RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Cux2P70298 1426 aa20.87■□□□□ 0.93
Usp38-201ENSMUST00000042724 Gm13695A2AK44 830 aa20.86■□□□□ 0.93
Usp38-201ENSMUST00000042724 Nlrp6Q91WS2 869 aa20.85■□□□□ 0.93
Usp38-201ENSMUST00000042724 Cttnbp2B9EJA2 1648 aa20.82■□□□□ 0.92
Usp38-201ENSMUST00000042724 Prdm10Q3UTQ7 1184 aa20.77■□□□□ 0.92
Usp38-201ENSMUST00000042724 Anks4bQ8K3X6 423 aa20.75■□□□□ 0.91
Usp38-201ENSMUST00000042724 Plppr3Q7TPB0 716 aa20.74■□□□□ 0.91
Usp38-201ENSMUST00000042724 Mia2Q91ZV0 1396 aa20.73■□□□□ 0.91
Usp38-201ENSMUST00000042724 Mtus2Q3UHD3 1353 aa20.72■□□□□ 0.91
Usp38-201ENSMUST00000042724 Kif27Q7M6Z4 1394 aa20.72■□□□□ 0.91
Usp38-201ENSMUST00000042724 Rgl3Q3UYI5 709 aa20.7■□□□□ 0.9
Usp38-201ENSMUST00000042724 Baz1bQ9Z277 1479 aa20.7■□□□□ 0.9
Usp38-201ENSMUST00000042724 Aebp2Q9Z248 504 aaKnown RBP20.69■□□□□ 0.9
Usp38-201ENSMUST00000042724 Iqgap2Q3UQ44 1575 aa20.69■□□□□ 0.9
Usp38-201ENSMUST00000042724 Aebp1Q640N1 1128 aa20.68■□□□□ 0.9
Usp38-201ENSMUST00000042724 Myt1Q8CFC2 1127 aa20.67■□□□□ 0.9
Usp38-201ENSMUST00000042724 Rapgef2Q8CHG7 1496 aa20.62■□□□□ 0.89
Usp38-201ENSMUST00000042724 Anp32aO35381 247 aa20.62■□□□□ 0.89
Usp38-201ENSMUST00000042724 Carmil1Q6EDY6 1374 aa20.6■□□□□ 0.89
Usp38-201ENSMUST00000042724 Mrs2Q5NCE8 434 aa20.6■□□□□ 0.89
Usp38-201ENSMUST00000042724 Amer1Q7TS75 1132 aa20.6■□□□□ 0.89
Usp38-201ENSMUST00000042724 LrpprcQ6PB66 1392 aaKnown RBP20.6■□□□□ 0.89
Usp38-201ENSMUST00000042724 Rrp7aQ9D1C9 280 aaKnown RBP20.59■□□□□ 0.89
Usp38-201ENSMUST00000042724 Rpap1Q80TE0 1409 aa20.59■□□□□ 0.89
Usp38-201ENSMUST00000042724 CntlnA2AM05 1397 aa20.59■□□□□ 0.89
Usp38-201ENSMUST00000042724 Fyco1Q8VDC1 1437 aa20.57■□□□□ 0.88
Usp38-201ENSMUST00000042724 Safb2Q80YR5 991 aaKnown RBP20.56■□□□□ 0.88
Usp38-201ENSMUST00000042724 Rtl5Q5DTT4 599 aa20.53■□□□□ 0.88
Usp38-201ENSMUST00000042724 AknaQ80VW7 1404 aa20.51■□□□□ 0.87
Usp38-201ENSMUST00000042724 Polr3glQ8R0C0 218 aa20.5■□□□□ 0.87
Usp38-201ENSMUST00000042724 Csrnp3P59055 597 aa20.49■□□□□ 0.87
Usp38-201ENSMUST00000042724 4933416C03RikQ3V063 378 aa20.49■□□□□ 0.87
Usp38-201ENSMUST00000042724 Grwd1Q810D6 446 aaKnown RBP20.49■□□□□ 0.87
Usp38-201ENSMUST00000042724 Dhx29Q6PGC1 1365 aaKnown RBP20.48■□□□□ 0.87
Usp38-201ENSMUST00000042724 Mroh3A0A1D5RM54 893 aa20.48■□□□□ 0.87
Usp38-201ENSMUST00000042724 Upf2A2AT37 1269 aaKnown RBP20.45■□□□□ 0.86
Usp38-201ENSMUST00000042724 Card11Q8CIS0 1159 aa20.44■□□□□ 0.86
Usp38-201ENSMUST00000042724 Cwc22Q8C5N3 908 aaKnown RBP20.43■□□□□ 0.86
Usp38-201ENSMUST00000042724 Arhgap35Q91YM2 1499 aa20.43■□□□□ 0.86
Usp38-201ENSMUST00000042724 Calr4Q3TQS0 420 aa20.43■□□□□ 0.86
Usp38-201ENSMUST00000042724 P3h3Q8CG70 732 aa20.42■□□□□ 0.86
Usp38-201ENSMUST00000042724 Kdm2aP59997 1161 aa20.42■□□□□ 0.86
Usp38-201ENSMUST00000042724 Gm38655A0A286YDK6 273 aa20.41■□□□□ 0.86
Usp38-201ENSMUST00000042724 Hspa5P20029 655 aaKnown RBP20.4■□□□□ 0.86
Usp38-201ENSMUST00000042724 Srpk2O54781 681 aaKnown RBP20.39■□□□□ 0.85
Usp38-201ENSMUST00000042724 Rad21Q61550 635 aaKnown RBP20.38■□□□□ 0.85
Usp38-201ENSMUST00000042724 Dhx57Q6P5D3 1388 aaKnown RBP20.37■□□□□ 0.85
Usp38-201ENSMUST00000042724 Aplp2Q06335 707 aa20.37■□□□□ 0.85
Usp38-201ENSMUST00000042724 Map4P27546 1125 aaKnown RBP20.36■□□□□ 0.85
Usp38-201ENSMUST00000042724 IqubQ8CDK3 788 aa20.36■□□□□ 0.85
Usp38-201ENSMUST00000042724 Cabp1Q9JLK7 227 aa20.35■□□□□ 0.85
Usp38-201ENSMUST00000042724 Pkd2O35245 966 aa20.34■□□□□ 0.85
Usp38-201ENSMUST00000042724 Gm20521D3Z5F7 333 aa20.34■□□□□ 0.85
Usp38-201ENSMUST00000042724 Arid3cA6PWV5 409 aa20.3■□□□□ 0.84
Usp38-201ENSMUST00000042724 Stk24Q99KH8 431 aa20.28■□□□□ 0.84
Usp38-201ENSMUST00000042724 Efcab5A0JP43 1406 aa20.28■□□□□ 0.84
Usp38-201ENSMUST00000042724 Shroom4Q1W617 1475 aa20.26■□□□□ 0.83
Usp38-201ENSMUST00000042724 Mphosph9A6H5Y1 991 aa20.25■□□□□ 0.83
Usp38-201ENSMUST00000042724 Cc2d2aQ8CFW7 1633 aa20.25■□□□□ 0.83
Usp38-201ENSMUST00000042724 Top2aQ01320 1528 aaKnown RBP20.25■□□□□ 0.83
Usp38-201ENSMUST00000042724 Ppp4r2Q0VGB7 417 aa20.24■□□□□ 0.83
Usp38-201ENSMUST00000042724 Ccnb3Q810T2 1396 aa20.24■□□□□ 0.83
Usp38-201ENSMUST00000042724 Lemd3Q9WU40 921 aa20.24■□□□□ 0.83
Usp38-201ENSMUST00000042724 BicraF8VPZ9 1578 aa20.23■□□□□ 0.83
Usp38-201ENSMUST00000042724 Plekhh2Q8C115 1491 aa20.22■□□□□ 0.83
Usp38-201ENSMUST00000042724 Trak1Q6PD31 939 aa20.22■□□□□ 0.83
Usp38-201ENSMUST00000042724 Ppp1r18Q8BQ30 594 aa20.21■□□□□ 0.83
Usp38-201ENSMUST00000042724 Wdr43Q6ZQL4 677 aaKnown RBP20.19■□□□□ 0.82
Usp38-201ENSMUST00000042724 Exosc9Q9JHI7 438 aaKnown RBP20.19■□□□□ 0.82
Usp38-201ENSMUST00000042724 WrnO09053 1401 aa20.18■□□□□ 0.82
Usp38-201ENSMUST00000042724 Ofd1Q80Z25 1017 aa20.17■□□□□ 0.82
Usp38-201ENSMUST00000042724 Frmpd1A2AKB4 1549 aa20.16■□□□□ 0.82
Usp38-201ENSMUST00000042724 UacaQ8CGB3 1411 aa20.15■□□□□ 0.82
Usp38-201ENSMUST00000042724 Rangap1P46061 589 aaKnown RBP20.14■□□□□ 0.81
Usp38-201ENSMUST00000042724 NrkQ9R0G8 1455 aa20.13■□□□□ 0.81
Usp38-201ENSMUST00000042724 Stag3O70576 1240 aa20.13■□□□□ 0.81
Usp38-201ENSMUST00000042724 Rundc1Q0VDN7 615 aa20.12■□□□□ 0.81
Usp38-201ENSMUST00000042724 Nup155Q99P88 1391 aaKnown RBP20.11■□□□□ 0.81
Usp38-201ENSMUST00000042724 Duox2A2AQ99 1517 aa20.08■□□□□ 0.81
Usp38-201ENSMUST00000042724 Sart1Q9Z315 806 aaKnown RBP20.08■□□□□ 0.8
Usp38-201ENSMUST00000042724 Ifit1bl1D3Z6F0 470 aa20.06■□□□□ 0.8
Usp38-201ENSMUST00000042724 Polr1aO35134 1717 aaKnown RBP20.06■□□□□ 0.8
Usp38-201ENSMUST00000042724 Rad54l2Q99NG0 1466 aa20.05■□□□□ 0.8
Usp38-201ENSMUST00000042724 DaxxO35613 739 aa20.04■□□□□ 0.8
Usp38-201ENSMUST00000042724 Sin3aQ60520 1274 aaKnown RBP20.04■□□□□ 0.8
Usp38-201ENSMUST00000042724 Jph4Q80WT0 628 aa20.04■□□□□ 0.8
Usp38-201ENSMUST00000042724 Grin2bQ01097 1482 aa20.03■□□□□ 0.8
Usp38-201ENSMUST00000042724 Urb2E9Q7L1 1524 aaKnown RBP20.03■□□□□ 0.8
Usp38-201ENSMUST00000042724 Kif3bQ61771 747 aa20.02■□□□□ 0.8
Usp38-201ENSMUST00000042724 PogzQ8BZH4 1409 aaKnown RBP20.02■□□□□ 0.8
Usp38-201ENSMUST00000042724 Fhad1A6PWD2 1420 aa20.01■□□□□ 0.79
Usp38-201ENSMUST00000042724 Ncoa2Q61026 1462 aa20.01■□□□□ 0.79
Usp38-201ENSMUST00000042724 Mrc2Q64449 1479 aa20■□□□□ 0.79
Usp38-201ENSMUST00000042724 Wwc2Q6NXJ0 1187 aa20■□□□□ 0.79
Usp38-201ENSMUST00000042724 Map3k1P53349 1493 aa19.99■□□□□ 0.79
Usp38-201ENSMUST00000042724 MyclP10166 368 aa19.99■□□□□ 0.79
Usp38-201ENSMUST00000042724 Soga1E1U8D0 1418 aa19.99■□□□□ 0.79
Usp38-201ENSMUST00000042724 Trim26Q99PN3 545 aa19.99■□□□□ 0.79
Usp38-201ENSMUST00000042724 ArxO35085 564 aa19.99■□□□□ 0.79
Usp38-201ENSMUST00000042724 Cux1P53564 1515 aa19.98■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms