RNA–Protein interactions for RNA: ENSMUST00000040964.12

Ss18-202, Transcript of Protein SSXT, mousemouse

TSL 1 (best) BASIC

Gene Ss18, Length 4,153 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18-202ENSMUST00000040964 Plb1Q3TTY0 1478 aa16.74■□□□□ 0.27
Ss18-202ENSMUST00000040964 BlmO88700 1416 aa16.74■□□□□ 0.27
Ss18-202ENSMUST00000040964 Ccer2J3QPU5 274 aa16.71■□□□□ 0.27
Ss18-202ENSMUST00000040964 Dnajc5bQ9CQ94 199 aa16.71■□□□□ 0.27
Ss18-202ENSMUST00000040964 Plekhg3Q4VAC9 1341 aa16.71■□□□□ 0.27
Ss18-202ENSMUST00000040964 Eif4g1Q6NZJ6 1600 aaKnown RBP16.71■□□□□ 0.27
Ss18-202ENSMUST00000040964 Cdk11bP24788 784 aaKnown RBP16.71■□□□□ 0.27
Ss18-202ENSMUST00000040964 Cux1P53564 1515 aa16.66■□□□□ 0.26
Ss18-202ENSMUST00000040964 Dhx57Q6P5D3 1388 aaKnown RBP16.65■□□□□ 0.26
Ss18-202ENSMUST00000040964 Rad54l2Q99NG0 1466 aa16.65■□□□□ 0.26
Ss18-202ENSMUST00000040964 Mier1Q5UAK0 511 aa16.65■□□□□ 0.26
Ss18-202ENSMUST00000040964 EprsQ8CGC7 1512 aaKnown RBP16.64■□□□□ 0.26
Ss18-202ENSMUST00000040964 Aebp1Q640N1 1128 aa16.64■□□□□ 0.25
Ss18-202ENSMUST00000040964 Kif27Q7M6Z4 1394 aa16.64■□□□□ 0.25
Ss18-202ENSMUST00000040964 Grin2aP35436 1464 aa16.64■□□□□ 0.25
Ss18-202ENSMUST00000040964 TchhA0A0B4J1F9 1599 aa16.62■□□□□ 0.25
Ss18-202ENSMUST00000040964 NclP09405 707 aaKnown RBP16.62■□□□□ 0.25
Ss18-202ENSMUST00000040964 Arhgef5E9Q7D5 1581 aa16.62■□□□□ 0.25
Ss18-202ENSMUST00000040964 Samd9lQ69Z37 1561 aa16.61■□□□□ 0.25
Ss18-202ENSMUST00000040964 Arhgap27A2AB59 869 aa16.6■□□□□ 0.25
Ss18-202ENSMUST00000040964 Ube2uB1AUC4 352 aa16.6■□□□□ 0.25
Ss18-202ENSMUST00000040964 Gm7298A0A0N4SVU1 1476 aa16.58■□□□□ 0.24
Ss18-202ENSMUST00000040964 Disp1Q3TDN0 1521 aa16.57■□□□□ 0.24
Ss18-202ENSMUST00000040964 Ncoa2Q61026 1462 aa16.56■□□□□ 0.24
Ss18-202ENSMUST00000040964 Lmod2Q3UHZ5 550 aa16.56■□□□□ 0.24
Ss18-202ENSMUST00000040964 Mia2Q91ZV0 1396 aa16.56■□□□□ 0.24
Ss18-202ENSMUST00000040964 Erich3F6QRE9 1637 aa16.56■□□□□ 0.24
Ss18-202ENSMUST00000040964 Nup160Q9Z0W3 1402 aaKnown RBP16.55■□□□□ 0.24
Ss18-202ENSMUST00000040964 Tiam1Q60610 1591 aa16.54■□□□□ 0.24
Ss18-202ENSMUST00000040964 Soga1E1U8D0 1418 aa16.53■□□□□ 0.24
Ss18-202ENSMUST00000040964 Ankrd26Q811D2 1581 aa16.53■□□□□ 0.24
Ss18-202ENSMUST00000040964 CadpsQ80TJ1 1355 aa16.53■□□□□ 0.24
Ss18-202ENSMUST00000040964 Arap1Q4LDD4 1452 aa16.53■□□□□ 0.24
Ss18-202ENSMUST00000040964 Fam50aQ9WV03 339 aaKnown RBP16.52■□□□□ 0.24
Ss18-202ENSMUST00000040964 Fgd6Q69ZL1 1399 aa16.52■□□□□ 0.23
Ss18-202ENSMUST00000040964 Pla2r1Q62028 1487 aa16.51■□□□□ 0.23
Ss18-202ENSMUST00000040964 Lrriq1Q0P5X1 1673 aa16.5■□□□□ 0.23
Ss18-202ENSMUST00000040964 Naip1Q9QWK5 1403 aa16.48■□□□□ 0.23
Ss18-202ENSMUST00000040964 Hdac5Q9Z2V6 1113 aa16.47■□□□□ 0.23
Ss18-202ENSMUST00000040964 Magi3Q9EQJ9 1476 aa16.47■□□□□ 0.23
Ss18-202ENSMUST00000040964 Peg3Q3URU2 1571 aa16.46■□□□□ 0.23
Ss18-202ENSMUST00000040964 Rusc2Q80U22 1514 aa16.45■□□□□ 0.22
Ss18-202ENSMUST00000040964 Eif4g3Q80XI3 1579 aaKnown RBP16.45■□□□□ 0.22
Ss18-202ENSMUST00000040964 Pcf11G3X9Z4 1553 aa16.44■□□□□ 0.22
Ss18-202ENSMUST00000040964 WrnO09053 1401 aa16.44■□□□□ 0.22
Ss18-202ENSMUST00000040964 AknaQ80VW7 1404 aa16.42■□□□□ 0.22
Ss18-202ENSMUST00000040964 Adamts12Q811B3 1600 aa16.39■□□□□ 0.22
Ss18-202ENSMUST00000040964 TonslQ6NZL6 1363 aa16.39■□□□□ 0.21
Ss18-202ENSMUST00000040964 Gpatch8A2A6A1 1505 aa16.39■□□□□ 0.21
Ss18-202ENSMUST00000040964 UacaQ8CGB3 1411 aa16.38■□□□□ 0.21
Ss18-202ENSMUST00000040964 Abca5Q8K448 1642 aa16.37■□□□□ 0.21
Ss18-202ENSMUST00000040964 Jph4Q80WT0 628 aa16.37■□□□□ 0.21
Ss18-202ENSMUST00000040964 Clstn2Q9ER65 966 aa16.36■□□□□ 0.21
Ss18-202ENSMUST00000040964 WizO88286 1684 aaKnown RBP16.34■□□□□ 0.21
Ss18-202ENSMUST00000040964 Ccdc141E9Q8Q6 1531 aa16.33■□□□□ 0.21
Ss18-202ENSMUST00000040964 Mtus2Q3UHD3 1353 aa16.33■□□□□ 0.2
Ss18-202ENSMUST00000040964 Fam163aQ8CAA5 168 aa16.32■□□□□ 0.2
Ss18-202ENSMUST00000040964 Lmo7E9PYF4 1699 aaKnown RBP16.32■□□□□ 0.2
Ss18-202ENSMUST00000040964 Pelp1Q9DBD5 1123 aaKnown RBP16.32■□□□□ 0.2
Ss18-202ENSMUST00000040964 Gm14025A2AP89 1413 aa16.3■□□□□ 0.2
Ss18-202ENSMUST00000040964 Ccnb3Q810T2 1396 aa16.3■□□□□ 0.2
Ss18-202ENSMUST00000040964 Arhgap31A6X8Z5 1425 aa16.27■□□□□ 0.2
Ss18-202ENSMUST00000040964 Plekhh2Q8C115 1491 aa16.27■□□□□ 0.19
Ss18-202ENSMUST00000040964 Pabpn1Q8CCS6 302 aaKnown RBP16.26■□□□□ 0.19
Ss18-202ENSMUST00000040964 Fhad1A6PWD2 1420 aa16.26■□□□□ 0.19
Ss18-202ENSMUST00000040964 Wdr66E9Q743 1299 aa16.26■□□□□ 0.19
Ss18-202ENSMUST00000040964 Ncapd3Q6ZQK0 1506 aa16.25■□□□□ 0.19
Ss18-202ENSMUST00000040964 Shroom2A2ALU4 1481 aa16.25■□□□□ 0.19
Ss18-202ENSMUST00000040964 Rapgef6Q5NCJ1 1609 aa16.24■□□□□ 0.19
Ss18-202ENSMUST00000040964 Fkbp15Q6P9Q6 1216 aaKnown RBP16.24■□□□□ 0.19
Ss18-202ENSMUST00000040964 Rrbp1Q99PL5 1605 aaKnown RBP16.23■□□□□ 0.19
Ss18-202ENSMUST00000040964 Igf1rQ60751 1373 aa16.23■□□□□ 0.19
Ss18-202ENSMUST00000040964 PxdnQ3UQ28 1475 aa16.22■□□□□ 0.19
Ss18-202ENSMUST00000040964 Map3k4O08648 1597 aa16.22■□□□□ 0.19
Ss18-202ENSMUST00000040964 Slx4Q6P1D7 1565 aa16.22■□□□□ 0.19
Ss18-202ENSMUST00000040964 Mug1P28665 1476 aa16.21■□□□□ 0.19
Ss18-202ENSMUST00000040964 Vps8Q0P5W1 1427 aa16.21■□□□□ 0.18
Ss18-202ENSMUST00000040964 Magi1Q6RHR9 1471 aa16.2■□□□□ 0.18
Ss18-202ENSMUST00000040964 Caskin1Q6P9K8 1431 aa16.19■□□□□ 0.18
Ss18-202ENSMUST00000040964 Gm1043A0A140LJC2 1431 aa16.19■□□□□ 0.18
Ss18-202ENSMUST00000040964 Abca16E9PWJ7 1678 aa16.19■□□□□ 0.18
Ss18-202ENSMUST00000040964 Neo1P97798 1493 aa16.18■□□□□ 0.18
Ss18-202ENSMUST00000040964 Mlh3A0A1Y7VMP7 1443 aa16.18■□□□□ 0.18
Ss18-202ENSMUST00000040964 Wdr7Q920I9 1489 aa16.17■□□□□ 0.18
Ss18-202ENSMUST00000040964 Ankrd36D3Z4K0 1415 aa16.15■□□□□ 0.18
Ss18-202ENSMUST00000040964 Lmtk2Q3TYD6 1471 aa16.15■□□□□ 0.18
Ss18-202ENSMUST00000040964 Rfx7F8VPJ6 1459 aa16.15■□□□□ 0.18
Ss18-202ENSMUST00000040964 NexmifQ5DTT1 1515 aa16.14■□□□□ 0.17
Ss18-202ENSMUST00000040964 Fancd2Q80V62 1450 aa16.13■□□□□ 0.17
Ss18-202ENSMUST00000040964 Il16O54824 1322 aa16.12■□□□□ 0.17
Ss18-202ENSMUST00000040964 Chic2Q9D9G3 165 aa16.1■□□□□ 0.17
Ss18-202ENSMUST00000040964 Arhgef12Q8R4H2 1543 aaKnown RBP16.09■□□□□ 0.17
Ss18-202ENSMUST00000040964 Abcc1O35379 1528 aa16.08■□□□□ 0.17
Ss18-202ENSMUST00000040964 Gcc2Q8CHG3 1679 aa16.08■□□□□ 0.16
Ss18-202ENSMUST00000040964 Abcc2Q8VI47 1543 aa16.06■□□□□ 0.16
Ss18-202ENSMUST00000040964 Dnmt1P13864 1620 aaKnown RBP16.05■□□□□ 0.16
Ss18-202ENSMUST00000040964 Naip2Q9QUK4 1447 aa16.04■□□□□ 0.16
Ss18-202ENSMUST00000040964 BC005561E9Q5E2 1589 aa16.03■□□□□ 0.16
Ss18-202ENSMUST00000040964 Prdm16A2A935 1275 aa16.03■□□□□ 0.16
Ss18-202ENSMUST00000040964 ClspnQ80YR7 1315 aa16.02■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms