casc1Q6TDU8 730 aa16.01■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 PtmsQ9D0J8 101 aaKnown RBP15.99■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 Calcoco2A2A6M5 331 aa15.99■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 Chic2Q9D9G3 165 aa15.99■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 Setd5Q5XJV7 1441 aa15.98■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 Irx3P81067 507 aa15.98■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 IqubQ8CDK3 788 aa15.98■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 Fkbp15Q6P9Q6 1216 aaKnown RBP15.97■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 Trim26Q99PN3 545 aa15.97■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 AU015836B2RUM3 263 aa15.96■□□□□ 0.15
Vcpip1-201ENSMUST00000057438 Gm973E9Q295 1059 aa15.95■□□□□ 0.14
Vcpip1-201ENSMUST00000057438 1700123L14RikQ3V2K7 440 aa15.94■□□□□ 0.14
Vcpip1-201ENSMUST00000057438 KnstrnQ9D9Z1 312 aaKnown RBP15.93■□□□□ 0.14
Vcpip1-201ENSMUST00000057438 Mapk8ip3Q9ESN9 1337 aa15.91■□□□□ 0.14
Vcpip1-201ENSMUST00000057438 Eea1Q8BL66 1411 aa15.91■□□□□ 0.14
Vcpip1-201ENSMUST00000057438 MccE9PWI3 1003 aa15.91■□□□□ 0.14
Vcpip1-201ENSMUST00000057438 Rgl3Q3UYI5 709 aa15.91■□□□□ 0.14
Vcpip1-201ENSMUST00000057438 Iqcf3Q9D498 203 aa15.9■□□□□ 0.14
Vcpip1-201ENSMUST00000057438 Mia2Q91ZV0 1396 aa15.89■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 Wwc2Q6NXJ0 1187 aa15.89■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 Arid4bA2CG63 1314 aaKnown RBP15.88■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 NudcO35685 332 aaKnown RBP15.88■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 Exosc9Q9JHI7 438 aaKnown RBP15.87■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 Baz1aO88379 1555 aa15.86■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 Pes1Q9EQ61 584 aaKnown RBP15.86■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 Ccdc18Q640L5 1455 aa15.86■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 P3h3Q8CG70 732 aa15.85■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 Card11Q8CIS0 1159 aa15.84■□□□□ 0.13
Vcpip1-201ENSMUST00000057438 Mak16Q8BGS0 296 aaKnown RBP15.83■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 MsnP26041 577 aaKnown RBP15.82■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Bcl11aQ9QYE3 773 aa15.82■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Srpk2O54781 681 aaKnown RBP15.82■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Ubl4bQ9CQ84 188 aa15.82■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Pde3bQ61409 1100 aa15.8■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Erich6bQ9D4S6 220 aa15.8■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 SetQ9EQU5 289 aaKnown RBP15.79■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Gm6268A2A3U9 297 aa15.78■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 HnrnpuQ8VEK3 800 aaKnown RBP15.78■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Tcerg1Q8CGF7 1100 aaKnown RBP15.78■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Mtus2Q3UHD3 1353 aa15.78■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Rwdd1Q9CQK7 243 aa15.77■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Mroh3A0A1D5RM54 893 aa15.77■□□□□ 0.12
Vcpip1-201ENSMUST00000057438 Dnttip2Q8R2M2 758 aaKnown RBP15.77■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Golga3P55937 1487 aa15.77■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 4933402E13RikQ9D4D2 429 aa15.76■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Cald1E9QA15 768 aaKnown RBP15.76■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Fhad1A6PWD2 1420 aa15.76■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Znf316Q6PGE4 1016 aa15.75■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Apbb1Q9QXJ1 710 aa15.73■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Hsp90b1P08113 802 aaKnown RBP15.73■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 RdxP26043 583 aaKnown RBP15.73■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 NacadQ5SWP3 1504 aa15.73■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Kdm2aP59997 1161 aa15.72■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Dnai1Q8C0M8 701 aa15.72■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Rsf1E9PWW9 1441 aaKnown RBP15.72■□□□□ 0.11
Vcpip1-201ENSMUST00000057438 Gm20521D3Z5F7 333 aa15.7■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Rrp12Q6P5B0 1295 aaKnown RBP15.69■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Tpm3-rs7D3Z2H9 248 aa15.69■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Sh3bp5Q9Z131 463 aa15.69■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Eif4g2Q62448 906 aaKnown RBP15.69■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Neurod2Q62414 383 aa15.68■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Aebp2Q9Z248 504 aaKnown RBP15.68■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Irx6Q9ER75 438 aa15.68■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 EspnQ9ET47 871 aa15.68■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Ercc6F8VPZ5 1481 aa15.67■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Map7d2A2AG50 781 aa15.67■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Grwd1Q810D6 446 aaKnown RBP15.67■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Ipo9Q91YE6 1041 aa15.66■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Dnai2A2AC93 623 aa15.65■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 Smarce1O54941 411 aaKnown RBP15.65■□□□□ 0.1
Vcpip1-201ENSMUST00000057438 R3hcc1Q8BSI6 488 aa15.64■□□□□ 0.09
Vcpip1-201ENSMUST00000057438 Stag3O70576 1240 aa15.64■□□□□ 0.09
Vcpip1-201ENSMUST00000057438 Pcmtd1P59913 357 aa15.64■□□□□ 0.09
Vcpip1-201ENSMUST00000057438 Sart3Q9JLI8 962 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms